Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0672 ATGTCTTTTGAACACCATAAGCTGGTAAAAAAAAAACCAAGGCCTCTGTTTTCAAAATTTTGTGGAGATCAGAAAGAAAAAATGGGTGAAGAAGTGCAAGTATTGGGAGCTTGGATGAGTCCATTTAGCCACAGAGTTGAGTTAGCTTTGAAACTCAAATCCATTGAGTATCAATATATTGAACAAGACTTGAAAAACAAGAGCCATTTGCTTCTCAATTACAACCCAATTCACAAGAAGGTACCTGTTCTTGTCCACAATGGCAATACCATTTGTGAGTCTCTTGTTGTTCTTCAATATATTGATGAGAATTGGAAGAACAGCCCCATTTTGCCTCAAGATCTTCACCAAAAAGCTCAAGCAATGTTTTGGGCTAAGTATATTGATGACAAGGTACTGCCTGCGGTCCTACGAGCAGCACGAAGCAAAAGAGAAGAGCGAGCAAAAGCCGTAGAAGAAGCAAGGGAGACATTGGAAGCACTTGAAAATGAACTTAAGAACAAGAAGTTTTTTGGAGGAGATGAAATTGGATTTGTGGACATTGTTGGAACTATAGTTGCCTACTGGTTTCCTGCCATTGAAGAAGGCTTTGAGTTTGAGCTATTTAAAAGCAACAAATTTCCAAACTTAAGCCAATGGAGTGAAGTGCTTGTGAACCACTCCTTGGTTAAGGAGATTTTGCCTTCAAAACCCAAACTCATTGCCTATTTGCAAGTTGTTCTTTGA 726 38.98 MSFEHHKLVKKKPRPLFSKFCGDQKEKMGEEVQVLGAWMSPFSHRVELALKLKSIEYQYIEQDLKNKSHLLLNYNPIHKKVPVLVHNGNTICESLVVLQYIDENWKNSPILPQDLHQKAQAMFWAKYIDDKVLPAVLRAARSKREERAKAVEEARETLEALENELKNKKFFGGDEIGFVDIVGTIVAYWFPAIEEGFEFELFKSNKFPNLSQWSEVLVNHSLVKEILPSKPKLIAYLQVVL 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6755120 6756974 + Sed0020207.1 Sed14g0672 736390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0672 241 Pfam Glutathione S-transferase, C-terminal domain 123 217 IPR004046 -
Sed14g0672 241 SFLD Glutathione Transferase (cytosolic) 28 238 IPR040079 -
Sed14g0672 241 Coils Coil 137 171 - -
Sed14g0672 241 CDD GST_N_Tau 32 105 - -
Sed14g0672 241 Gene3D - 111 241 - -
Sed14g0672 241 Gene3D Glutaredoxin 26 110 - -
Sed14g0672 241 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 31 238 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Sed14g0672 241 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 30 109 IPR004045 -
Sed14g0672 241 SUPERFAMILY Thioredoxin-like 32 132 IPR036249 -
Sed14g0672 241 CDD GST_C_Tau 116 239 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Sed14g0672 241 FunFam Tau class glutathione S-transferase 111 241 - -
Sed14g0672 241 FunFam Tau class glutathione S-transferase 27 114 - -
Sed14g0672 241 SUPERFAMILY GST C-terminal domain-like 103 239 IPR036282 -
Sed14g0672 241 Pfam Glutathione S-transferase, N-terminal domain 31 103 IPR004045 -
Sed14g0672 241 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 114 237 IPR010987 -
Sed14g0672 241 SFLD Main.3: Omega- and Tau-like 28 238 IPR045073 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g2328 Sed-Chr3:18575298 Sed14g0672 Sed-Chr14:6755120 2.40E-75 dispersed
Sed03g2333 Sed-Chr3:18685475 Sed14g0672 Sed-Chr14:6755120 2.00E-69 dispersed
Sed03g2493 Sed-Chr3:28018490 Sed14g0672 Sed-Chr14:6755120 1.00E-59 dispersed
Sed06g0723 Sed-Chr6:7071607 Sed14g0672 Sed-Chr14:6755120 3.30E-64 dispersed
Sed12g0281 Sed-Chr12:1606834 Sed14g0672 Sed-Chr14:6755120 4.60E-50 dispersed
Sed13g0672 Sed-Chr13:4630270 Sed14g0672 Sed-Chr14:6755120 1.80E-39 dispersed
Sed13g0673 Sed-Chr13:4642427 Sed14g0672 Sed-Chr14:6755120 1.20E-37 dispersed
Sed14g0672 Sed-Chr14:6755120 Sed02g1454 Sed-Chr2:50600853 2.10E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0672 K00799 - csv:101219743 276.559