Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0872 | ATGGATAACGAAGCTTCTAATAGTTCAACACAATCTGCAGTCAACAATCCAGCTCCAACAGTCCATAGACAGAATAATATAGGAGGGCATTCAACATCTATTTTATCTCCATCTGGAATATCATCTTGGGCTAGGAGTTTTAGAAATCCACAGCCACCCGAAGCAGCCGAAAATGACTCTAAAGCAGAAAATGTTGGGATGTCTGCAATTGCTCGTTTCGGTAGTGGCTTTGGATTGCGGATACCTTCAATGTCGCCTGTACGAGATGATGGTGTTGCAGATACCAAATCAGCAGCACAATCTGGTGTTTTCGAATCACTCACAAAAGGTTTAGTTGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAGGCACGCCATATTGTCTCACGGAACAAACGAAGATATCAGGAAGGAGGATTTGATTTGGATATGTCATATATAACTGAAAATATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGCCTTTTTGGATACCTTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAAATTTTTTGAAACTCATCATAAGGGAAAATATAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGAAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCATCTCATAAAATCATTTTGTCAAAGTGCATATGCATGGTTAAAAGAGGATATTGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGGTCTGCAGCCTCCTTTTATTCCTAAAGGTCAGATTGTATAGTATACTTCTCATAAGTTCTTCCAAACATCAGCAGAGGCCATTAACTATTTTAATCAGAAAAGATGTGTGGATGGAAAGGCTTTGGTTATCCCTAGCCAGATTGTTAGACATTCAAATCCTTTTATTTTCTTCTTCTTTTTCTTTTCTTTTTTTTTTCCTGATGCCTCTTTACTTGATGCAGAGGTATGTCAGGTATTTTGAGCACATTTTAACAAATTTCAGCGGAAATACTCCATCCGGACGGAGGTGCATGGTGAGAGGTTTTCGGCTTCACAAGTGCCCATATTGGGTTAGACCTTCCATTACAATATCAAATCACAGTGAGATTTTGTTCTCGACAAAAAATCATCCAAAGACAAAGGATTTAATGCCAGAAGATTTCTGGCTTAGGGCACCAAAGAAAGGATTTGTTGTCTTTGCACTGCCAGGTGAGCGTTGTTTGACAGAGTTATCTGGGGACTTCAAGATTCATTTCCATGACCGCCATGGAGATTTTTATTGTTGGTTAAATACAACAATGACAGAAAACAAAGTATTACTAAGTGACACTGATCTTGATGGTTTTGATAAGAGAAAACTTCCAACTCCTGAATTCCAGGTACAAGTTGTGATGATAGACTATGATGGTACATTACCAGCACGGTTCAAAACCGATTCTGCCGGAAAAGGATCTGATCGTCGCTCCATTCGTGATCGTGCATCGGGTCATGAAGCAGCTCAAACCAGCAGAAACAAAATTCCTGAGGATGAAGAAAATGATGACAATGTATTCTCTGATAGTGATGAAGAAAATGGCAACACAAAAACCAGTGTAGCTGAATCAACTTCTGGAAATGGAACTGCAAACGCAGACCATTCATCAACAGCCATTGCTTCAGAAAAGATTGGTAGTTTATCTCTAGGGAATGAGAAAAAGTTGGAAATGAAGGATTCATCAAAAGAAGCTAACATTGATGGGTTTGAGACCCCAAATTTGGGCTCAGCAATGGCAAGTGATTTCAAGGCAATAGCTGCTGATGCGTCAGTTTTCAGTTTTGGGGATGAAGAAGATTTTGATAGTGAATAA | 1896 | 39.35 | MDNEASNSSTQSAVNNPAPTVHRQNNIGGHSTSILSPSGISSWARSFRNPQPPEAAENDSKAENVGMSAIARFGSGFGLRIPSMSPVRDDGVADTKSAAQSGVFESLTKGLVDTSQNAVKAMQVKARHIVSRNKRRYQEGGFDLDMSYITENIIAMGFPAGHMSSGLFGYLEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCQSAYAWLKEDIENVVVVHCKAGMARTGLMVCSLLLFLKVRLYSILLISSSKHQQRPLTILIRKDVWMERLWLSLARLLDIQILLFSSSFSFLFFFLMPLYLMQRYVRYFEHILTNFSGNTPSGRRCMVRGFRLHKCPYWVRPSITISNHSEILFSTKNHPKTKDLMPEDFWLRAPKKGFVVFALPGERCLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPEFQVQVVMIDYDGTLPARFKTDSAGKGSDRRSIRDRASGHEAAQTSRNKIPEDEENDDNVFSDSDEENGNTKTSVAESTSGNGTANADHSSTAIASEKIGSLSLGNEKKLEMKDSSKEANIDGFETPNLGSAMASDFKAIAADASVFSFGDEEDFDSE | 631 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 17546161 | 17552201 | + | Sed0010691.2 | Sed14g0872 | 736590 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0872 | 631 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 249 | 300 | IPR000387 | GO:0016311(InterPro) | |
Sed14g0872 | 631 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Sed14g0872 | 631 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 251 | 261 | IPR016130 | GO:0016311(InterPro) | |
Sed14g0872 | 631 | MobiDBLite | consensus disorder prediction | 496 | 528 | - | - | |
Sed14g0872 | 631 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Sed14g0872 | 631 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 | 120 | 278 | - | - | |
Sed14g0872 | 631 | ProSiteProfiles | C2 tensin-type domain profile. | 357 | 484 | IPR014020 | - | |
Sed14g0872 | 631 | MobiDBLite | consensus disorder prediction | 539 | 572 | - | - | |
Sed14g0872 | 631 | Pfam | Polymorphic toxin system, DSP-PTPase phosphatase | 214 | 269 | - | - | |
Sed14g0872 | 631 | MobiDBLite | consensus disorder prediction | 492 | 597 | - | - | |
Sed14g0872 | 631 | SMART | PTEN_C2_2 | 355 | 483 | IPR014020 | - | |
Sed14g0872 | 631 | Pfam | PTEN2, C2 domain | 357 | 485 | - | - | |
Sed14g0872 | 631 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 122 | 272 | IPR051281 | GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER) | |
Sed14g0872 | 631 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 135 | 350 | IPR029023 | - | |
Sed14g0872 | 631 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 148 | 270 | IPR029021 | - | |
Sed14g0872 | 631 | Gene3D | Protein tyrosine phosphatase superfamily | 120 | 289 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed14g0871 | Sed-Chr14:17546161 | Sed14g0872 | Sed-Chr14:17546161 | 0.00E+00 | tandem | |
Sed14g0872 | Sed-Chr14:17546161 | Sed14g0873 | Sed-Chr14:17546161 | 4.60E-220 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0872 | K01110 | - | csv:101213277 | 916.761 |