Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0907 ATGAGCTGCAACGGTTGCCGCGTTCTCCGTAAGGGCTGCACCGAATCCTGCATCCTCCGGCCTTGCTTGCAGTGGATCGGCACCGCCGAAGCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATCTCCTTCCTCTCCGCCGTTCCACATTCTCAAAGACCTTCTTTGTTTCAGTCTCTGTTATTCGAAGCCTGCGGCCGAACCGTCAACCCGGTCAACGGCGCCGTCGGTCTTCTCTGGACCGGCCACTGGCACATCTGCCAGGCCGCCGTCGACACCGTCTTGCGAGGCGGCACGTTGCGGCCTATCAACGAATTCATTGCCTCCGACCAGACTCATTCCGAGGCCGAAGTCGCCTATTCCGACATCTGGAAGCTTCCAGATTCCGTTCCCAGTTCTCGATTCTCCAATTCCCGGTCCAGGATCTCCCCCAAACTCAACGATCTTGATCTACGATTGACGCCGAATCTTCCCGCCAAAACAATCCGGCGAGCCGGTTCTCCCTCCATGAATTCCGACGAATCCGATTCCAGCTTCGAAAGTGGCCTGATTAATCACCATCACTGCCAGTTAGAAGAAACAACGGCTGAAAAGAAACTTCTCAATTTATTCGTTTGA 639 56.34 MSCNGCRVLRKGCTESCILRPCLQWIGTAEAQGHATVFVAKFFGRAGLISFLSAVPHSQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGHWHICQAAVDTVLRGGTLRPINEFIASDQTHSEAEVAYSDIWKLPDSVPSSRFSNSRSRISPKLNDLDLRLTPNLPAKTIRRAGSPSMNSDESDSSFESGLINHHHCQLEETTAEKKLLNLFV 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 18051836 18052910 - Sed0004474.1 Sed14g0907 736625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0907 212 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Sed14g0907 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 211 - GO:0010468(PANTHER)
Sed14g0907 212 MobiDBLite consensus disorder prediction 172 186 - -
Sed14g0907 212 MobiDBLite consensus disorder prediction 167 186 - -
Sed14g0907 212 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed12g2071 Sed-Chr12:31483170 Sed14g0907 Sed-Chr14:18051836 3.40E-37 dispersed
Sed01g2708 Sed-Chr1:21710980 Sed14g0907 Sed-Chr14:18051836 1.10E-44 wgd
Sed10g0704 Sed-Chr10:4931641 Sed14g0907 Sed-Chr14:18051836 9.10E-83 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40592 PF03195 LOB 4.70E-25 No_clan Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0907 - - - 0.0