Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0860 | ATGTGGGATCTGAACGATTGTCCTGATGAGATGAAAGAGGGCAATGAATCGGAAGCATCCATTGAGAAAGGAAAGGGAGTGGGTTCCCTTTCGGATTCAAGCTCCTCGGCCGTGGTTGTCGAAGACGGGCTCGATGAGGTTATGCAAATGGAGGAACCCAGCCCCGTGACTCGCCAGTTCTTCCCACTCGACGCCGCAACCACTGCTTCTTCCGCCTTCCCCCGGGCTCACTGGGTTGGAGTCAAATTCGCCCATTCCTATCCTAATAATTCGGTCAGCCCGGCCGAGCTTTCGCACCCGATAAAGAAGAGCCGCCGCGGACCGAGGTCTCGTAGCTCTCAGTACCGCGGCGTCACTTTCTACCGGAGAACCGGCCGATGGGAGTCACATATTTGGGATTGTGGAAAGCAAGTTTATCTTGGTGGATTTGATACCGCACATGCAGCTGCTCGTGCTTATGATAGAGCGGCTATTAAATTCCGAGGACGGGAGGCCGACATAAACTTCAGCATCGAAGATTACGAGGACGATTTGAAACAGATGGGAAATTTAACGAAAGAGGAATTTGTACATGTACTTCGCCGACAAAGCACTGGGTATCCTAGAGGCAGCTCTAAGTATAGAGGTGTAACGCTTCACAAGTGTGGTAGATGGGAAGCCAGAATGGGCCAATTTCTTGGCAAAAAGTATGTTTATTTGGGGTTGTTTGATACAGAAGTTGAAGCCGCAAGGGCGTATGATAAAGCTGCAATCAAGTGTAATGGCAAAGAAGCGGTCACCAATTTTGATCCCTCCATCTACGAGAATGAACTGAATCCCACAAATGATTCAACTAGGGATGTACCCGATCACAGTCTGGATTTGAGTTTGGGGAATTCAAGTTCAAAGCAAAATGACACCCCAAATGCTAATTCCATAGATCCACAACGCAATCAAGGATTTAGGCTTCCACAGGTTCATTGGGTGCAAGAATCAAGTGGAGGAAATGGAAACAAAAATTACAATGAAGAGATTAGAAACAGCAGGTATCTGGAGAGTGAAACTATGCAGCTGCTTAGCCAAACGCACATTCAATCTCCAAGTTCATTTGGGCAATTACTCAGCCGGCCGATGGCGGGTCGAGATCACAATCCAAGCCTCAGTTATCAAATACAATTTTCGGGGAGCAGTGGAATTGGAAGTGATCTATCACTGTCTTTGAGTGATCAAAATCAAGTTCTTGCAACAACTGCTGCAGCATCATCAGGATTCTCATCTTCCAAAAATTGGCTGCAAAAGAATGGGTTTCACTGTCTCATGAGACCCTCCAGCTGA | 1314 | 47.34 | MWDLNDCPDEMKEGNESEASIEKGKGVGSLSDSSSSAVVVEDGLDEVMQMEEPSPVTRQFFPLDAATTASSAFPRAHWVGVKFAHSYPNNSVSPAELSHPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGREADINFSIEDYEDDLKQMGNLTKEEFVHVLRRQSTGYPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKEAVTNFDPSIYENELNPTNDSTRDVPDHSLDLSLGNSSSKQNDTPNANSIDPQRNQGFRLPQVHWVQESSGGNGNKNYNEEIRNSRYLESETMQLLSQTHIQSPSSFGQLLSRPMAGRDHNPSLSYQIQFSGSSGIGSDLSLSLSDQNQVLATTAAASSGFSSSKNWLQKNGFHCLMRPSS | 437 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 17108621 | 17111324 | - | Sed0005586.1 | Sed14g0860 | 736578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0860 | 437 | ProSiteProfiles | AP2/ERF domain profile. | 114 | 170 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | SUPERFAMILY | DNA-binding domain | 113 | 171 | IPR016177 | GO:0003677(InterPro) | |
Sed14g0860 | 437 | PRINTS | Ethylene responsive element binding protein signature | 245 | 265 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | PRINTS | Ethylene responsive element binding protein signature | 207 | 218 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | CDD | AP2 | 114 | 169 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | SUPERFAMILY | DNA-binding domain | 205 | 265 | IPR016177 | GO:0003677(InterPro) | |
Sed14g0860 | 437 | Pfam | AP2 domain | 114 | 162 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | Pfam | AP2 domain | 205 | 255 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | CDD | AP2 | 205 | 265 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | FunFam | AP2-like ethylene-responsive transcription factor | 113 | 172 | - | - | |
Sed14g0860 | 437 | FunFam | AP2-like ethylene-responsive transcription factor | 205 | 265 | - | - | |
Sed14g0860 | 437 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 66 | 328 | - | - | |
Sed14g0860 | 437 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Sed14g0860 | 437 | SMART | rav1_2 | 114 | 176 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | SMART | rav1_2 | 206 | 269 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | ProSiteProfiles | AP2/ERF domain profile. | 206 | 263 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | MobiDBLite | consensus disorder prediction | 266 | 311 | - | - | |
Sed14g0860 | 437 | Gene3D | AP2/ERF domain | 205 | 264 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | Gene3D | AP2/ERF domain | 113 | 172 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Sed14g0860 | 437 | MobiDBLite | consensus disorder prediction | 91 | 114 | - | - | |
Sed14g0860 | 437 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Sed14g0860 | 437 | MobiDBLite | consensus disorder prediction | 287 | 311 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed05g3462 | Sed-Chr5:43468200 | Sed14g0860 | Sed-Chr14:17108621 | 7.80E-123 | dispersed | |
Sed07g2411 | Sed-Chr7:39948050 | Sed14g0860 | Sed-Chr14:17108621 | 5.90E-59 | dispersed | |
Sed10g0652 | Sed-Chr10:4456660 | Sed14g0860 | Sed-Chr14:17108621 | 1.80E-158 | dispersed | |
Sed13g1830 | Sed-Chr13:23227047 | Sed14g0860 | Sed-Chr14:17108621 | 2.40E-41 | dispersed | |
Sed14g0860 | Sed-Chr14:17108621 | Sed14g0948 | Sed-Chr14:18604434 | 3.70E-43 | dispersed | |
Sed14g0860 | Sed-Chr14:17108621 | Sed14g0861 | Sed-Chr14:17108621 | 1.80E-175 | tandem | |
Sed10g0651 | Sed-Chr10:4456660 | Sed14g0860 | Sed-Chr14:17108621 | 1.20E-166 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
40586 | PF00847 | AP2 | 7.00E-10 | CL0081 | Sed | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0860 | K09284 | - | csv:101214724 | 550.821 |