Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0573 ATGGAGCTACATAATATTAATGATGACCCTGCAAGCTCTGAACTTACTAGGGTCCAGGAGAAGTTGAAAGCACAAAGAAGTCGTCATAAGAGTATGCAGTTTGAAGATAATTTACAGCATGACGATAATCCAAGGTTGATCTACATCAATGATCCAAGAAAAACTAATGATAAGTATGAGTTCACAGGAAATGAGATAACCACTAGCAAGTACACATTGATTACCTTCCTACCAAAGAACCTCTTTATTCAGTTCCACCGTGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTTAACCAGCTTCCGCCTTTGGCAGTCTTTGGGAGGACGGTATCTCTTTTTCCTCTCCTGTTTGTGCTCTGTGTTACAGCTATTAAAGATGGCTATGAGGATTGGCGTAGACACAGATCAGACCGCAATGAGAATAATAAACAGGCTCTGGTGTATCAATCTGATGAATTCCGATTGAAAGTCTGGAAAAAAATACGAGCTGGTGAAGTTGTAAAGATTTTTGCAGATGAGGTTATTCCTTGTGACATGGTTTTATTGGGGACAAGTGATCCTAGTGGCCTTGCTTATATCCAAACAATGAATTTGGATGGTGAGTCGAACTTGAAGACAAGGTATGCTAGGCAGGAAACAGCATCGGCAGTAGTAGAGGGATGTTTGTATTCGGGTCTTATTCGGTGTGAACAGCCTAACAGGAACATTTATGAGTTCACTGCTAATATGGAGTTCAACAGCCACAAATTTCCCCTCAGCCAGTCAAACATAGTTTTGCGAGGTTGTCAGCTGAAGAACACTGAATGGATTATTGGTGTGGTTGTATATGCTGGACAAGAGACAAAAGCCATGTTAAATAGTGCAGTATCTCCTGCAAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACCTTGTGGTTGTCGATCTTTCTCTTCATCATGTGTCTAGTTGTGGCCCTTGGAATGGGATCATGGCTTGTTCGTCACAAGGAACGTCTTGATATCTTGCCATATTATAGGAAAAGGTATTTCACAAACGGGGCTGATAATGGTAAGAAGTATAAGTTTTATGGAATACCTATGGAGACCTTTTTCTCCTTTTTGAGCTCTATTATAGTGTTTCAGATTATGATACCGATATCCCTTTATATTACGATGGAGATGGTTAGACTGGGCCAGTCATATTTCATGATTGAAGATGAGCACATGTACTGCAAAATCTCTAGTTCAAGGTTTCAGTGCAGATCATTAAATATCAACGAGGATCTTGGTCAAGTTCGCTACATCTTTTCGGACAAAACAGGAACACTCACTGAAAATAAAATGGAATTCAAAAGAGCAAGTGTGTATGGAAAGAAATATGGGAACAACTTGTCTGAGGGATATCCGTCAATGGTGTATTCCCTTCCAGCAACTTTAGGGAGGAGGAGGAGGTGGAAACTTAAATCTACCATTTCTGTTGATACTGAACTTGTCAAATTACTGCACAAGGACCTAAATGGAGATGAAAAAATCGCTGCACATGAGTTTTTTCTTGCATTGGCTGCATGCAATACTGTTATTCCTATTGTCACGGATAACAAATCTAGTTCTGTGAATGGTGAATTGCACGAGGATTGTGAAACTATTAAGTATCAGGGGGAATCCCCGGACGAGCAAGCACTAGTTGCTGCAGCCTCAGCTTATGGATATACCCTTTTTGAGCGCACAACCGGGCATATTGTTATCGATGTCAATGGTGAGAACTTAAGGTTAGACGTTTTGGGTTTACATGAGTTCGATAGTGTTCGCAAAAGAATGTCCGTTGTCATCAAATTCCCCAACAACACTATAAAGGTGCTGGTAAAAGGCGCTGATACTTCGATGCTGAATAGTTTGGGCATCGACTCTGACAGTGAAGAACTTATCAAGCATACTACTCAGAGCCATTTGGGTGAATATTCAATGGAAGGTTTGCGAACACTTGTAGTTGCTTCCAGAGATCTGAGAGATCCTGAATTTGAGCATTGGCAGAGCAGATATGAGGATGCTAGTACTTCACTTACCGAAAGAGCCGTAAAACTACGTCAAACAGCAGCCCTTATAGAACGTGACCTAAAGCTTTTAGGTGCGACTGCTATTGAGGACAAACTCCAAGATGGAGTACCGGAAGCCATTGAATCTCTTCGGCAGGCGGGAATAAAGGTTTGGATTCTGACCGGAGATAAGCAGGAGACGGCCATATCAATCAGTCTCTCCTGCAAACTGCTGACTTCAGACATGCAGTCAATTATAATCAATGGAAATTCCGAGAATGAATGCAGACAACTTTTAGGTGATGCAATAGAAAAATTTGGCATTAAATCAACACAGGACGGAAGCCAAAGACAGAACAATTGTGAGAATGACTGTCATGATATGCCGAAGACATTGCCAAATGTTAATGGAGTGAAAGGAGTCACTGATAAACCACTAGCTTTAATAATTGATGGAAACAGTTTGGTGTACATTTTGGAGAAGGAATTGGAGTCAAAGCTTTTTGACCTTGCAACTTCATGCCATGTTGTTCTATGCTGTCGTGTTGCACCTCTGCAGAAAGCTGGAATTGTTGATTTGATCAAGAGTAGAACTGATGATATGACATTGGCGATCGGAGATGGGGCCAATGATGTTTCAATGATTCAGATGGCAGATGTAGGCATTGGTATATGTGGACAGGAAGGGCGTCAAGCAGTTATGGCATCTGATTTTGCCATGGGGCAGTTTCGATTTTTAAAAAGATTACTTCTAGTGCATGGACATTGGAACTATCAACGCGTAGGCTACATGGTTCTGTACAACTTTTACCGCAATGCTGTTTTCGTCATGATGCTCTTCTGGTACATTCTATGTACAGCGTTCTCAACAACTTCAGCTTTGACTGATTGGAGTAGTGTGCTTTACTCTGTTATCTATACCTCTATCCCTACTATTTTTGTTGGTATTCTGGACAAAGGCTTGAGTGACAAGACTTTACTACAGTATCCTAAGCTCTATAGTGCTGGTTATAGACAGGAGGCTTACAATTTGCGTCTCTTTTGGCTCACAATGCTTGATACCCTGTGGCAGAGTCTCGTTCTCTTCTATGTGCCATTATACATTTACAAGGAGAGTACCATTGATATATGGAGCTTAGGAAGCTTATGGACCATTGCTGTTGCCATCCTTGTGAATGTGCACTTGGCCATGGATGTTCAACGTTGGGTATATATCACCCATGCTGCCGTTTGGGGATCCATAGTCATAACTTATGCCTGCATGGTGGTTTTGGATTCTATTCCCGTTTTTCCTAATTACTGGACGATCTTTCATCTGGCCAAGTCCCCAACCTATTGGTTGACTATATTGCTCATAATAGTTGTAGCATTGCTTCCGCGCTATCTTTTTAAAGTTATCAACCAAAAGTTTTGGCCCTCAGATATTCAGATAGCCAGAGAAGCCGAGGTACTCGGGAAACGAAAAGGTCGCAAACATGAGGATTCAAAGCGAGATCAAGATTCCAATTGA 3534 41.37 MELHNINDDPASSELTRVQEKLKAQRSRHKSMQFEDNLQHDDNPRLIYINDPRKTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNKQALVYQSDEFRLKVWKKIRAGEVVKIFADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETASAVVEGCLYSGLIRCEQPNRNIYEFTANMEFNSHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAVSPAKRSKLEGYMNRETLWLSIFLFIMCLVVALGMGSWLVRHKERLDILPYYRKRYFTNGADNGKKYKFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDEHMYCKISSSRFQCRSLNINEDLGQVRYIFSDKTGTLTENKMEFKRASVYGKKYGNNLSEGYPSMVYSLPATLGRRRRWKLKSTISVDTELVKLLHKDLNGDEKIAAHEFFLALAACNTVIPIVTDNKSSSVNGELHEDCETIKYQGESPDEQALVAAASAYGYTLFERTTGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIKFPNNTIKVLVKGADTSMLNSLGIDSDSEELIKHTTQSHLGEYSMEGLRTLVVASRDLRDPEFEHWQSRYEDASTSLTERAVKLRQTAALIERDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISISLSCKLLTSDMQSIIINGNSENECRQLLGDAIEKFGIKSTQDGSQRQNNCENDCHDMPKTLPNVNGVKGVTDKPLALIIDGNSLVYILEKELESKLFDLATSCHVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGIGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVMMLFWYILCTAFSTTSALTDWSSVLYSVIYTSIPTIFVGILDKGLSDKTLLQYPKLYSAGYRQEAYNLRLFWLTMLDTLWQSLVLFYVPLYIYKESTIDIWSLGSLWTIAVAILVNVHLAMDVQRWVYITHAAVWGSIVITYACMVVLDSIPVFPNYWTIFHLAKSPTYWLTILLIIVVALLPRYLFKVINQKFWPSDIQIAREAEVLGKRKGRKHEDSKRDQDSN 1177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5720843 5729091 + Sed0020391.1 Sed14g0573 736291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0573 1177 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1148 IPR032630 -
Sed14g0573 1177 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 718 IPR023299 GO:0000166(InterPro)
Sed14g0573 1177 ProSitePatterns E1-E2 ATPases phosphorylation site. 435 441 IPR018303 -
Sed14g0573 1177 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 36 1156 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Sed14g0573 1177 CDD P-type_ATPase_APLT_Dnf-like 63 1040 - -
Sed14g0573 1177 Pfam E1-E2 ATPase 145 390 - -
Sed14g0573 1177 Gene3D - 706 920 IPR023214 -
Sed14g0573 1177 Gene3D - 430 442 IPR023214 -
Sed14g0573 1177 Pfam Cation transport ATPase (P-type) 548 627 - -
Sed14g0573 1177 NCBIfam phospholipid-translocating P-type ATPase 61 1155 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Sed14g0573 1177 SUPERFAMILY Calcium ATPase, transduction domain A 144 285 IPR008250 -
Sed14g0573 1177 Gene3D - 123 289 - -
Sed14g0573 1177 SFLD p-type atpase 417 931 IPR044492 -
Sed14g0573 1177 FunFam Phospholipid-transporting ATPase IC 430 442 - -
Sed14g0573 1177 SUPERFAMILY Calcium ATPase, transmembrane domain M 61 1147 IPR023298 -
Sed14g0573 1177 SUPERFAMILY HAD-like 420 925 IPR036412 -
Sed14g0573 1177 Gene3D - 443 455 IPR023299 GO:0000166(InterPro)
Sed14g0573 1177 Pfam haloacid dehalogenase-like hydrolase 675 746 - -
Sed14g0573 1177 Gene3D - 545 705 IPR023299 GO:0000166(InterPro)
Sed14g0573 1177 FunFam Phospholipid-transporting ATPase 701 920 - -
Sed14g0573 1177 NCBIfam HAD-IC family P-type ATPase 366 459 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0573 1177 NCBIfam HAD-IC family P-type ATPase 850 966 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0573 1177 NCBIfam HAD-IC family P-type ATPase 697 753 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0573 1177 SFLD C1.7: P-type atpase like 417 931 - -
Sed14g0573 1177 Gene3D - 410 429 - -
Sed14g0573 1177 Pfam Phospholipid-translocating ATPase N-terminal 47 112 IPR032631 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2443 Sed-Chr3:21958870 Sed14g0573 Sed-Chr14:5720843 0.00E+00 dispersed
Sed04g3375 Sed-Chr4:43756772 Sed14g0573 Sed-Chr14:5720843 2.70E-159 dispersed
Sed05g1937 Sed-Chr5:32731390 Sed14g0573 Sed-Chr14:5720843 1.90E-160 dispersed
Sed11g1421 Sed-Chr11:30093994 Sed14g0573 Sed-Chr14:5720843 5.10E-180 dispersed
Sed11g1422 Sed-Chr11:30107393 Sed14g0573 Sed-Chr14:5720843 0.00E+00 dispersed
Sed11g1728 Sed-Chr11:32384420 Sed14g0573 Sed-Chr14:5720843 5.30E-185 dispersed
Sed11g1729 Sed-Chr11:32384420 Sed14g0573 Sed-Chr14:5720843 5.30E-185 dispersed
Sed14g0573 Sed-Chr14:5720843 Sed14g0918 Sed-Chr14:18280057 3.80E-10 dispersed
Sed14g0573 Sed-Chr14:5720843 Sed14g0574 Sed-Chr14:5720843 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0573 K14802 - csv:101206692 2112.81