Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0586 ATGGCGGATTTCGACGACAACAACCCCTCGCCGGAGCATGGCGGCGACGGGACTCTGTTCGGCAAATACGAACTCGGGAAGCTTCTGGGCTGTGGGGCTTTCGCAAAGGTCTACCATGGCAGAAACGTGATCACAGGACAGAGCGTTGCGATTAAGGCTGTAAACAAGCTGAAGGTCGTCAATGGCGGATTTACGGCGCACGTTAAGAGAGAAATCGCTATCATGCGCCGCCTCCGTCACCCCAACGTCGTCCGCCTCTTCGAAGTTCTGGCGACGAAGACGAAGATCTATTTCGTGATGGAATTCGCAAAGGGCGGTGAACTCTTCGCTAAGGTCTGCAAAGGAAGATTCAGCGAGAATCTCAGCCGTCGGTACTTTCACCAGCTGATCACCGCCGTCGGCCACTGCCATTCCAAAGGAATTTTCCACCGGGATTTGAAGCCGGAGAATCTTTTGCTGGATGACAATTTTGACCTCAGAGTTTCGGATTTCGGACTCAGTGCTTTAACGGATCAGATCCGACCCGACGGCCTGCTCCACACGCTGTGTGGGACGCCGGCTTACGTGGCGCCGGAGATTTTGGCCAAGAAAGGCTACGACGGCGCTAAGATCGATGTGTGGTCTTGTGGGATTATTCTTTACGTTTTGACCACTGGGTATCTTCCGTTTAATGATTCCAATTTGATGGCCATGTATCGGAAGATTTACAGGGGAGATTTCCGGTGTCCGAAATGGACCTCGCCGGAGCTCCGGCGGCTTCTCTCTCGCCTTCTGGACACGAATCCGGCCACGAGGATCACCGTCGATGAGATTTATCGAGATCCCTGGTTTCAAAACGGGGAGAAAATTCGAATCGAGGAATTCGCCGGAACAGAGGTTTGTAATTTCGGGGATTTAAGCAATTCGAAGTGTTTGAATGCTTTCGATCTGATTTCGTTTTCGCCTGGGTTTGATCTGACGGGGTTGTTGAACGAATCGGAGTTTTTCTCCGGCGTTGAGCGGTTTCTCTCCGCCGCGTCGCCGGCGAAGATTGTTCTCACGGTGGTGGAGGTTTCGAAGTCGGAAAATGCGGCGGTGGAGACGACCGGCTGGGGGGCGAAAGTGGAAGGTCGCGGCGGCGGGTTTGTCGCCGTGGTTGATATTTTCCGGCTGACGGCGGAGCTGGTGGTTGTTGAGATTAGAAACCGATTAAGTGAAATTGATGGAGATTGTCGGATTTGGAATGATAAATTGAGACCTCAACTTGATTGTTTGATCTACCGGCCGGAGTGA 1272 52.67 MADFDDNNPSPEHGGDGTLFGKYELGKLLGCGAFAKVYHGRNVITGQSVAIKAVNKLKVVNGGFTAHVKREIAIMRRLRHPNVVRLFEVLATKTKIYFVMEFAKGGELFAKVCKGRFSENLSRRYFHQLITAVGHCHSKGIFHRDLKPENLLLDDNFDLRVSDFGLSALTDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKIDVWSCGIILYVLTTGYLPFNDSNLMAMYRKIYRGDFRCPKWTSPELRRLLSRLLDTNPATRITVDEIYRDPWFQNGEKIRIEEFAGTEVCNFGDLSNSKCLNAFDLISFSPGFDLTGLLNESEFFSGVERFLSAASPAKIVLTVVEVSKSENAAVETTGWGAKVEGRGGGFVAVVDIFRLTAELVVVEIRNRLSEIDGDCRIWNDKLRPQLDCLIYRPE 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5909432 5911116 + Sed0009409.1 Sed14g0586 736304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0586 423 Gene3D Transferase(Phosphotransferase) domain 1 16 304 - -
Sed14g0586 423 SUPERFAMILY Protein kinase-like (PK-like) 20 287 IPR011009 -
Sed14g0586 423 SMART serkin_6 23 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0586 423 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 398 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Sed14g0586 423 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0586 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0586 423 Pfam NAF domain 303 359 IPR004041 GO:0007165(InterPro)
Sed14g0586 423 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165(InterPro)
Sed14g0586 423 CDD CIPK_C 306 416 - -
Sed14g0586 423 FunFam Aurora kinase A 17 106 - -
Sed14g0586 423 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524(InterPro)
Sed14g0586 423 FunFam Non-specific serine/threonine protein kinase 14 302 - -
Sed14g0586 423 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0586 423 Gene3D Kinase associated domain 1, KA1 305 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g3809 Sed-Chr5:45736155 Sed14g0586 Sed-Chr14:5909432 3.90E-138 dispersed
Sed14g0586 Sed-Chr14:5909432 Sed14g1514 Sed-Chr14:23449645 2.90E-122 dispersed
Sed14g0586 Sed-Chr14:5909432 Sed14g0587 Sed-Chr14:5939868 3.70E-109 tandem
Sed14g0586 Sed-Chr14:5909432 Sed03g2444 Sed-Chr3:22435935 1.70E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80159 PF00069 Pkinase 5.00E-69 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0586 - - - 0.0