Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0660 ATGATTGTTTCCATGGACTTGAATGCCTCGCCGGTGCCTGAAGAGGATGAAGAGACGTTTGAGAAGCATGAAGAGGTGTATGTGTATAGTGCTCCCGAGGAACATATTGAGTCTGGTGCTAGTATTGCACGGCGGGAGCGAGAAGAAAGAAAAAGGCGGTTGAAAAGAGATCGCTCTCTTGAGAGACCGGTGCATGAGTACCAACAACCTGTGCGGGATCAGTTTTACCCTCCTAAAAACCAAAAATCTGATAGGAACAGGCTTCCCCCAGGTTGGTTGGATTGTCCTGCATTTGGTAGTGAAATATGTTTCATGATTCCTTCCAAGGTTCCTCTGGGTGAATCCTTCAATGATTGTATAACACCTGGTAAAAGATACTCATTTAAGCAAGTGATCCATCAGCAGAGAGTATGTGGAAGGAAACTCGGTTTGGTGATTGATTTGACAAATTCTTATCGTTATTATACAACAACAGAATTGAATAAGGAGGGTATCAAGTATGTCAAGATTCCTTGCAAGGGGAGGGATTCTGTACCTGACAACAAGTCAGTCAATATGTTTGTTTACGAGGTCATTCAGTTCCTTTCTCGTCAGAAACACTCGAAGAAGTATATTCTTGTCCATTGCACACATGGCCATAATCGAACTGGATATATGGTTATAAGTTACCTCGTGCGTGCGCTATCCATTTCTGTTACACAGGCTCTCAAAACGTTTTCTGATGCACGTCCTCCTGGAATTTACAAGCCAGACTACATTGATGCACTATATGCCTTTTACCATGAAAGAAAACCTGAAGTAGTTGTTTGCCCACCCACGCCTGAATGGAAGAGATCTTCAGATCTTGATCTGAATGGTGAAGCAGTTCCGGATGATGATGATGATGGTCCTGCTGCTCCTTTGAATGAAAATCATGATGATGGTGCTCAAGTGATGACAAATGATGATATATTGGGAGATGAGATACCTGAGGACCAGGAACGTGCTTTGAAACACTTTTGCTATCAAATGCTTAAATTGAATGCTGGAGCAAGAGCAAATTTGCAATTTCCAGGGTCACATCCAGTGTCTCTTAACAGAGAGAATCTGCAACTGCTAAGGCAACGCTATTATTATGCCACATGGAAAGCTGATGGAACACGATATATGATGCTAATAACCGTGGATGGATGCTACTTGATTGACAGGGGTTTTAGATTTCGAAGGGTCCAAATGAGATTTCCTTGCAGAAACCCGAGTGATGGACTAGTTGAGAAGATTCACCACTATACACTTCTTGATGGAGAAATGGTCATTGATACTGTCCCAGACTCGCAGAAGCAGGAGAGAAGATATCTTATCTATGACATGATGGCAATTAATCACGTTTCAATTACAGAGCGTCCTTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGCAACTATGAGCGCCATAATATATACCAAAGCAGGAACCCTCATTATAGATATGACCTAGAACCATTCAGGGTGAGGAGGAAAGACTTTTGGTTACTCTCTACAGTTACCAAACTTTTGAAGGAGTTCATACCAAGGCTTTCACACGATGCTGATGGTCTAATATTTCAGGGATGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTAAAGTGGAAATATCCTGAAATGAACTCGGTCGACTTCCTATTCGAGGTTTGTGGTGATGATGGTTCTCAGATTCTTATTTTGTTCGAACGAGGAAAGAAGAAAACAATGGACGGAAATAGGGTTAAGTTCAAAGATGGCGATCCCTCCTTTTATTCAGGAAAGATTGTTGAGTGTTCTTGGGATTCTGATGAGCATGTTTGGGTCTGCATGCGTGTCAGGACCGATAAAACGACTCCTAATGATATCAATACTTATAGAAAGGTCATGCGCAGTATTAAAGACAATATCACGGAGGAGGATTTGTTGAAGGAGATTCATGAAATCATTCGCTTGCCCATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCTCAACATACGAATTCAACACGACGGAGATGA 2052 41.91 MIVSMDLNASPVPEEDEETFEKHEEVYVYSAPEEHIESGASIARREREERKRRLKRDRSLERPVHEYQQPVRDQFYPPKNQKSDRNRLPPGWLDCPAFGSEICFMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVCGRKLGLVIDLTNSYRYYTTTELNKEGIKYVKIPCKGRDSVPDNKSVNMFVYEVIQFLSRQKHSKKYILVHCTHGHNRTGYMVISYLVRALSISVTQALKTFSDARPPGIYKPDYIDALYAFYHERKPEVVVCPPTPEWKRSSDLDLNGEAVPDDDDDGPAAPLNENHDDGAQVMTNDDILGDEIPEDQERALKHFCYQMLKLNAGARANLQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITVDGCYLIDRGFRFRRVQMRFPCRNPSDGLVEKIHHYTLLDGEMVIDTVPDSQKQERRYLIYDMMAINHVSITERPFYERWKMLEKEVIEPRNYERHNIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEVCGDDGSQILILFERGKKKTMDGNRVKFKDGDPSFYSGKIVECSWDSDEHVWVCMRVRTDKTTPNDINTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6636570 6651652 - Sed0013899.2 Sed14g0660 736378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0660 683 Gene3D Protein tyrosine phosphatase superfamily 84 296 IPR029021 -
Sed14g0660 683 Pfam mRNA capping enzyme, catalytic domain 354 552 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Sed14g0660 683 Pfam Dual specificity phosphatase, catalytic domain 140 260 IPR000340 GO:0016311(InterPro)
Sed14g0660 683 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 277 IPR029021 -
Sed14g0660 683 SUPERFAMILY Nucleic acid-binding proteins 555 668 IPR012340 -
Sed14g0660 683 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 266 IPR020422 GO:0006470(InterPro)
Sed14g0660 683 MobiDBLite consensus disorder prediction 279 309 - -
Sed14g0660 683 Gene3D - 584 660 IPR012340 -
Sed14g0660 683 MobiDBLite consensus disorder prediction 38 68 - -
Sed14g0660 683 ProSiteProfiles ATP-dependent DNA ligase family profile. 436 582 IPR012310 GO:0003910(InterPro)|GO:0005524(InterPro)|GO:0006281(InterPro)|GO:0006310(InterPro)
Sed14g0660 683 MobiDBLite consensus disorder prediction 38 88 - -
Sed14g0660 683 FunFam mRNA capping enzyme family protein 551 660 - -
Sed14g0660 683 PANTHER MRNA-CAPPING ENZYME 80 657 IPR051029 GO:0004484(PANTHER)|GO:0006370(PANTHER)
Sed14g0660 683 Pfam mRNA capping enzyme, C-terminal domain 590 651 IPR013846 -
Sed14g0660 683 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311(InterPro)
Sed14g0660 683 Gene3D DNA ligase/mRNA capping enzyme 307 552 - -
Sed14g0660 683 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 314 553 - -
Sed14g0660 683 FunFam mRNA capping enzyme family protein 84 298 - -
Sed14g0660 683 FunFam mRNA capping enzyme, putative 313 550 - -
Sed14g0660 683 CDD RNA_5'-triphosphatase 91 257 - -
Sed14g0660 683 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 254 IPR000387 GO:0016311(InterPro)
Sed14g0660 683 CDD Adenylation_mRNA_capping 347 553 IPR001339 GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro)
Sed14g0660 683 MobiDBLite consensus disorder prediction 1 22 - -
Sed14g0660 683 PIRSF mRNA_capping_HCE 76 683 IPR017074 GO:0004484(InterPro)|GO:0006370(InterPro)|GO:0140818(InterPro)
Sed14g0660 683 SMART dsp_5 127 262 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0659 Sed-Chr14:6636570 Sed14g0660 Sed-Chr14:6636570 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0660 K13917 - csv:101209960 1246.11