Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0920 ATGGAGAGGTTTTTGGAGAAGAACTTCGGGGGCGTCAAAGCCAAGAACTCCTCCGAGGAGGTGCTGCAGAGATGGAGGGAGCTCTGCGGCGTCGTCAAGAACCCGAAGAGGCGGTTTCGCTTCACGGCCAATCTTTCCAAGCGCATTGAAGCCGCTGCTATGCGCCAGAATAATCAGGAGAAGTTGAGGATTGCAGTTTTAGTCTCAAAAGCTGCATTTCAATTCATCCAAGGTGTGCAACCAAGTGATTATACCGTTCCGGAGGAAGTTAAAGCTGCAGGTTTCCAACTTTGTGCTGATGAACTCGGGTCTATCGTTGAAGGCCACGATACGAAGAAGTACAAATTTCATGGTGGCGTTGAAGGGATTGCTCAAAAGCTATGTACATCTACAGCAACTGGGCTCAATGCTGATGCTGATGCACTCAACCGAAGGCAAGAGCTTTATGGGATTAATAAATTTGCGGAGAGCGAACAACGGAGCTTCTTGGTGTTTGTTTGGGAGGCCCTCCAAGACATGACTCTCATGATCCTTGGACTATGTGCTTTTGTCTCTTTGGTAGTCGGCATAATAACGGAAGGATGGCCACATGGAGCTCACGACGGCCTTGGAATTGTTGCCAGTATCTTGTTAGTTGTATTTGTCACGGCGACTAGCGATTATCGACAATCCTTGCAGTTCAAGGACTTGGATAAGGAGAAGAAGAAGATATCCATTCAGGTTACAAGGAGTGGTTATAGACAGAAAATGTCAATCTATGATTTACTTCCTGGAGATATTGTTCACCTCTCTCTTGGTGATCAAGTGCCTGCCGATGGACTATTTGTTTCGGGGTTTTCCGTGTTGATTGATGAGTCGAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGGGTGCAGAAAACCCTTTTCTTCTATCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATGGTTACTACTGTTGGGATGAGAACCCAATGGGGTAAGTTGATGGCCACACTCAGTGAAGGTGGAGATGATGAGACCCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTTTTCTTTGCCGTCATAACTTTCGCGGTGTTGGTTCAAGGATTGGTTAGCCATAAACTTCGAGAAGGAACTCACTGGAGCTGGTCTGGAGATGATGCATTGGCAATATTGGAATTCTTTGCTGTTGCAGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGACTTCCTTTGGCCGTGACATTAAGCCTTGCCTTCGCCATGAAGAAAATGATGAATGATAAAGCACTCGTCCGTCACCTGGCCGCTTGTGAAACGATGGGTTCTGCCACAAGTATTTGCAGTGACAAAACTGGAACAATCACTACAAATCGCATGACAGTCGTCAAATCATGCATTTGCATGAATGTCGAGGATTCGAGTAATAATCAATCAGGCTTCTGCTCTAATCTCTCAGCCTCTGTTGCCAAACTTTTGCTACAATCAATATTCAACAACACTGGGGGAGAAGTTGTAATCAACAAAGATGGCAAGCTTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTACAGTTCGCTCTTTCACTTGGTGGTGATTTTCAGGCTGAGAGACTGGTAGGTAAACTTATTAAAGTTGAACCATTTAACTCTTTGAAAAAGCGGATGGGTGTGGTCCTACAATTTCCTGAAGGTGGTTTTCGAGCTCATACTAAAGGTGCTTCAGAGATAGTATTAGCTGCCTGTGACAAGGTGATCAACTCGAGTGGCGAGGTTGTTCCTTTAGATGAAGATTCCACCAACCAACTCAATGTTATTATCAACCAATTTGCTGGTGAGGCTCTCCGAACACTTTGCCTCGCCTATATGGAACTGGAAAACGGATTCTCTGCGAGCGATTCTATTCCGCTTTCTGGTTACACCTGCATTGGCATTGTTGGTATTAAAGATCCTGTGCGCCCTGGTGTCAAGGAGTCCGTTGCCGTGTGTCGTTCAGCTGGTATTACTGTACGAATGGTTACGGGTGACAATATCAATACTGCTAAAGCTATTGCCAAGGAATGTGGCATCCTCACTGATGATGGCATTGCCATTGAGGGTCCAGATTTCAGAGAGAAAAGTCAAGAGGAATTGCTTAAAATTATCCCCAAAATTCAGGTGATGGCTCGATCTTCACCTCTTGATAAGCACACTCTAGTCAAGCATTTGCGGACCACCTTTGATGAGGTTGTTGCAGTTACTGGTGATGGGACGAACGATGCTCCTGCACTTCACGAAGCAGATATTGGACTCGCAATGGGCATCGCTGGAACTGAGGTTGCCAAAGAGAGTGCTGATGTGATCATTCTTGATGATAATTTCTCTACAATTGTGACTGTGGGAAAATGGGGTCGTTCTGTTTACATAAATATTCAAAAATTTGTGCAATTCCAGCTGACTGTAAACATTGTGGCACTGATCGTGAACTTCACTTCGGCTTGTTTGACAGGTTTAGTATCACAACCACATATAGTGTTTGGTTCACTCATTTTACTAGCTTGTTACTTTTCCTCGGCTAACCTTCTTGTATAA 2589 44.84 MERFLEKNFGGVKAKNSSEEVLQRWRELCGVVKNPKRRFRFTANLSKRIEAAAMRQNNQEKLRIAVLVSKAAFQFIQGVQPSDYTVPEEVKAAGFQLCADELGSIVEGHDTKKYKFHGGVEGIAQKLCTSTATGLNADADALNRRQELYGINKFAESEQRSFLVFVWEALQDMTLMILGLCAFVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRSGYRQKMSIYDLLPGDIVHLSLGDQVPADGLFVSGFSVLIDESSLTGESEPVMVGAENPFLLSGTKVQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLVSHKLREGTHWSWSGDDALAILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTITTNRMTVVKSCICMNVEDSSNNQSGFCSNLSASVAKLLLQSIFNNTGGEVVINKDGKLELLGTPTETALLQFALSLGGDFQAERLVGKLIKVEPFNSLKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEVVPLDEDSTNQLNVIINQFAGEALRTLCLAYMELENGFSASDSIPLSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIAKECGILTDDGIAIEGPDFREKSQEELLKIIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNIVALIVNFTSACLTGLVSQPHIVFGSLILLACYFSSANLLV 862
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 18280057 18285484 + Sed0019192.3 Sed14g0920 736638
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0920 862 Gene3D - 140 336 - -
Sed14g0920 862 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Sed14g0920 862 PANTHER CATION TRANSPORTING ATPASE 77 837 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Sed14g0920 862 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0920 862 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0920 862 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0920 862 FunFam Calcium-transporting ATPase 216 336 - -
Sed14g0920 862 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 662 IPR023299 GO:0000166(InterPro)
Sed14g0920 862 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Sed14g0920 862 Gene3D - 17 77 - -
Sed14g0920 862 FunFam Calcium-transporting ATPase 463 657 - -
Sed14g0920 862 Pfam E1-E2 ATPase 237 432 - -
Sed14g0920 862 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Sed14g0920 862 Pfam haloacid dehalogenase-like hydrolase 647 767 - -
Sed14g0920 862 NCBIfam HAD-IC family P-type ATPase 395 479 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0920 862 NCBIfam HAD-IC family P-type ATPase 719 838 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0920 862 Pfam Cation transport ATPase (P-type) 513 591 - -
Sed14g0920 862 Gene3D - 168 835 - -
Sed14g0920 862 Gene3D - 463 657 IPR023299 GO:0000166(InterPro)
Sed14g0920 862 SFLD Haloacid Dehalogenase 435 805 - -
Sed14g0920 862 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 837 IPR023298 -
Sed14g0920 862 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Sed14g0920 862 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Sed14g0920 862 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Sed14g0920 862 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Sed14g0920 862 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Sed14g0920 862 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Sed14g0920 862 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516(InterPro)
Sed14g0920 862 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 836 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Sed14g0920 862 Gene3D - 450 798 IPR023214 -
Sed14g0920 862 FunFam Calcium-transporting ATPase 17 77 - -
Sed14g0920 862 FunFam Calcium-transporting ATPase 646 798 - -
Sed14g0920 862 SFLD p-type atpase 435 805 IPR044492 -
Sed14g0920 862 SUPERFAMILY HAD-like 452 829 IPR036412 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0918 Sed-Chr14:18280057 Sed14g0920 Sed-Chr14:18280057 0.00E+00 dispersed
Sed14g0920 Sed-Chr14:18280057 Sed14g0923 Sed-Chr14:18280057 0.00E+00 dispersed
Sed14g0919 Sed-Chr14:18280057 Sed14g0920 Sed-Chr14:18280057 0.00E+00 tandem
Sed14g0920 Sed-Chr14:18280057 Sed14g0921 Sed-Chr14:18280057 0.00E+00 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0920 K01537 - csv:101212315 1519.21