Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0603 ATGGGAGCATGTTGTACAAAAGATCACATGTATGGAGGGTGCAATACCTATGATAAGGATGAGAGGGATTCGAATGGCGGGGACGATGGAGAAGAGGTTCGTCGCGGTGACGATGGCGCCACCGTTCGACTCCATGGATCCTCTGTGTTCACATCAATGTACACTCAACGAGGAAGAAAAGGAATCAATCAAGATGCAATGACGGTTTGGGAGGATTTCTCAGGGGAGAAAGATTTGACGTTCTGTGGAGTTTTTGATGGCCATGGTCCATCTGGTCATAGAGTTGCTTGCAATGCACGAGACCTGCTGCCATCAAAGCTCTCCAAGGCAATCAAGAAGCAGAAGCCATATCAACTCGAAAATGGAGTTTCTGAAGCTTCTGTTCAACCAGACAACAATGGTGGAAACCAACCAAATCCATTTGCTTCCAGATGGGAAGCAGCTTTTGAGGAATCTTGCAAGGATTTCGATCAAGAACTCGCCTTCGATTCATCTATCGATACTTTCTGTAGTGGAACGACAGCCGTGAACATTATCAAACAGGGAGATCATTTGTTGGTTGCAAACGTGGGTGACTCCCGGGCGGTTCTCTGCACCAGAGGAGACAAACATCAACATATTCCCATCCAATTAACAGTTGACCAGAAACCAAATGTTCCAGGTGAAGCAGAAAGAATAAAGAATTGCCAAGGCAGAATCATAGCAGAAAAAGAAGAACCAGACATATACAGAATATGGGTACCAGATGCAGAGTATCCTGGCCTGGCAATGTCAAGATCCTTGGGAGATTTTTGCCTCAAAGATTATGGAGTCATTCCAATCCCTCAATTCTACTACAGAAAACTCACAAGAAACGATCAGTTCATCATTCTAGCAACAGATGGGATATGGGACGTATTGACGAACAAGCAAGTAATCAACATAGTTGCTGCATCAAGGAACCGATCCACGGCGGCGAAATTGGTGGTGAAACTAGCCGTTCGTGAATGGAAAAGCCGATTTCCGGGATCGACAATCGACGATTGCACAGTGATATGCTTGTTCTTCAAGAACCCACCATTGCTGACCAGATCAATGACGAGCATTGGGCGGCGAAGCCTGAGAAACCACCTAGAGCTTGCAGTTTCAAGAAGCTGCAAATCCATGGCGATCGAAGAAGAGGAAGATCTGAAGGTTGTACATGGATTAAACAGAGCCAAATCACAGACTAGGGTTTCTCGATTTACAAGAACTCTGAACCATAATCAGAAATTGGGGAAGCTTTTTCATGGAGTTGAAGCTCGCTAA 1287 45.22 MGACCTKDHMYGGCNTYDKDERDSNGGDDGEEVRRGDDGATVRLHGSSVFTSMYTQRGRKGINQDAMTVWEDFSGEKDLTFCGVFDGHGPSGHRVACNARDLLPSKLSKAIKKQKPYQLENGVSEASVQPDNNGGNQPNPFASRWEAAFEESCKDFDQELAFDSSIDTFCSGTTAVNIIKQGDHLLVANVGDSRAVLCTRGDKHQHIPIQLTVDQKPNVPGEAERIKNCQGRIIAEKEEPDIYRIWVPDAEYPGLAMSRSLGDFCLKDYGVIPIPQFYYRKLTRNDQFIILATDGIWDVLTNKQVINIVAASRNRSTAAKLVVKLAVREWKSRFPGSTIDDCTVICLFFKNPPLLTRSMTSIGRRSLRNHLELAVSRSCKSMAIEEEEDLKVVHGLNRAKSQTRVSRFTRTLNHNQKLGKLFHGVEAR 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6105030 6108078 + Sed0026593.1 Sed14g0603 736321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0603 428 MobiDBLite consensus disorder prediction 120 139 - -
Sed14g0603 428 MobiDBLite consensus disorder prediction 114 139 - -
Sed14g0603 428 SMART PP2C_4 41 347 IPR001932 -
Sed14g0603 428 Pfam Protein phosphatase 2C 71 327 IPR001932 -
Sed14g0603 428 MobiDBLite consensus disorder prediction 16 38 - -
Sed14g0603 428 Gene3D - 40 351 IPR036457 -
Sed14g0603 428 PANTHER PROTEIN PHOSPHATASE 38 348 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Sed14g0603 428 SUPERFAMILY PP2C-like 44 352 IPR036457 -
Sed14g0603 428 CDD PP2Cc 52 349 IPR001932 -
Sed14g0603 428 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g1235 Sed-Chr11:28150901 Sed14g0603 Sed-Chr14:6105030 1.30E-86 dispersed
Sed13g1849 Sed-Chr13:23460053 Sed14g0603 Sed-Chr14:6105030 1.60E-62 dispersed
Sed14g0603 Sed-Chr14:6105030 Sed08g1784 Sed-Chr8:32608837 4.40E-25 dispersed
Sed14g0603 Sed-Chr14:6105030 Sed05g3131 Sed-Chr5:41400091 2.90E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0603 - - - 0.0