Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0722 | ATGGCGACCAATTTCTGGTCCTTGGCGTGTATTCGGAGCCAGAGCCGCACCACTCTGCTGCCCCGCCCTCGTTATCCCTCCATGCTCAAATACCCCGTTGGGGTTTCGCCGCCGGAGAATAGCCCCCCCACCGCCGACTCCACGGCCTTCTTCTCCGTCACCGGAATGAGCTGTTCCGCCTGTGCCGGCTCCGTCGAGAAGGCCATCAAACGCCTCCCTGGCATTCGTCAAGCCGTCGTCGATGTTTTGAATGCCAAAGCTCGCGTCCAGTTTTACCCTACCTTCGTTCATGTGGATCAAATATGTGAAGCAATTAACGATGCAGGCTTTGAAGCAAGTATAGTCGACGATGATATGATTGAAAGATGTCGAATTCGTGTAATTGGGATGACTTGCACTTCTTGTTCCTCAACTGTGGAATCTACATTACAAGCAATTCGTGGAGTTCAAAATGCCCAAGTTGCATTAGCCACGGAAGAGGCAGAAGTTTGTTACGATCCAAGAATTTTGAACTACAATCAACTTCTCCAGGCCATTGAAGATTCTGGATTTGAAGCTTTACTTATTAGCACAGAAGAAGATGTGAGCAAGATACAGCTCCAAGTTGATGGAATGAGATCTGAGGATTCAATGAAATTGATTGGGAGCACTTTGGAAGCACTTCCTGGAGTTCTAGGAATCGATATTGACCCTGTACTCGGAAAACTTTCTTTGTCTTATAAGCCAAATGTCACCGGACCTCGGAATATAATCCAAGTAATTGAATCAACTGGATCTGGTCAATTTAAAGCAACAATATTTCCTGAAGAACATGACAGAGAAGCTTATAAAAAGGAGGAAATTAAGCAATATTACAGATCATTCTTATGGAGTCTGATATTTACAATTCCAGTATTTTTAAGCTCTATGGTCTTCACTTATGTGCCTGGTATTAAGAATGGGCTAGATGCCAAAATTGTCAATATGATGACTGTTGGGGAGCTGTTGAGGTGGGTTTTATCAACTCCTGTACAGTTCATTATTGGAAGGCGATTCTATACTGGTTCTTACAAAGCATTGCGCCATGGTTCTGCAAATATGGACGTATTGATTGCTCTGGGGACTAATGCAGCATATTTTTATTCAGTCTACATGGTCTTAAGATCTGCAACCTCAAGTGAATTTATGGCCACAGACTTTTTTGAGACCAGTTCCATGCTTATTTCATTCATTCTTCTTGGGAAATATCTAGAGGTCTTAGCTAAGGGAAAGACATCAGAGGCTATCGCCAAGCTTATGAAGTTGGTGCCTGAAACAGCGACCTTGCTTACTCTTGATAATGATGGAAATATCATTAGGGAAGAAGAAATTGATAGTAGATTGATACAAAAGAATGATGTGATTAAAGTCATTCCAGGGGCTAAGGTTGCTTCCGATGGAGTTGTAGTTTGGGGACAAAGTCATGTCAACGAAAGCATGATTACTGGGGAAGCCAAGGCGGTGGCAAAAAGAAGGGATGATACGGTGATTGGAGGCACTTTGAACGAGAATGGTGTTCTACATGTTAGAGCAACACACGTTGGCTCTGAAAGTGCTCTTTCACAGATTGTTCGACTTGTTGAATCAGCTCAGATGGCCAAGGCTCCAGTTCAGAAAATTGCGGATCGCATCTCTAAGTTTTTTGTGCCAATGGTTATAGTCTTTTCATTGACGACATGGCTCGTTTGGTTTCTTACTGGAAAATATGGCGGCTACCCAAAGTCCTGGATACCTTCTTCCATGGATAGCTTTGAACTGGCTCTCCAATTTGGCATTTCAGTTATGGTCATAGCCTGCCCGTGTGCTTTGGGCCTGGCAACTCCAACTGCTGTCATGGTTGGAACAGGAGTCGGTGCGTCAAAAGGTGTTTTAATTAAAGGAGGGCAAGCATTAGAGAGTGCTCACAAGGTGAATTGCATTGTGTTTGACAAAACTGGAACTCTTACGATTGGGAAGCCGGTTGTGGTGAACACAAAGCTACTAAAAAATGTGGTAAAAAAGATGGCTCTCGAAGAATTCTATGAACTAGTCGCTGCAACTGAGGTCAACAGCGAGCATCCATTGGCCAAAGCTGTTGTTGAATATGCTAAAAAGTTCAAAGAGCAGGATGATAGCCAAACTTGGCCTGAAGCACTGGAATTTATATCCATTACTGGACATGGTGTTAAGGCCATAGTTCAAAACAAAGAAGTAATTGCAGGCAACCAGAGTCTTATGTTAGATGAGCACATTTTCATACCCGTTGAAGCTGAAGAGATGCTAAAAGAAATCGAAGAAATGGCTCAAACTGGAATTTTGGTATCCATTGATAGGAAATTGACCGGGGTTATTGCCATATCTGATCCACTAAAACCAAGTGCTCGTGAGGTTATTTCCATGCTCAAGGCCATGAAAGTTAAATCCATTATGGTGACAGGTGACAATTGGGGGACAGCGAACTCCATAGCCAATCAGGTTGGGATTGATGACGTAATTGCAGAAGCTAAACCCGACCAGAAAGCAGAGGAAGTGAAGCGATTACAGTCTTTGGGTCATACGGTGGCAATGGTGGGCGACGGGATCAATGACTCCCCTGCACTTGTAGCTGCAGATGTAGGAATGGCAATTGGTGCAGGCACAGACATTGCCATTGAGGCAGCTGACATAGTTCTCATGAAAAGTCACTTGGAGGATGTCATAACAGCCATCGACCTTTCGAGGAAAACGTTTTCCAGGATCCGTTTGAACTACGGTTGGGCACTCGGTTACAATCTCCTCGGCATCCCTATTGCAGCAGGAGTACTATTCCCGTCAACTCGGTTTAGGTTACCGCCATGGATTGCAGGAGCAGCAATGGCAGCCTCCTCTGTTAGTGTTGTTTGCAGTTCTCTGTTGCTGAAGTACTACAAAAGACCCAAGAAGCTTGATACTCTTGAGATACAAGGCATTAGAGTTGAGTGA | 2958 | 44.19 | MATNFWSLACIRSQSRTTLLPRPRYPSMLKYPVGVSPPENSPPTADSTAFFSVTGMSCSACAGSVEKAIKRLPGIRQAVVDVLNAKARVQFYPTFVHVDQICEAINDAGFEASIVDDDMIERCRIRVIGMTCTSCSSTVESTLQAIRGVQNAQVALATEEAEVCYDPRILNYNQLLQAIEDSGFEALLISTEEDVSKIQLQVDGMRSEDSMKLIGSTLEALPGVLGIDIDPVLGKLSLSYKPNVTGPRNIIQVIESTGSGQFKATIFPEEHDREAYKKEEIKQYYRSFLWSLIFTIPVFLSSMVFTYVPGIKNGLDAKIVNMMTVGELLRWVLSTPVQFIIGRRFYTGSYKALRHGSANMDVLIALGTNAAYFYSVYMVLRSATSSEFMATDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMKLVPETATLLTLDNDGNIIREEEIDSRLIQKNDVIKVIPGAKVASDGVVVWGQSHVNESMITGEAKAVAKRRDDTVIGGTLNENGVLHVRATHVGSESALSQIVRLVESAQMAKAPVQKIADRISKFFVPMVIVFSLTTWLVWFLTGKYGGYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASKGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVNTKLLKNVVKKMALEEFYELVAATEVNSEHPLAKAVVEYAKKFKEQDDSQTWPEALEFISITGHGVKAIVQNKEVIAGNQSLMLDEHIFIPVEAEEMLKEIEEMAQTGILVSIDRKLTGVIAISDPLKPSAREVISMLKAMKVKSIMVTGDNWGTANSIANQVGIDDVIAEAKPDQKAEEVKRLQSLGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSHLEDVITAIDLSRKTFSRIRLNYGWALGYNLLGIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLLLKYYKRPKKLDTLEIQGIRVE | 985 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 7434904 | 7441061 | + | Sed0002476.1 | Sed14g0722 | 736440 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0722 | 985 | FunFam | ATPase copper transporting beta | 119 | 193 | - | - | |
Sed14g0722 | 985 | ProSiteProfiles | Heavy-metal-associated domain profile. | 196 | 262 | IPR006121 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | SUPERFAMILY | HMA, heavy metal-associated domain | 122 | 192 | IPR036163 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | Pfam | haloacid dehalogenase-like hydrolase | 644 | 870 | - | - | |
Sed14g0722 | 985 | FunFam | Probable copper-transporting ATPase HMA5 | 755 | 913 | - | - | |
Sed14g0722 | 985 | FunFam | Copper-transporting ATPase HMA5 | 46 | 117 | - | - | |
Sed14g0722 | 985 | PRINTS | Copper-transporting ATPase 1 signature | 74 | 97 | - | - | |
Sed14g0722 | 985 | PRINTS | Copper-transporting ATPase 1 signature | 48 | 73 | - | - | |
Sed14g0722 | 985 | PRINTS | Copper-transporting ATPase 1 signature | 103 | 123 | - | - | |
Sed14g0722 | 985 | PRINTS | Copper-transporting ATPase 1 signature | 145 | 166 | - | - | |
Sed14g0722 | 985 | Gene3D | - | 614 | 913 | IPR023214 | - | |
Sed14g0722 | 985 | Gene3D | - | 120 | 193 | - | - | |
Sed14g0722 | 985 | SUPERFAMILY | HAD-like | 646 | 962 | IPR036412 | - | |
Sed14g0722 | 985 | SUPERFAMILY | HMA, heavy metal-associated domain | 47 | 117 | IPR036163 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | NCBIfam | HAD-IC family P-type ATPase | 400 | 938 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Sed14g0722 | 985 | ProSiteProfiles | Heavy-metal-associated domain profile. | 121 | 187 | IPR006121 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | CDD | HMA | 51 | 113 | IPR006121 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 649 | 655 | IPR018303 | - | |
Sed14g0722 | 985 | ProSitePatterns | Heavy-metal-associated domain. | 53 | 82 | IPR017969 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 672 | 791 | IPR023299 | GO:0000166(InterPro) | |
Sed14g0722 | 985 | SUPERFAMILY | HMA, heavy metal-associated domain | 193 | 259 | IPR036163 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | Gene3D | - | 736 | 787 | IPR023299 | GO:0000166(InterPro) | |
Sed14g0722 | 985 | Gene3D | - | 654 | 735 | IPR023299 | GO:0000166(InterPro) | |
Sed14g0722 | 985 | PRINTS | P-type cation-transporting ATPase superfamily signature | 803 | 813 | - | - | |
Sed14g0722 | 985 | PRINTS | P-type cation-transporting ATPase superfamily signature | 879 | 891 | - | - | |
Sed14g0722 | 985 | PRINTS | P-type cation-transporting ATPase superfamily signature | 647 | 661 | - | - | |
Sed14g0722 | 985 | PRINTS | P-type cation-transporting ATPase superfamily signature | 781 | 792 | - | - | |
Sed14g0722 | 985 | PRINTS | P-type cation-transporting ATPase superfamily signature | 483 | 497 | - | - | |
Sed14g0722 | 985 | PRINTS | P-type cation-transporting ATPase superfamily signature | 856 | 875 | - | - | |
Sed14g0722 | 985 | NCBIfam | copper ion binding protein | 51 | 112 | IPR006122 | GO:0005507(InterPro) | |
Sed14g0722 | 985 | NCBIfam | copper ion binding protein | 124 | 186 | IPR006122 | GO:0005507(InterPro) | |
Sed14g0722 | 985 | SFLD | p-type atpase | 629 | 908 | IPR044492 | - | |
Sed14g0722 | 985 | ProSitePatterns | Heavy-metal-associated domain. | 127 | 156 | IPR017969 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | CDD | P-type_ATPase_Cu-like | 286 | 952 | - | - | |
Sed14g0722 | 985 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 1 | 984 | - | - | |
Sed14g0722 | 985 | Gene3D | - | 44 | 115 | - | - | |
Sed14g0722 | 985 | FunFam | Copper-transporting ATPase 1, putative | 415 | 537 | - | - | |
Sed14g0722 | 985 | Gene3D | - | 415 | 537 | - | - | |
Sed14g0722 | 985 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 395 | 913 | IPR023298 | - | |
Sed14g0722 | 985 | Pfam | Heavy-metal-associated domain | 51 | 111 | IPR006121 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | Pfam | Heavy-metal-associated domain | 125 | 185 | IPR006121 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | ProSiteProfiles | Heavy-metal-associated domain profile. | 47 | 113 | IPR006121 | GO:0046872(InterPro) | |
Sed14g0722 | 985 | Gene3D | - | 195 | 268 | - | - | |
Sed14g0722 | 985 | Pfam | E1-E2 ATPase | 428 | 625 | - | - | |
Sed14g0722 | 985 | SFLD | Haloacid Dehalogenase | 629 | 908 | - | - | |
Sed14g0722 | 985 | NCBIfam | heavy metal translocating P-type ATPase | 360 | 965 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Sed14g0722 | 985 | SUPERFAMILY | Calcium ATPase, transduction domain A | 447 | 533 | IPR008250 | - | |
Sed14g0722 | 985 | CDD | HMA | 125 | 186 | IPR006121 | GO:0046872(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g3888 | Sed-Chr1:68123553 | Sed14g0722 | Sed-Chr14:7434904 | 0.00E+00 | dispersed | |
Sed01g3889 | Sed-Chr1:68123553 | Sed14g0722 | Sed-Chr14:7434904 | 6.00E-305 | dispersed | |
Sed05g3458 | Sed-Chr5:43433441 | Sed14g0722 | Sed-Chr14:7434904 | 5.60E-232 | dispersed | |
Sed14g0722 | Sed-Chr14:7434904 | Sed14g1639 | Sed-Chr14:24568967 | 6.20E-240 | dispersed | |
Sed14g0722 | Sed-Chr14:7434904 | Sed10g0022 | Sed-Chr10:144158 | 1.90E-241 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0722 | K17686 | - | csv:101218801 | 1701.41 |