Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0923 ATGTTTGATGGAACTTGTCATGGTATCTTAGGTGTGCAACCAAGTGATTATACCGTTCCGGAGGAAGTTAAAGCTGCAGGTTTCCAACTTTGTGCTGATGAACTCGGGTCTATCGTTGAAGGCCACGATACGAAGAAGTACAAATTTCATGGTGGCGTTGAAGGGATTGCTCAAAAGCTATGTACATCTACAGCAACTGGGCTCAATGCTGATGCTGATGCACTCAACCGAAGGCAAGAGCTTTATGGGATTAATAAATTTGCGGAGAGCGAACAACGGAGCTTCTTGGTGTTTGTTTGGGAGGCCCTCCAAGACATGACTCTCATGATCCTTGGACTATGTGCTTTTGTCTCTTTGGTAGTCGGCATAATAACGGAAGGATGGCCACATGGAGCTCACGACGGCCTTGGAATTGTTGCCAGTATCTTGTTAGTTGTATTTGTCACGGCGACTAGCGATTATCGACAATCCTTGCAGTTCAAGGACTTGGATAAGGAGAAGAAGAAGATATCCATTCAGGTTACAAGGAGTGGTTATAGACAGAAAATGTCAATCTATGATTTACTTCCTGGAGATATTGTTCACCTCTCTCTTGGTGATCAAGTGCCTGCCGATGGACTATTTGTTTCGGGGTTTTCCGTGTTGATTGATGAGTCGAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGGGTGCAGAAAACCCTTTTCTTCTATCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATGGTTACTACTGTTGGGATGAGAACCCAATGGGGTAAGTTGATGGCCACACTCAGTGAAGGTGGAGATGATGAGACCCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTTTTCTTTGCCGTCATAACTTTCGCGGTGTTGGTTCAAGGATTGGTTAGCCATAAACTTCGAGAAGGAACTCACTGGAGCTGGTCTGGAGATGATGCATTGGCAATATTGGAATTCTTTGCTGTTGCAGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGACTTCCTTTGGCCGTGACATTAAGCCTTGCCTTCGCCATGAAGAAAATGATGAATGATAAAGCACTCGTCCGTCACCTGGCCGCTTGTGAAACGATGGGTTCTGCCACAAGTATTTGCAGTGACAAAACTGGAACAATCACTACAAATCGCATGACAGTCGTCAAATCATGCATTTGCATGAATGTCGAGGATTCGAGTAATAATCAATCAGGCTTCTGCTCTAATCTCTCAGCCTCTGTTGCCAAACTTTTGCTACAATCAATATTCAACAACACTGGGGGAGAAGTTGTAATCAACAAAGATGGCAAGCTTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTACAGTTCGCTCTTTCACTTGGTGGTGATTTTCAGGCTGAGAGACTGGTAGGTAAACTTATTAAAGTTGAACCATTTAACTCTTTGAAAAAGCGGATGGGTGTGGTCCTACAATTTCCTGAAGGTGGTTTTCGAGCTCATACTAAAGGTGCTTCAGAGATAGTATTAGCTGCCTGTGACAAGGTGATCAACTCGAGTGGCGAGGTTGTTCCTTTAGATGAAGATTCCACCAACCAACTCAATGTTATTATCAACCAATTTGCTGGTGAGGCTCTCCGAACACTTTGCCTCGCCTATATGGAACTGGAAAACGGATTCTCTGCGAGCGATTCTATTCCGCTTTCTGGTTACACCTGCATTGGCATTGTTGGTATTAAAGATCCTGTGCGCCCTGGTGTCAAGGAGTCCGTTGCCGTGTGTCGTTCAGCTGGTATTACTGTACGAATGGTTACGGGTGACAATATCAATACTGCTAAAGCTATTGCCAAGGAATGTGGCATCCTCACTGATGATGGCATTGCCATTGAGGGTCCAGATTTCAGAGAGAAAAGTCAAGAGGAATTGCTTAAAATTATCCCCAAAATTCAGGTGATGGCTCGATCTTCACCTCTTGATAAGCACACTCTAGTCAAGCATTTGCGGACCACCTTTGATGAGGTTGTTGCAGTTACTGGTGATGGGACGAACGATGCTCCTGCACTTCACGAAGCAGATATTGGACTCGCAATGGGCATCGCTGGAACTGAGGTTGCCAAAGAGAGTGCTGATGTGATCATTCTTGATGATAATTTCTCTACAATTGTGACTGTGGGAAAATGGGGTCGTTCTGTTTACATAAATATTCAAAAATTTGTGCAATTCCAGCTGACTGTAAACATTGTGGCACTGATCGTGAACTTCACTTCGGCTTGTTTGACAGGTTTAGTATCACAACCACATATAGTGTTTGGTTCACTCATTTTACTAGCTTGTTACTTTTCCTCGGCTAACCTTCTTGTATAA 2388 44.05 MFDGTCHGILGVQPSDYTVPEEVKAAGFQLCADELGSIVEGHDTKKYKFHGGVEGIAQKLCTSTATGLNADADALNRRQELYGINKFAESEQRSFLVFVWEALQDMTLMILGLCAFVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRSGYRQKMSIYDLLPGDIVHLSLGDQVPADGLFVSGFSVLIDESSLTGESEPVMVGAENPFLLSGTKVQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLVSHKLREGTHWSWSGDDALAILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTITTNRMTVVKSCICMNVEDSSNNQSGFCSNLSASVAKLLLQSIFNNTGGEVVINKDGKLELLGTPTETALLQFALSLGGDFQAERLVGKLIKVEPFNSLKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEVVPLDEDSTNQLNVIINQFAGEALRTLCLAYMELENGFSASDSIPLSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIAKECGILTDDGIAIEGPDFREKSQEELLKIIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNIVALIVNFTSACLTGLVSQPHIVFGSLILLACYFSSANLLV 795
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 18280057 18285484 + Sed0019192.6 Sed14g0923 736641
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0923 795 SFLD C1.7: P-type atpase like 368 738 - -
Sed14g0923 795 PANTHER CATION TRANSPORTING ATPASE 33 770 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Sed14g0923 795 Pfam Cation transport ATPase (P-type) 446 524 - -
Sed14g0923 795 NCBIfam HAD-IC family P-type ATPase 652 771 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0923 795 NCBIfam HAD-IC family P-type ATPase 328 412 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0923 795 Gene3D - 101 768 - -
Sed14g0923 795 NCBIfam calcium-translocating P-type ATPase, PMCA-type 44 769 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Sed14g0923 795 Gene3D - 73 269 - -
Sed14g0923 795 Gene3D - 396 590 IPR023299 GO:0000166(InterPro)
Sed14g0923 795 SUPERFAMILY HAD-like 385 762 IPR036412 -
Sed14g0923 795 ProSitePatterns E1-E2 ATPases phosphorylation site. 388 394 IPR018303 -
Sed14g0923 795 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 392 595 IPR023299 GO:0000166(InterPro)
Sed14g0923 795 SUPERFAMILY Calcium ATPase, transduction domain A 172 266 IPR008250 -
Sed14g0923 795 Pfam E1-E2 ATPase 170 365 - -
Sed14g0923 795 Pfam haloacid dehalogenase-like hydrolase 580 700 - -
Sed14g0923 795 FunFam Calcium-transporting ATPase 149 269 - -
Sed14g0923 795 Pfam Cation transporter/ATPase, N-terminus 50 118 IPR004014 -
Sed14g0923 795 SFLD p-type atpase 368 738 IPR044492 -
Sed14g0923 795 PRINTS H+-transporting ATPase (proton pump) signature 686 702 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0923 795 PRINTS H+-transporting ATPase (proton pump) signature 718 743 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0923 795 PRINTS H+-transporting ATPase (proton pump) signature 542 560 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0923 795 PRINTS P-type cation-transporting ATPase superfamily signature 217 231 - -
Sed14g0923 795 PRINTS P-type cation-transporting ATPase superfamily signature 583 594 - -
Sed14g0923 795 PRINTS P-type cation-transporting ATPase superfamily signature 605 615 - -
Sed14g0923 795 PRINTS P-type cation-transporting ATPase superfamily signature 710 722 - -
Sed14g0923 795 PRINTS P-type cation-transporting ATPase superfamily signature 386 400 - -
Sed14g0923 795 PRINTS P-type cation-transporting ATPase superfamily signature 686 705 - -
Sed14g0923 795 FunFam Calcium-transporting ATPase 396 590 - -
Sed14g0923 795 Gene3D - 383 731 IPR023214 -
Sed14g0923 795 FunFam Calcium-transporting ATPase 579 731 - -
Sed14g0923 795 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 770 IPR023298 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0919 Sed-Chr14:18280057 Sed14g0923 Sed-Chr14:18280057 0.00E+00 dispersed
Sed14g0920 Sed-Chr14:18280057 Sed14g0923 Sed-Chr14:18280057 0.00E+00 dispersed
Sed14g0923 Sed-Chr14:18280057 Sed14g1639 Sed-Chr14:24568967 6.10E-28 dispersed
Sed14g0922 Sed-Chr14:18280057 Sed14g0923 Sed-Chr14:18280057 0.00E+00 tandem
Sed14g0923 Sed-Chr14:18280057 Sed14g0924 Sed-Chr14:18280057 0.00E+00 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0923 K01537 - csv:101212315 1380.54