Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed14g0919 | ATGTTTGATGGAACTTGTCATGGTATCTTAGGTGTGCAACCAAGTGATTATACCGTTCCGGAGGAAGTTAAAGCTGCAGGTTTCCAACTTTGTGCTGATGAACTCGGGTCTATCGTTGAAGGCCACGATACGAAGAAGTACAAATTTCATGGTGGCGTTGAAGGGATTGCTCAAAAGCTATGTACATCTACAGCAACTGGGCTCAATGCTGATGCTGATGCACTCAACCGAAGGCAAGAGCTTTATGGGATTAATAAATTTGCGGAGAGCGAACAACGGAGCTTCTTGGTGTTTGTTTGGGAGGCCCTCCAAGACATGACTCTCATGATCCTTGGACTATGTGCTTTTGTCTCTTTGGTAGTCGGCATAATAACGGAAGGATGGCCACATGGAGCTCACGACGGCCTTGGAATTGTTGCCAGTATCTTGTTAGTTGTATTTGTCACGGCGACTAGCGATTATCGACAATCCTTGCAGTTCAAGGACTTGGATAAGGAGAAGAAGAAGATATCCATTCAGGTTACAAGGAGTGGTTATAGACAGAAAATGTCAATCTATGATTTACTTCCTGGAGATATTGTTCACCTCTCTCTTGGTGATCAAGTGCCTGCCGATGGACTATTTGTTTCGGGGTTTTCCGTGTTGATTGATGAGTCGAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGGGTGCAGAAAACCCTTTTCTTCTATCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATGGTTACTACTGTTGGGATGAGAACCCAATGGGGTAAGTTGATGGCCACACTCAGTGAAGGTGGAGATGATGAGACCCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTTTTCTTTGCCGTCATAACTTTCGCGGTGTTGGTTCAAGGATTGGTTAGCCATAAACTTCGAGAAGGAACTCACTGGAGCTGGTCTGGAGATGATGCATTGGCAATATTGGAATTCTTTGCTGTTGCAGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGACTTCCTTTGGCCGTGACATTAAGCCTTGCCTTCGCCATGAAGAAAATGATGAATGATAAAGCACTCGTCCGTCACCTGGCCGCTTGTGAAACGATGGGTTCTGCCACAAGTATTTGCAGTGACAAAACTGGAACAATCACTACAAATCGCATGACAGTCGTCAAATCATGCATTTGCATGAATGTCGAGGATTCGAGTAATAATCAATCAGGCTTCTGCTCTAATCTCTCAGCCTCTGTTGCCAAACTTTTGCTACAATCAATATTCAACAACACTGGGGGAGAAGTTGTAATCAACAAAGATGGCAAGCTTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTACAGTTCGCTCTTTCACTTGGTGGTGATTTTCAGGCTGAGAGACTGGTAGGTAAACTTATTAAAGTTGAACCATTTAACTCTTTGAAAAAGCGGATGGGTGTGGTCCTACAATTTCCTGAAGGTGGTTTTCGAGCTCATACTAAAGGTGCTTCAGAGATAGTATTAGCTGCCTGTGACAAGGTGATCAACTCGAGTGGCGAGGTTGTTCCTTTAGATGAAGATTCCACCAACCAACTCAATGTTATTATCAACCAATTTGCTGGTGAGGCTCTCCGAACACTTTGCCTCGCCTATATGGAACTGGAAAACGGATTCTCTGCGAGCGATTCTATTCCGCTTTCTGGTTACACCTGCATTGGCATTGTTGGTATTAAAGATCCTGTGCGCCCTGGTGTCAAGGAGTCCGTTGCCGTGTGTCGTTCAGCTGGTATTACTGTACGAATGGTTACGGGTGACAATATCAATACTGCTAAAGCTATTGCCAAGGAATGTGGCATCCTCACTGATGATGGCATTGCCATTGAGGGTCCAGATTTCAGAGAGAAAAGTCAAGAGGAATTGCTTAAAATTATCCCCAAAATTCAGGTGATGGCTCGATCTTCACCTCTTGATAAGCACACTCTAGTCAAGCATTTGCGGACCACCTTTGATGAGGTTGTTGCAGTTACTGGTGATGGGACGAACGATGCTCCTGCACTTCACGAAGCAGATATTGGACTCGCAATGGGCATCGCTGGAACTGAGGTTGCCAAAGAGAGTGCTGATGTGATCATTCTTGATGATAATTTCTCTACAATTGTGACTGTGGGAAAATGGGGTCGTTCTGTTTACATAAATATTCAAAAATTTGTGCAATTCCAGCTGACTGTAAACATTGTGGCACTGATCGTGAACTTCACTTCGGCTTGTTTGACAGGCAATGCTCCTCTTACTGCCGTTCAGCTCTTGTGGGTGAACATGATAATGGACACACTTGGAGCTTTGGCTCTCGCCACCGAGCCTCCAAACGATGACTTGATGAAGCGCTTACCTGTTGGGAGGAGAGGAAGTTTTATCAGCAATGTCATGTGGAGAAACATCTTGGGCCAGTCCTTTTATCAGTTCTCAGTGATATGGTTTTTGCAGGCCAAAGGAAAAGCAGCTTTTGATTTAGACGGCCCTGATTCGGATCTGATACTGAATACCCTCATCTTCAATTGCTTTGTGTTCTGTCAGATTTTTAACGAAATAAGCTCGAGGGAGATGGAGAAAATCAATGTGTTCAAAGGCATACTCAATAACTATGTGTTCGCAGCTGTGATTGGTTCCACCCTTTTGTTCCAAATAATCATCATTGAATTCCTGGGAACATTTGCAAGCACAACCCCTCTGAGTTTGTCACAGTGGCTGTTCAGTGTGGTGATTGGATTTATAGGCATGCCAATAGCTGCTATTCTGAAGACAGTTCCAGTATGA | 2844 | 44.3 | MFDGTCHGILGVQPSDYTVPEEVKAAGFQLCADELGSIVEGHDTKKYKFHGGVEGIAQKLCTSTATGLNADADALNRRQELYGINKFAESEQRSFLVFVWEALQDMTLMILGLCAFVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRSGYRQKMSIYDLLPGDIVHLSLGDQVPADGLFVSGFSVLIDESSLTGESEPVMVGAENPFLLSGTKVQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLVSHKLREGTHWSWSGDDALAILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTITTNRMTVVKSCICMNVEDSSNNQSGFCSNLSASVAKLLLQSIFNNTGGEVVINKDGKLELLGTPTETALLQFALSLGGDFQAERLVGKLIKVEPFNSLKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEVVPLDEDSTNQLNVIINQFAGEALRTLCLAYMELENGFSASDSIPLSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIAKECGILTDDGIAIEGPDFREKSQEELLKIIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNIVALIVNFTSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRLPVGRRGSFISNVMWRNILGQSFYQFSVIWFLQAKGKAAFDLDGPDSDLILNTLIFNCFVFCQIFNEISSREMEKINVFKGILNNYVFAAVIGSTLLFQIIIIEFLGTFASTTPLSLSQWLFSVVIGFIGMPIAAILKTVPV | 947 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 18280057 | 18285484 | + | Sed0019192.2 | Sed14g0919 | 736637 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed14g0919 | 947 | PRINTS | P-type cation-transporting ATPase superfamily signature | 686 | 705 | - | - | |
| Sed14g0919 | 947 | PRINTS | P-type cation-transporting ATPase superfamily signature | 386 | 400 | - | - | |
| Sed14g0919 | 947 | PRINTS | P-type cation-transporting ATPase superfamily signature | 217 | 231 | - | - | |
| Sed14g0919 | 947 | PRINTS | P-type cation-transporting ATPase superfamily signature | 583 | 594 | - | - | |
| Sed14g0919 | 947 | PRINTS | P-type cation-transporting ATPase superfamily signature | 710 | 722 | - | - | |
| Sed14g0919 | 947 | PRINTS | P-type cation-transporting ATPase superfamily signature | 605 | 615 | - | - | |
| Sed14g0919 | 947 | SFLD | C1.7: P-type atpase like | 368 | 738 | - | - | |
| Sed14g0919 | 947 | PANTHER | CATION TRANSPORTING ATPASE | 33 | 947 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Sed14g0919 | 947 | Gene3D | - | 73 | 269 | - | - | |
| Sed14g0919 | 947 | FunFam | Calcium-transporting ATPase | 579 | 731 | - | - | |
| Sed14g0919 | 947 | Gene3D | - | 101 | 944 | - | - | |
| Sed14g0919 | 947 | CDD | P-type_ATPase_Ca_PMCA-like | 75 | 819 | - | - | |
| Sed14g0919 | 947 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 388 | 394 | IPR018303 | - | |
| Sed14g0919 | 947 | Pfam | Cation transporter/ATPase, N-terminus | 50 | 118 | IPR004014 | - | |
| Sed14g0919 | 947 | Gene3D | - | 396 | 590 | IPR023299 | GO:0000166(InterPro) | |
| Sed14g0919 | 947 | NCBIfam | HAD-IC family P-type ATPase | 652 | 768 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Sed14g0919 | 947 | NCBIfam | HAD-IC family P-type ATPase | 328 | 412 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Sed14g0919 | 947 | FunFam | Calcium-transporting ATPase | 703 | 947 | - | - | |
| Sed14g0919 | 947 | SUPERFAMILY | HAD-like | 385 | 791 | IPR036412 | - | |
| Sed14g0919 | 947 | PRINTS | H+-transporting ATPase (proton pump) signature | 718 | 743 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Sed14g0919 | 947 | PRINTS | H+-transporting ATPase (proton pump) signature | 686 | 702 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Sed14g0919 | 947 | PRINTS | H+-transporting ATPase (proton pump) signature | 542 | 560 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Sed14g0919 | 947 | Gene3D | - | 383 | 731 | IPR023214 | - | |
| Sed14g0919 | 947 | FunFam | Calcium-transporting ATPase | 396 | 590 | - | - | |
| Sed14g0919 | 947 | Pfam | E1-E2 ATPase | 170 | 365 | - | - | |
| Sed14g0919 | 947 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 50 | 946 | IPR023298 | - | |
| Sed14g0919 | 947 | Pfam | Cation transporting ATPase, C-terminus | 771 | 944 | IPR006068 | - | |
| Sed14g0919 | 947 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 392 | 595 | IPR023299 | GO:0000166(InterPro) | |
| Sed14g0919 | 947 | FunFam | Calcium-transporting ATPase | 149 | 269 | - | - | |
| Sed14g0919 | 947 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 44 | 947 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Sed14g0919 | 947 | SFLD | p-type atpase | 368 | 738 | IPR044492 | - | |
| Sed14g0919 | 947 | SUPERFAMILY | Calcium ATPase, transduction domain A | 172 | 266 | IPR008250 | - | |
| Sed14g0919 | 947 | Pfam | haloacid dehalogenase-like hydrolase | 580 | 700 | - | - | |
| Sed14g0919 | 947 | Pfam | Cation transport ATPase (P-type) | 446 | 524 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed10g0740 | Sed-Chr10:5074296 | Sed14g0919 | Sed-Chr14:18280057 | 0.00E+00 | dispersed | |
| Sed13g1802 | Sed-Chr13:23042008 | Sed14g0919 | Sed-Chr14:18280057 | 0.00E+00 | dispersed | |
| Sed14g0919 | Sed-Chr14:18280057 | Sed14g0923 | Sed-Chr14:18280057 | 0.00E+00 | dispersed | |
| Sed14g0918 | Sed-Chr14:18280057 | Sed14g0919 | Sed-Chr14:18280057 | 0.00E+00 | tandem | |
| Sed14g0919 | Sed-Chr14:18280057 | Sed14g0920 | Sed-Chr14:18280057 | 0.00E+00 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed14g0919 | K01537 | - | csv:101212315 | 1696.4 |