Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0905 ATGGGTCGCGCCAATCTCGTAATTGCATTACTATCCCTTCTTTGTTTGCTCTCCTTCCCCTTCCCCACCGCCGCCCAACTCCGGCAAAACTTCTACTCCAACATCTGCCCAAACGTCGAATCCATTGTCCGCAGAGAGGTCACTAAGAAGTTTCAGCAAACTTTTGTCACTGTTCCGGCCACCCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCGTCTGTGATAATTGCTTCGAGGGGGTCGAAGAAGGCCGAGAAGGATCATTCGGACAACCTGTCACTCGCCGGAGATGGATTCGACACGGTGATCAAGGCGAAAGCGGCGGTGGACGCGGTCCCTCAATGCCGAAACAGAGTGTCGTGTGCGGACATTCTTGCAATGGCCACTAGGGATGTCATTGCACTGTCCGGCGGGCCGTCGTACGCGGTGGAGCTGGGGAGACTAGACGGGCTGGTTTCACGAGCCTCGGACGTCAACGGTCGACTCCCAGGGCCCACCTTTAACCTCAACCAACTCAATTCTCTCTTTGCTGCTAACGGCCTCACGCAACAAGACATGGTCGCTCTCTCTGCGGCTCACACGGTGGGGTTTTCGCACTGTGGAAAATTCTCAAACAGAATTTACAACTTTGCCCCTGGGAGACCCGTTGATCCATCACTGAACAGAACCTACGCAACCCAGCTACAGCAAATGTGTCCCAGAAATGTGGACCCCAGAATAGCGATCAACATGGATCCAAACACTCCCAGAGCATTTGACAACGTGTACTTCAAAAATCTCCAGCAGGGGAAGGGTTTATTCACCTCGGACCAGGTTCTGTTCACCGACGCCCGGTCCAGACCGACAGTCAATGCTTGGGCCGCCAATTCCCAAGCCTTTAATAATGCATTTGTTCAAGCTATGACCAAATTGGGCCGGGTCGGAGTCAAGTCCGGTCGAAACGGGAATATTCGACGCGATTGTGGAGCTTTTAATTGA 990 53.03 MGRANLVIALLSLLCLLSFPFPTAAQLRQNFYSNICPNVESIVRREVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASRGSKKAEKDHSDNLSLAGDGFDTVIKAKAAVDAVPQCRNRVSCADILAMATRDVIALSGGPSYAVELGRLDGLVSRASDVNGRLPGPTFNLNQLNSLFAANGLTQQDMVALSAAHTVGFSHCGKFSNRIYNFAPGRPVDPSLNRTYATQLQQMCPRNVDPRIAINMDPNTPRAFDNVYFKNLQQGKGLFTSDQVLFTDARSRPTVNAWAANSQAFNNAFVQAMTKLGRVGVKSGRNGNIRRDCGAFN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 17988303 17991203 + Sed0008289.1 Sed14g0905 736623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0905 329 FunFam Peroxidase 167 308 - -
Sed14g0905 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Sed14g0905 329 FunFam Peroxidase 30 175 - -
Sed14g0905 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 Pfam Peroxidase 43 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601(InterPro)
Sed14g0905 329 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 Gene3D Peroxidase, domain 2 167 308 - -
Sed14g0905 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Sed14g0905 329 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 PANTHER - 14 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Sed14g0905 329 Gene3D - 30 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g3431 Sed-Chr5:43258200 Sed14g0905 Sed-Chr14:17988303 9.90E-142 dispersed
Sed08g2534 Sed-Chr8:38049478 Sed14g0905 Sed-Chr14:17988303 5.50E-76 dispersed
Sed11g2264 Sed-Chr11:35900894 Sed14g0905 Sed-Chr14:17988303 3.10E-111 dispersed
Sed12g1902 Sed-Chr12:30187499 Sed14g0905 Sed-Chr14:17988303 7.00E-40 dispersed
Sed13g1946 Sed-Chr13:24376363 Sed14g0905 Sed-Chr14:17988303 5.00E-61 dispersed
Sed13g2085 Sed-Chr13:25598754 Sed14g0905 Sed-Chr14:17988303 2.80E-112 dispersed
Sed13g2086 Sed-Chr13:25598754 Sed14g0905 Sed-Chr14:17988303 4.40E-92 dispersed
Sed14g0905 Sed-Chr14:17988303 Sed14g1212 Sed-Chr14:21362100 8.60E-61 dispersed
Sed10g0702 Sed-Chr10:4909231 Sed14g0905 Sed-Chr14:17988303 6.30E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0905 K00430 - csv:101206860 575.859