Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0660 | ATGATTGTTTCCATGGACTTGAATGCCTCGCCGGTGCCTGAAGAGGATGAAGAGACGTTTGAGAAGCATGAAGAGGTGTATGTGTATAGTGCTCCCGAGGAACATATTGAGTCTGGTGCTAGTATTGCACGGCGGGAGCGAGAAGAAAGAAAAAGGCGGTTGAAAAGAGATCGCTCTCTTGAGAGACCGGTGCATGAGTACCAACAACCTGTGCGGGATCAGTTTTACCCTCCTAAAAACCAAAAATCTGATAGGAACAGGCTTCCCCCAGGTTGGTTGGATTGTCCTGCATTTGGTAGTGAAATATGTTTCATGATTCCTTCCAAGGTTCCTCTGGGTGAATCCTTCAATGATTGTATAACACCTGGTAAAAGATACTCATTTAAGCAAGTGATCCATCAGCAGAGAGTATGTGGAAGGAAACTCGGTTTGGTGATTGATTTGACAAATTCTTATCGTTATTATACAACAACAGAATTGAATAAGGAGGGTATCAAGTATGTCAAGATTCCTTGCAAGGGGAGGGATTCTGTACCTGACAACAAGTCAGTCAATATGTTTGTTTACGAGGTCATTCAGTTCCTTTCTCGTCAGAAACACTCGAAGAAGTATATTCTTGTCCATTGCACACATGGCCATAATCGAACTGGATATATGGTTATAAGTTACCTCGTGCGTGCGCTATCCATTTCTGTTACACAGGCTCTCAAAACGTTTTCTGATGCACGTCCTCCTGGAATTTACAAGCCAGACTACATTGATGCACTATATGCCTTTTACCATGAAAGAAAACCTGAAGTAGTTGTTTGCCCACCCACGCCTGAATGGAAGAGATCTTCAGATCTTGATCTGAATGGTGAAGCAGTTCCGGATGATGATGATGATGGTCCTGCTGCTCCTTTGAATGAAAATCATGATGATGGTGCTCAAGTGATGACAAATGATGATATATTGGGAGATGAGATACCTGAGGACCAGGAACGTGCTTTGAAACACTTTTGCTATCAAATGCTTAAATTGAATGCTGGAGCAAGAGCAAATTTGCAATTTCCAGGGTCACATCCAGTGTCTCTTAACAGAGAGAATCTGCAACTGCTAAGGCAACGCTATTATTATGCCACATGGAAAGCTGATGGAACACGATATATGATGCTAATAACCGTGGATGGATGCTACTTGATTGACAGGGGTTTTAGATTTCGAAGGGTCCAAATGAGATTTCCTTGCAGAAACCCGAGTGATGGACTAGTTGAGAAGATTCACCACTATACACTTCTTGATGGAGAAATGGTCATTGATACTGTCCCAGACTCGCAGAAGCAGGAGAGAAGATATCTTATCTATGACATGATGGCAATTAATCACGTTTCAATTACAGAGCGTCCTTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGCAACTATGAGCGCCATAATATATACCAAAGCAGGAACCCTCATTATAGATATGACCTAGAACCATTCAGGGTGAGGAGGAAAGACTTTTGGTTACTCTCTACAGTTACCAAACTTTTGAAGGAGTTCATACCAAGGCTTTCACACGATGCTGATGGTCTAATATTTCAGGGATGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTAAAGTGGAAATATCCTGAAATGAACTCGGTCGACTTCCTATTCGAGGTTTGTGGTGATGATGGTTCTCAGATTCTTATTTTGTTCGAACGAGGAAAGAAGAAAACAATGGACGGAAATAGGGTTAAGTTCAAAGATGGCGATCCCTCCTTTTATTCAGGAAAGATTGTTGAGTGTTCTTGGGATTCTGATGAGCATGTTTGGGTCTGCATGCGTGTCAGGACCGATAAAACGACTCCTAATGATATCAATACTTATAGAAAGGTCATGCGCAGTATTAAAGACAATATCACGGAGGAGGATTTGTTGAAGGAGATTCATGAAATCATTCGCTTGCCCATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCTCAACATACGAATTCAACACGACGGAGATGA | 2052 | 41.91 | MIVSMDLNASPVPEEDEETFEKHEEVYVYSAPEEHIESGASIARREREERKRRLKRDRSLERPVHEYQQPVRDQFYPPKNQKSDRNRLPPGWLDCPAFGSEICFMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVCGRKLGLVIDLTNSYRYYTTTELNKEGIKYVKIPCKGRDSVPDNKSVNMFVYEVIQFLSRQKHSKKYILVHCTHGHNRTGYMVISYLVRALSISVTQALKTFSDARPPGIYKPDYIDALYAFYHERKPEVVVCPPTPEWKRSSDLDLNGEAVPDDDDDGPAAPLNENHDDGAQVMTNDDILGDEIPEDQERALKHFCYQMLKLNAGARANLQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITVDGCYLIDRGFRFRRVQMRFPCRNPSDGLVEKIHHYTLLDGEMVIDTVPDSQKQERRYLIYDMMAINHVSITERPFYERWKMLEKEVIEPRNYERHNIYQSRNPHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEVCGDDGSQILILFERGKKKTMDGNRVKFKDGDPSFYSGKIVECSWDSDEHVWVCMRVRTDKTTPNDINTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR | 683 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 6636570 | 6651652 | - | Sed0013899.2 | Sed14g0660 | 736378 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0660 | 683 | Gene3D | Protein tyrosine phosphatase superfamily | 84 | 296 | IPR029021 | - | |
Sed14g0660 | 683 | Pfam | mRNA capping enzyme, catalytic domain | 354 | 552 | IPR001339 | GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro) | |
Sed14g0660 | 683 | Pfam | Dual specificity phosphatase, catalytic domain | 140 | 260 | IPR000340 | GO:0016311(InterPro) | |
Sed14g0660 | 683 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 88 | 277 | IPR029021 | - | |
Sed14g0660 | 683 | SUPERFAMILY | Nucleic acid-binding proteins | 555 | 668 | IPR012340 | - | |
Sed14g0660 | 683 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 115 | 266 | IPR020422 | GO:0006470(InterPro) | |
Sed14g0660 | 683 | MobiDBLite | consensus disorder prediction | 279 | 309 | - | - | |
Sed14g0660 | 683 | Gene3D | - | 584 | 660 | IPR012340 | - | |
Sed14g0660 | 683 | MobiDBLite | consensus disorder prediction | 38 | 68 | - | - | |
Sed14g0660 | 683 | ProSiteProfiles | ATP-dependent DNA ligase family profile. | 436 | 582 | IPR012310 | GO:0003910(InterPro)|GO:0005524(InterPro)|GO:0006281(InterPro)|GO:0006310(InterPro) | |
Sed14g0660 | 683 | MobiDBLite | consensus disorder prediction | 38 | 88 | - | - | |
Sed14g0660 | 683 | FunFam | mRNA capping enzyme family protein | 551 | 660 | - | - | |
Sed14g0660 | 683 | PANTHER | MRNA-CAPPING ENZYME | 80 | 657 | IPR051029 | GO:0004484(PANTHER)|GO:0006370(PANTHER) | |
Sed14g0660 | 683 | Pfam | mRNA capping enzyme, C-terminal domain | 590 | 651 | IPR013846 | - | |
Sed14g0660 | 683 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 207 | 217 | IPR016130 | GO:0016311(InterPro) | |
Sed14g0660 | 683 | Gene3D | DNA ligase/mRNA capping enzyme | 307 | 552 | - | - | |
Sed14g0660 | 683 | SUPERFAMILY | DNA ligase/mRNA capping enzyme, catalytic domain | 314 | 553 | - | - | |
Sed14g0660 | 683 | FunFam | mRNA capping enzyme family protein | 84 | 298 | - | - | |
Sed14g0660 | 683 | FunFam | mRNA capping enzyme, putative | 313 | 550 | - | - | |
Sed14g0660 | 683 | CDD | RNA_5'-triphosphatase | 91 | 257 | - | - | |
Sed14g0660 | 683 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 185 | 254 | IPR000387 | GO:0016311(InterPro) | |
Sed14g0660 | 683 | CDD | Adenylation_mRNA_capping | 347 | 553 | IPR001339 | GO:0004484(InterPro)|GO:0005524(InterPro)|GO:0006370(InterPro) | |
Sed14g0660 | 683 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Sed14g0660 | 683 | PIRSF | mRNA_capping_HCE | 76 | 683 | IPR017074 | GO:0004484(InterPro)|GO:0006370(InterPro)|GO:0140818(InterPro) | |
Sed14g0660 | 683 | SMART | dsp_5 | 127 | 262 | IPR020422 | GO:0006470(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed14g0659 | Sed-Chr14:6636570 | Sed14g0660 | Sed-Chr14:6636570 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0660 | K13917 | - | csv:101209960 | 1246.11 |