Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0643 ATGGCCGCCGCCACCGCCGCCGCGTCCTCGTTCATCGCCACCCGCCTCGCCGACGCACGGCGGGGGTCCGGCAAAGGCAAAGTAGAAGCCCGGTTCTCGTTCGGCAAGAAGAAAGCCGGTCCGGCGAAGAAAAAGGCGTCCTCGAAGAGGGTTCCGGACCGGCCGCTGTGGTACCCGGGAGCGAAGAAAAAGGCGTCCTCGAAGAGGGTTCCGGACCGGCCGCTGTGGTACCCGGGAGCGAAGGCGCCGGAGTGGCTGGACGGGAGCCTGGTCGGGGACTACGGGTTCGACCCGTTCGGGCTGGGTAAACCGGCGGAGTATTTGCAGTACGAATTGGACTCGCTGGACCAGAACTTGGCGAAGAACTCGGCGGGCGATCTAATCGGGACGAGATTTGAGAACTCGGAGGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTGTTTGGACTGCAGAGATTTCGTGAGTGTGAACTCATTCATGGACGGTGGGCCATGTTGGCCACTCTCGGCGCTCTCTCGGTTGAGTGGCTCACTGGCATCACTTGGCAAGACGCTGGAAAAGTAGAATTAGTGGAAGGTTCATCATACCTGGGTCAGCCGCTGCCATTCACCGTAACGACATTGATCTGGATCGAAGTGCTTGTGATTGGATACATCGAATTCCAAAGAAACGCGGAGTTGGAGCCAGAGAAGAGGTTGTACCCAGGCGGGAAGTTCTTCGACCCATTGGGCCTGGCGGAGGACCCGGAGAAGAAAGTCGTCCTACAGTTGGCTGAGATCAAGCACGCTCGCCTCGCCATGGTTGCCTTTCTCGGCTTTGCGGTCCAGGCCGCCGTCACCGGCAAAGGCCCGCTCAACAACTGGGCCACCCATTTGAGCGACCCGCTCCACACCACCATCATCGACTCCTTCTCTTCTTAG 924 59.74 MAAATAAASSFIATRLADARRGSGKGKVEARFSFGKKKAGPAKKKASSKRVPDRPLWYPGAKKKASSKRVPDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYELDSLDQNLAKNSAGDLIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFTVTTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6500049 6511884 - Sed0025923.1 Sed14g0643 736361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0643 307 MobiDBLite consensus disorder prediction 19 66 - -
Sed14g0643 307 Pfam Chlorophyll A-B binding protein 82 278 IPR022796 -
Sed14g0643 307 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 25 302 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Sed14g0643 307 Gene3D Chlorophyll a/b binding protein domain 76 307 - -
Sed14g0643 307 FunFam Chlorophyll a-b binding protein, chloroplastic 128 307 - -
Sed14g0643 307 MobiDBLite consensus disorder prediction 20 36 - -
Sed14g0643 307 SUPERFAMILY Chlorophyll a-b binding protein 68 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0643 Sed-Chr14:6500049 Sed01g0736 Sed-Chr1:5420644 1.60E-24 dispersed
Sed14g0643 Sed-Chr14:6500049 Sed14g0644 Sed-Chr14:6510235 2.60E-160 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0643 K08915 - csv:101208740 496.893