Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0861 ATGGGAGTCACATATTTGGTCCGCTTCCCTCTCTCTCTCTCTCTCTCTCTCTGCTTTTGGAATTTTGAAACAAATTTTATTTTATCTTTTTTCTCTCGTAGGGATTGTGGAAAGCAAGTTTATCTTGGTGGATTTGATACCGCACATGCAGCTGCTCGTGCTTATGATAGAGCGGCTATTAAATTCCGAGGACGGGAGGCCGACATAAACTTCAGCATCGAAGATTACGAGGACGATTTGAAACAGATGGGAAATTTAACGAAAGAGGAATTTGTACATGTACTTCGCCGACAAAGCACTGGGTATCCTAGAGGCAGCTCTAAGTATAGAGGTGTAACGCTTCACAAGTGTGGTAGATGGGAAGCCAGAATGGGCCAATTTCTTGGCAAAAAGTATGTTTATTTGGGGTTGTTTGATACAGAAGTTGAAGCCGCAAGGGCGTATGATAAAGCTGCAATCAAGTGTAATGGCAAAGAAGCGGTCACCAATTTTGATCCCTCCATCTACGAGAATGAACTGAATCCCACAAATGATTCAACTAGGGATGTACCCGATCACAGTCTGGATTTGAGTTTGGGGAATTCAAGTTCAAAGCAAAATGACACCCCAAATGCTAATTCCATAGATCCACAACGCAATCAAGGATTTAGGCTTCCACAGGTTCATTGGGTGCAAGAATCAAGTGGAGGAAATGGAAACAAAAATTACAATGAAGAGATTAGAAACAGCAGGTATCTGGAGAGTGAAACTATGCAGCTGCTTAGCCAAACGCACATTCAATCTCCAAGTTCATTTGGGCAATTACTCAGCCGGCCGATGGCGGGTCGAGATCACAATCCAAGCCTCAGTTATCAAATACAATTTTCGGGGAGCAGTGGAATTGGAAGTGATCTATCACTGTCTTTGAGTGATCAAAATCAAGTTCTTGCAACAACTGCTGCAGCATCATCAGGATTCTCATCTTCCAAAAATTGGCTGCAAAAGAATGGGTTTCACTGTCTCATGAGACCCTCCAGCTGA 1020 42.94 MGVTYLVRFPLSLSLSLCFWNFETNFILSFFSRRDCGKQVYLGGFDTAHAAARAYDRAAIKFRGREADINFSIEDYEDDLKQMGNLTKEEFVHVLRRQSTGYPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKEAVTNFDPSIYENELNPTNDSTRDVPDHSLDLSLGNSSSKQNDTPNANSIDPQRNQGFRLPQVHWVQESSGGNGNKNYNEEIRNSRYLESETMQLLSQTHIQSPSSFGQLLSRPMAGRDHNPSLSYQIQFSGSSGIGSDLSLSLSDQNQVLATTAAASSGFSSSKNWLQKNGFHCLMRPSS 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 17108621 17111324 - Sed0005586.2 Sed14g0861 736579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0861 339 PRINTS Ethylene responsive element binding protein signature 147 167 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 Gene3D AP2/ERF domain 107 166 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 Gene3D AP2/ERF domain 20 74 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 MobiDBLite consensus disorder prediction 189 213 - -
Sed14g0861 339 SMART rav1_2 29 78 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 SMART rav1_2 108 171 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 ProSiteProfiles AP2/ERF domain profile. 108 165 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 FunFam AP2-like ethylene-responsive transcription factor 107 167 - -
Sed14g0861 339 MobiDBLite consensus disorder prediction 168 213 - -
Sed14g0861 339 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 35 231 - -
Sed14g0861 339 Pfam AP2 domain 107 157 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 CDD AP2 107 167 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 SUPERFAMILY DNA-binding domain 107 167 IPR016177 GO:0003677(InterPro)
Sed14g0861 339 ProSiteProfiles AP2/ERF domain profile. 1 72 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Sed14g0861 339 SUPERFAMILY DNA-binding domain 36 73 IPR016177 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0651 Sed-Chr10:4456660 Sed14g0861 Sed-Chr14:17108621 7.30E-119 dispersed
Sed14g0861 Sed-Chr14:17108621 Sed14g0948 Sed-Chr14:18604434 2.20E-35 dispersed
Sed14g0860 Sed-Chr14:17108621 Sed14g0861 Sed-Chr14:17108621 1.80E-175 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40587 PF00847 AP2 4.90E-10 CL0081 Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0861 K09284 - csv:101214724 411.379