Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0865 | ATGGAACCCAGCGTCCACAACCTCATCCAATTGCTCTCCTCTACCGATTCCGATTGCCACGCCGCGGTCTCCAAGTGCATTTCTCGTCTCGGTCGGGGCCGGGTGGGCCACGCTCGATTCCGTAGCGCTCCTCTCCCTTTGCCTCAAACTCCTAAACCCTACTACGCCACTCCAATCCAACAGATCCCGCCTTCCCCCTCTACCCATCATTCTTTTGTCTCGTCTTTGACCGGCGACACAGACAGCAAGCACCTCTCCTCCGCCGGGAAGCCACCTCTCTCGACTTCTTCCCTCAAGAGGAAGTGCGGCAGCTCCGATCACTTGGGATCCGATCGATGCCATTGTTCCAAGAAGAGAAAACTGAGGGTGAAGAGGGTTGTGAGGGTGGCGGCGACAAGCTTGAAAATGGCGGATATTCCACCGGACGATTACTCGTGGAGAAAATACGGTCAAAAGCCTATTAAAGGCTCTCCTCATCCCAGAGGGTATTACAAGTGTAGCAGCGTGAGAGGTTGCCCAGCCCGGAAACACGTAGAACGGGCCGTAGACGATCCGGCGATGTTGGTCGTCACCTACGAAGGAGAACACAATCATACTCTCGCTCTATCCGAAACCTCCAGTCCTCGTAGCACATCGTGA | 639 | 55.24 | MEPSVHNLIQLLSSTDSDCHAAVSKCISRLGRGRVGHARFRSAPLPLPQTPKPYYATPIQQIPPSPSTHHSFVSSLTGDTDSKHLSSAGKPPLSTSSLKRKCGSSDHLGSDRCHCSKKRKLRVKRVVRVAATSLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPAMLVVTYEGEHNHTLALSETSSPRSTS | 212 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 17452343 | 17454177 | - | Sed0023555.1 | Sed14g0865 | 736583 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0865 | 212 | ProSiteProfiles | WRKY domain profile. | 135 | 201 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Sed14g0865 | 212 | MobiDBLite | consensus disorder prediction | 61 | 103 | - | - | |
Sed14g0865 | 212 | FunFam | WRKY transcription factor 65 | 124 | 201 | - | - | |
Sed14g0865 | 212 | SMART | WRKY_cls | 140 | 200 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Sed14g0865 | 212 | MobiDBLite | consensus disorder prediction | 54 | 112 | - | - | |
Sed14g0865 | 212 | Pfam | Plant zinc cluster domain | 99 | 138 | IPR018872 | - | |
Sed14g0865 | 212 | Gene3D | WRKY domain | 124 | 201 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Sed14g0865 | 212 | Pfam | WRKY DNA -binding domain | 142 | 198 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Sed14g0865 | 212 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 30 | 205 | IPR044810 | GO:0003700(InterPro) | |
Sed14g0865 | 212 | SUPERFAMILY | WRKY DNA-binding domain | 137 | 199 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed13g2093 | Sed-Chr13:25655946 | Sed14g0865 | Sed-Chr14:17452343 | 2.40E-44 | dispersed | |
Sed13g2094 | Sed-Chr13:25655946 | Sed14g0865 | Sed-Chr14:17452343 | 7.30E-23 | dispersed | |
Sed14g0865 | Sed-Chr14:17452343 | Sed05g2081 | Sed-Chr5:34023745 | 3.40E-18 | dispersed | |
Sed01g2685 | Sed-Chr1:21514376 | Sed14g0865 | Sed-Chr14:17452343 | 5.20E-58 | wgd | |
Sed10g0657 | Sed-Chr10:4510509 | Sed14g0865 | Sed-Chr14:17452343 | 2.70E-68 | wgd | |
Sed13g1775 | Sed-Chr13:22795985 | Sed14g0865 | Sed-Chr14:17452343 | 1.90E-55 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
40589 | PF03106 | WRKY | 2.00E-26 | CL0274 | Sed | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0865 | - | - | - | 0.0 |