Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0722 ATGGCGACCAATTTCTGGTCCTTGGCGTGTATTCGGAGCCAGAGCCGCACCACTCTGCTGCCCCGCCCTCGTTATCCCTCCATGCTCAAATACCCCGTTGGGGTTTCGCCGCCGGAGAATAGCCCCCCCACCGCCGACTCCACGGCCTTCTTCTCCGTCACCGGAATGAGCTGTTCCGCCTGTGCCGGCTCCGTCGAGAAGGCCATCAAACGCCTCCCTGGCATTCGTCAAGCCGTCGTCGATGTTTTGAATGCCAAAGCTCGCGTCCAGTTTTACCCTACCTTCGTTCATGTGGATCAAATATGTGAAGCAATTAACGATGCAGGCTTTGAAGCAAGTATAGTCGACGATGATATGATTGAAAGATGTCGAATTCGTGTAATTGGGATGACTTGCACTTCTTGTTCCTCAACTGTGGAATCTACATTACAAGCAATTCGTGGAGTTCAAAATGCCCAAGTTGCATTAGCCACGGAAGAGGCAGAAGTTTGTTACGATCCAAGAATTTTGAACTACAATCAACTTCTCCAGGCCATTGAAGATTCTGGATTTGAAGCTTTACTTATTAGCACAGAAGAAGATGTGAGCAAGATACAGCTCCAAGTTGATGGAATGAGATCTGAGGATTCAATGAAATTGATTGGGAGCACTTTGGAAGCACTTCCTGGAGTTCTAGGAATCGATATTGACCCTGTACTCGGAAAACTTTCTTTGTCTTATAAGCCAAATGTCACCGGACCTCGGAATATAATCCAAGTAATTGAATCAACTGGATCTGGTCAATTTAAAGCAACAATATTTCCTGAAGAACATGACAGAGAAGCTTATAAAAAGGAGGAAATTAAGCAATATTACAGATCATTCTTATGGAGTCTGATATTTACAATTCCAGTATTTTTAAGCTCTATGGTCTTCACTTATGTGCCTGGTATTAAGAATGGGCTAGATGCCAAAATTGTCAATATGATGACTGTTGGGGAGCTGTTGAGGTGGGTTTTATCAACTCCTGTACAGTTCATTATTGGAAGGCGATTCTATACTGGTTCTTACAAAGCATTGCGCCATGGTTCTGCAAATATGGACGTATTGATTGCTCTGGGGACTAATGCAGCATATTTTTATTCAGTCTACATGGTCTTAAGATCTGCAACCTCAAGTGAATTTATGGCCACAGACTTTTTTGAGACCAGTTCCATGCTTATTTCATTCATTCTTCTTGGGAAATATCTAGAGGTCTTAGCTAAGGGAAAGACATCAGAGGCTATCGCCAAGCTTATGAAGTTGGTGCCTGAAACAGCGACCTTGCTTACTCTTGATAATGATGGAAATATCATTAGGGAAGAAGAAATTGATAGTAGATTGATACAAAAGAATGATGTGATTAAAGTCATTCCAGGGGCTAAGGTTGCTTCCGATGGAGTTGTAGTTTGGGGACAAAGTCATGTCAACGAAAGCATGATTACTGGGGAAGCCAAGGCGGTGGCAAAAAGAAGGGATGATACGGTGATTGGAGGCACTTTGAACGAGAATGGTGTTCTACATGTTAGAGCAACACACGTTGGCTCTGAAAGTGCTCTTTCACAGATTGTTCGACTTGTTGAATCAGCTCAGATGGCCAAGGCTCCAGTTCAGAAAATTGCGGATCGCATCTCTAAGTTTTTTGTGCCAATGGTTATAGTCTTTTCATTGACGACATGGCTCGTTTGGTTTCTTACTGGAAAATATGGCGGCTACCCAAAGTCCTGGATACCTTCTTCCATGGATAGCTTTGAACTGGCTCTCCAATTTGGCATTTCAGTTATGGTCATAGCCTGCCCGTGTGCTTTGGGCCTGGCAACTCCAACTGCTGTCATGGTTGGAACAGGAGTCGGTGCGTCAAAAGGTGTTTTAATTAAAGGAGGGCAAGCATTAGAGAGTGCTCACAAGGTGAATTGCATTGTGTTTGACAAAACTGGAACTCTTACGATTGGGAAGCCGGTTGTGGTGAACACAAAGCTACTAAAAAATGTGGTAAAAAAGATGGCTCTCGAAGAATTCTATGAACTAGTCGCTGCAACTGAGGTCAACAGCGAGCATCCATTGGCCAAAGCTGTTGTTGAATATGCTAAAAAGTTCAAAGAGCAGGATGATAGCCAAACTTGGCCTGAAGCACTGGAATTTATATCCATTACTGGACATGGTGTTAAGGCCATAGTTCAAAACAAAGAAGTAATTGCAGGCAACCAGAGTCTTATGTTAGATGAGCACATTTTCATACCCGTTGAAGCTGAAGAGATGCTAAAAGAAATCGAAGAAATGGCTCAAACTGGAATTTTGGTATCCATTGATAGGAAATTGACCGGGGTTATTGCCATATCTGATCCACTAAAACCAAGTGCTCGTGAGGTTATTTCCATGCTCAAGGCCATGAAAGTTAAATCCATTATGGTGACAGGTGACAATTGGGGGACAGCGAACTCCATAGCCAATCAGGTTGGGATTGATGACGTAATTGCAGAAGCTAAACCCGACCAGAAAGCAGAGGAAGTGAAGCGATTACAGTCTTTGGGTCATACGGTGGCAATGGTGGGCGACGGGATCAATGACTCCCCTGCACTTGTAGCTGCAGATGTAGGAATGGCAATTGGTGCAGGCACAGACATTGCCATTGAGGCAGCTGACATAGTTCTCATGAAAAGTCACTTGGAGGATGTCATAACAGCCATCGACCTTTCGAGGAAAACGTTTTCCAGGATCCGTTTGAACTACGGTTGGGCACTCGGTTACAATCTCCTCGGCATCCCTATTGCAGCAGGAGTACTATTCCCGTCAACTCGGTTTAGGTTACCGCCATGGATTGCAGGAGCAGCAATGGCAGCCTCCTCTGTTAGTGTTGTTTGCAGTTCTCTGTTGCTGAAGTACTACAAAAGACCCAAGAAGCTTGATACTCTTGAGATACAAGGCATTAGAGTTGAGTGA 2958 44.19 MATNFWSLACIRSQSRTTLLPRPRYPSMLKYPVGVSPPENSPPTADSTAFFSVTGMSCSACAGSVEKAIKRLPGIRQAVVDVLNAKARVQFYPTFVHVDQICEAINDAGFEASIVDDDMIERCRIRVIGMTCTSCSSTVESTLQAIRGVQNAQVALATEEAEVCYDPRILNYNQLLQAIEDSGFEALLISTEEDVSKIQLQVDGMRSEDSMKLIGSTLEALPGVLGIDIDPVLGKLSLSYKPNVTGPRNIIQVIESTGSGQFKATIFPEEHDREAYKKEEIKQYYRSFLWSLIFTIPVFLSSMVFTYVPGIKNGLDAKIVNMMTVGELLRWVLSTPVQFIIGRRFYTGSYKALRHGSANMDVLIALGTNAAYFYSVYMVLRSATSSEFMATDFFETSSMLISFILLGKYLEVLAKGKTSEAIAKLMKLVPETATLLTLDNDGNIIREEEIDSRLIQKNDVIKVIPGAKVASDGVVVWGQSHVNESMITGEAKAVAKRRDDTVIGGTLNENGVLHVRATHVGSESALSQIVRLVESAQMAKAPVQKIADRISKFFVPMVIVFSLTTWLVWFLTGKYGGYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASKGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVNTKLLKNVVKKMALEEFYELVAATEVNSEHPLAKAVVEYAKKFKEQDDSQTWPEALEFISITGHGVKAIVQNKEVIAGNQSLMLDEHIFIPVEAEEMLKEIEEMAQTGILVSIDRKLTGVIAISDPLKPSAREVISMLKAMKVKSIMVTGDNWGTANSIANQVGIDDVIAEAKPDQKAEEVKRLQSLGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSHLEDVITAIDLSRKTFSRIRLNYGWALGYNLLGIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLLLKYYKRPKKLDTLEIQGIRVE 985
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7434904 7441061 + Sed0002476.1 Sed14g0722 736440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0722 985 FunFam ATPase copper transporting beta 119 193 - -
Sed14g0722 985 ProSiteProfiles Heavy-metal-associated domain profile. 196 262 IPR006121 GO:0046872(InterPro)
Sed14g0722 985 SUPERFAMILY HMA, heavy metal-associated domain 122 192 IPR036163 GO:0046872(InterPro)
Sed14g0722 985 Pfam haloacid dehalogenase-like hydrolase 644 870 - -
Sed14g0722 985 FunFam Probable copper-transporting ATPase HMA5 755 913 - -
Sed14g0722 985 FunFam Copper-transporting ATPase HMA5 46 117 - -
Sed14g0722 985 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Sed14g0722 985 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Sed14g0722 985 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
Sed14g0722 985 PRINTS Copper-transporting ATPase 1 signature 145 166 - -
Sed14g0722 985 Gene3D - 614 913 IPR023214 -
Sed14g0722 985 Gene3D - 120 193 - -
Sed14g0722 985 SUPERFAMILY HAD-like 646 962 IPR036412 -
Sed14g0722 985 SUPERFAMILY HMA, heavy metal-associated domain 47 117 IPR036163 GO:0046872(InterPro)
Sed14g0722 985 NCBIfam HAD-IC family P-type ATPase 400 938 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0722 985 ProSiteProfiles Heavy-metal-associated domain profile. 121 187 IPR006121 GO:0046872(InterPro)
Sed14g0722 985 CDD HMA 51 113 IPR006121 GO:0046872(InterPro)
Sed14g0722 985 ProSitePatterns E1-E2 ATPases phosphorylation site. 649 655 IPR018303 -
Sed14g0722 985 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872(InterPro)
Sed14g0722 985 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 672 791 IPR023299 GO:0000166(InterPro)
Sed14g0722 985 SUPERFAMILY HMA, heavy metal-associated domain 193 259 IPR036163 GO:0046872(InterPro)
Sed14g0722 985 Gene3D - 736 787 IPR023299 GO:0000166(InterPro)
Sed14g0722 985 Gene3D - 654 735 IPR023299 GO:0000166(InterPro)
Sed14g0722 985 PRINTS P-type cation-transporting ATPase superfamily signature 803 813 - -
Sed14g0722 985 PRINTS P-type cation-transporting ATPase superfamily signature 879 891 - -
Sed14g0722 985 PRINTS P-type cation-transporting ATPase superfamily signature 647 661 - -
Sed14g0722 985 PRINTS P-type cation-transporting ATPase superfamily signature 781 792 - -
Sed14g0722 985 PRINTS P-type cation-transporting ATPase superfamily signature 483 497 - -
Sed14g0722 985 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Sed14g0722 985 NCBIfam copper ion binding protein 51 112 IPR006122 GO:0005507(InterPro)
Sed14g0722 985 NCBIfam copper ion binding protein 124 186 IPR006122 GO:0005507(InterPro)
Sed14g0722 985 SFLD p-type atpase 629 908 IPR044492 -
Sed14g0722 985 ProSitePatterns Heavy-metal-associated domain. 127 156 IPR017969 GO:0046872(InterPro)
Sed14g0722 985 CDD P-type_ATPase_Cu-like 286 952 - -
Sed14g0722 985 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 984 - -
Sed14g0722 985 Gene3D - 44 115 - -
Sed14g0722 985 FunFam Copper-transporting ATPase 1, putative 415 537 - -
Sed14g0722 985 Gene3D - 415 537 - -
Sed14g0722 985 SUPERFAMILY Calcium ATPase, transmembrane domain M 395 913 IPR023298 -
Sed14g0722 985 Pfam Heavy-metal-associated domain 51 111 IPR006121 GO:0046872(InterPro)
Sed14g0722 985 Pfam Heavy-metal-associated domain 125 185 IPR006121 GO:0046872(InterPro)
Sed14g0722 985 ProSiteProfiles Heavy-metal-associated domain profile. 47 113 IPR006121 GO:0046872(InterPro)
Sed14g0722 985 Gene3D - 195 268 - -
Sed14g0722 985 Pfam E1-E2 ATPase 428 625 - -
Sed14g0722 985 SFLD Haloacid Dehalogenase 629 908 - -
Sed14g0722 985 NCBIfam heavy metal translocating P-type ATPase 360 965 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Sed14g0722 985 SUPERFAMILY Calcium ATPase, transduction domain A 447 533 IPR008250 -
Sed14g0722 985 CDD HMA 125 186 IPR006121 GO:0046872(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3888 Sed-Chr1:68123553 Sed14g0722 Sed-Chr14:7434904 0.00E+00 dispersed
Sed01g3889 Sed-Chr1:68123553 Sed14g0722 Sed-Chr14:7434904 6.00E-305 dispersed
Sed05g3458 Sed-Chr5:43433441 Sed14g0722 Sed-Chr14:7434904 5.60E-232 dispersed
Sed14g0722 Sed-Chr14:7434904 Sed14g1639 Sed-Chr14:24568967 6.20E-240 dispersed
Sed14g0722 Sed-Chr14:7434904 Sed10g0022 Sed-Chr10:144158 1.90E-241 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0722 K17686 - csv:101218801 1701.41