Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0580 ATGGCACATCCAATTCAATATGCTGAAACTGATCCATCTCGTCGCTATGGACGGTTTAAAGAAATTTTAGGAAAAGGAGCCATGAAGACAGTATACAAAGCCTTTGATGAAATGCTTGGACTAGAGGTAGCTTGGAACCAAGTTCAGCTCAAAGATGTCTTCCATTCCCATGAAGAACTACAACACCTTTACTCTGAAGTTCATCTCCTCAAGAACCTCGACCACGACTCGGTCATCCGATTCCACGCTTCGTGGATCGATACTCAACACCGAACCTTCAACTTCATCACCGAAATGTTCACCTCGGGCACCCTTAGAGAGTACCGACAAAAGTATCGAAATGTCGACATCCGTGTAATCAAGAATTGGGCTCGTCAAATCCTACGCGGATTAGCGTATCTTCACGGCCATGATCCTCCTGTGATTCATAGAGATCTCAAGTGTGATAACATATTTATCAATGGCCATCTTGGACAAGTTAAAATTGGTGATTTGGGACTCGCTACAATCCTTCGTGATTCTCAACATGCTCACAGCGTCATAGGTACACCAGAGTTCATGGCACCAGAGCTTTATGATGAGGACTATGATGAGCTTGTAGATGTTTATTCCTTTGGGATGTGTTTGATAGAGATGCTTACTTTGGAATTTCCGTATAGCGAGTGCTCGAACCCCGCTCAGATATACAAGAAAGTCACTTCGGGAAAATTGCCCAATGCATTGTACAAGATCAAAGACATGGAGGCCCAAAGATTTGTGATGAAGTGTTTGGAGAATGTTTCAAAAAGGCTGCCTGCTAAAGAGCTGTTGCTTGATCCATTTCTAGCTTCCAATGACAATGTTCATGAAAATAATGATGAAGGGCATTTGTGTAATTTGGCTGTAACTTCACCTGCAAGAAATAGAAGAACAGACATGGCCATTTCTGGATCAATGTGTCCCAAGGATCATACTGTTATCCAGCTCAAAGTTCAGATTCAAGTCAAGAATGGTAAAGCGAATAACGTATACTTTGCATTCGACACCCTAAACGACACTGCGATCGACGTAGCAACCGAGATGGTAAGAGAGTTGGAAATAAGAGACTGGGATCCAATGGAGATTGCTATGATGATAAAGAAGGAGATATCTACATTGATTCCAAATTGGAAGGAATGGAACTTCCCCCAAAGCCACCATCAAGATAGCGTCAACTACGAAGATGAAAATGAAAACGAGAATGACAATGACAATGACAATAACAACAACAACGATGACGATGAAAACGATAATGTAACACCACATCCTTTCTACTCTTGCTCCTCTCATGCATCCTCCTCAAATTCTCTTCAAGGTCTCTACTCTTTTTATGACTATGAGTATTATTATGGAAGTAGAAATGAAACCTCTACTGCCCCTCAATGGTTTCAAGAGGAATTTATGATTGATGAGGATGCAAGTTCTAGCTGCTCGCTAAACTCTTTCAATTATTCTGATATAAGCTTTTGCTCAATCAATGAAGACGAGTATGAATGTGACTCACATCTCAAAGGAAGGGACTCAACAAACCAACCCACAAGATTTAACACATACCATTTGAAGCACAAGGACAATAAAATGCTCGATCGAGATTTCGAGGGACAATCTCGATCAAATAACAAGCCTAGACTTATGAGGGTGAAATCGATGGCGAACCTCCGTAGCAAGACGTTATACCGACCCTTAGTCGAGATGTTGTTGAAGAGGCGATTGTTCAAGACTGTGGGCGCAATGGAGAATATTGGATACCAAAAGCCATAA 1779 41.54 MAHPIQYAETDPSRRYGRFKEILGKGAMKTVYKAFDEMLGLEVAWNQVQLKDVFHSHEELQHLYSEVHLLKNLDHDSVIRFHASWIDTQHRTFNFITEMFTSGTLREYRQKYRNVDIRVIKNWARQILRGLAYLHGHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLATILRDSQHAHSVIGTPEFMAPELYDEDYDELVDVYSFGMCLIEMLTLEFPYSECSNPAQIYKKVTSGKLPNALYKIKDMEAQRFVMKCLENVSKRLPAKELLLDPFLASNDNVHENNDEGHLCNLAVTSPARNRRTDMAISGSMCPKDHTVIQLKVQIQVKNGKANNVYFAFDTLNDTAIDVATEMVRELEIRDWDPMEIAMMIKKEISTLIPNWKEWNFPQSHHQDSVNYEDENENENDNDNDNNNNNDDDENDNVTPHPFYSCSSHASSSNSLQGLYSFYDYEYYYGSRNETSTAPQWFQEEFMIDEDASSSCSLNSFNYSDISFCSINEDEYECDSHLKGRDSTNQPTRFNTYHLKHKDNKMLDRDFEGQSRSNNKPRLMRVKSMANLRSKTLYRPLVEMLLKRRLFKTVGAMENIGYQKP 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5812680 5818403 + Sed0022253.1 Sed14g0580 736298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0580 592 Gene3D - 318 410 - -
Sed14g0580 592 Gene3D Transferase(Phosphotransferase) domain 1 100 283 - -
Sed14g0580 592 Gene3D Phosphorylase Kinase; domain 1 3 98 - -
Sed14g0580 592 MobiDBLite consensus disorder prediction 392 431 - -
Sed14g0580 592 SUPERFAMILY Protein kinase-like (PK-like) 19 453 IPR011009 -
Sed14g0580 592 CDD STKc_WNK 15 275 - -
Sed14g0580 592 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 535 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Sed14g0580 592 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0580 592 SMART serkin_6 17 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0580 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0580 592 ProSiteProfiles Protein kinase domain profile. 17 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0580 592 FunFam probable serine/threonine-protein kinase WNK9 100 280 - -
Sed14g0580 592 FunFam Probable serine/threonine-protein kinase WNK1 2 98 - -
Sed14g0580 592 MobiDBLite consensus disorder prediction 401 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g3346 Sed-Chr5:42770115 Sed14g0580 Sed-Chr14:5812680 1.50E-157 dispersed
Sed11g0252 Sed-Chr11:2244660 Sed14g0580 Sed-Chr14:5812680 3.70E-106 dispersed
Sed11g0253 Sed-Chr11:2244660 Sed14g0580 Sed-Chr14:5812680 5.00E-89 dispersed
Sed14g0580 Sed-Chr14:5812680 Sed04g1447 Sed-Chr4:29042025 1.50E-23 dispersed
Sed14g0580 Sed-Chr14:5812680 Sed14g0581 Sed-Chr14:5812680 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80157 PF00069 Pkinase 5.20E-49 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0580 K08867 - csv:101207665 798.89