Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0924 ATGGAGAGGTTTTTGGAGAAGAACTTCGGGGGCGTCAAAGCCAAGAACTCCTCCGAGGAGGTGCTGCAGAGATGGAGGGAGCTCTGCGGCGTCGTCAAGAACCCGAAGAGGCGGTTTCGCTTCACGGCCAATCTTTCCAAGCGCATTGAAGCCGCTGCTATGCGCCAGAATAATCAGGAGAAGTTGAGGATTGCAGTTTTAGTCTCAAAAGCTGCATTTCAATTCATCCAAGGTGTGCAACCAAGTGATTATACCGTTCCGGAGGAAGTTAAAGCTGCAGGTTTCCAACTTTGTGCTGATGAACTCGGGTCTATCGTTGAAGGCCACGATACGAAGAAGTACAAATTTCATGGTGGCGTTGAAGGGATTGCTCAAAAGCTATGTACATCTACAGCAACTGGGCTCAATGCTGATGCTGATGCACTCAACCGAAGGCAAGAGCTTTATGGGATTAATAAATTTGCGGAGAGCGAACAACGGAGCTTCTTGGTGTTTGTTTGGGAGGCCCTCCAAGACATGACTCTCATGATCCTTGGACTATGTGCTTTTGTCTCTTTGGTAGTCGGCATAATAACGGAAGGATGGCCACATGGAGCTCACGACGGCCTTGGAATTGTTGCCAGTATCTTGTTAGTTGTATTTGTCACGGCGACTAGCGATTATCGACAATCCTTGCAGTTCAAGGACTTGGATAAGGAGAAGAAGAAGATATCCATTCAGGTTACAAGGAGTGGTTATAGACAGAAAATGTCAATCTATGATTTACTTCCTGGAGATATTGTTCACCTCTCTCTTGGTGATCAAGTGCCTGCCGATGGACTATTTGTTTCGGGGTTTTCCGTGTTGATTGATGAGTCGAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGGGTGCAGAAAACCCTTTTCTTCTATCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATGGTTACTACTGTTGGGATGAGAACCCAATGGGGTAAGTTGATGGCCACACTCAGTGAAGGTGGAGATGATGAGACCCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTTTTCTTTGCCGTCATAACTTTCGCGGTGTTGGTTCAAGGATTGGTTAGCCATAAACTTCGAGAAGGAACTCACTGGAGCTGGTCTGGAGATGATGCATTGGCAATATTGGAATTCTTTGCTGTTGCAGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGACTTCCTTTGGCCGTGACATTAAGCCTTGCCTTCGCCATGAAGAAAATGATGAATGATAAAGCACTCGTCCGTCACCTGGCCGCTTGTGAAACGATGGGTTCTGCCACAAGTATTTGCAGTGACAAAACTGGAACAATCACTACAAATCGCATGACAGTCGTCAAATCATGCATTTGCATGAATGTCGAGGATTCGAGTAATAATCAATCAGGCTTCTGCTCTAATCTCTCAGCCTCTGTTGCCAAACTTTTGCTACAATCAATATTCAACAACACTGGGGGAGAAGTTGTAATCAACAAAGATGGCAAGCTTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTACAGTTCGCTCTTTCACTTGGTGGTGATTTTCAGGCTGAGAGACTGGTAGGTAAACTTATTAAAGTTGAACCATTTAACTCTTTGAAAAAGCGGATGGGTGTGGTCCTACAATTTCCTGAAGGTGGTTTTCGAGCTCATACTAAAGGTGCTTCAGAGATAGTATTAGCTGCCTGTGACAAGGTGATCAACTCGAGTGGCGAGGTTGTTCCTTTAGATGAAGATTCCACCAACCAACTCAATGTTATTATCAACCAATTTGCTGGTGAGGCTCTCCGAACACTTTGCCTCGCCTATATGGAACTGGAAAACGGATTCTCTGCGAGCGATTCTATTCCGCTTTCTGGTTACACCTGCATTGGCATTGTTGGTATTAAAGATCCTGTGCGCCCTGGTGTCAAGGAGTCCGTTGCCGTGTGTCGTTCAGCTGGTATTACTGTACGAATGGTTACGGGTGACAATATCAATACTGCTAAAGCTATTGCCAAGGAATGTGGCATCCTCACTGATGATGGCATTGCCATTGAGGGTCCAGATTTCAGAGAGAAAAGTCAAGAGGAATTGCTTAAAATTATCCCCAAAATTCAGGTGTTTAGTTATTTTCCAAATACCTCTGCGTCATCCAATTTCCCACAGTTAGTTAATCTGATTCACCTTAACGAAACGTCCTGA 2259 45.02 MERFLEKNFGGVKAKNSSEEVLQRWRELCGVVKNPKRRFRFTANLSKRIEAAAMRQNNQEKLRIAVLVSKAAFQFIQGVQPSDYTVPEEVKAAGFQLCADELGSIVEGHDTKKYKFHGGVEGIAQKLCTSTATGLNADADALNRRQELYGINKFAESEQRSFLVFVWEALQDMTLMILGLCAFVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRSGYRQKMSIYDLLPGDIVHLSLGDQVPADGLFVSGFSVLIDESSLTGESEPVMVGAENPFLLSGTKVQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLVSHKLREGTHWSWSGDDALAILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTITTNRMTVVKSCICMNVEDSSNNQSGFCSNLSASVAKLLLQSIFNNTGGEVVINKDGKLELLGTPTETALLQFALSLGGDFQAERLVGKLIKVEPFNSLKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEVVPLDEDSTNQLNVIINQFAGEALRTLCLAYMELENGFSASDSIPLSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIAKECGILTDDGIAIEGPDFREKSQEELLKIIPKIQVFSYFPNTSASSNFPQLVNLIHLNETS 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 18280057 18285484 + Sed0019192.7 Sed14g0924 736642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0924 752 Pfam haloacid dehalogenase-like hydrolase 647 699 - -
Sed14g0924 752 FunFam Calcium-transporting ATPase 17 77 - -
Sed14g0924 752 PRINTS Sodium/potassium-transporting ATPase signature 446 467 - -
Sed14g0924 752 PRINTS Sodium/potassium-transporting ATPase signature 575 593 - -
Sed14g0924 752 PRINTS Sodium/potassium-transporting ATPase signature 203 223 - -
Sed14g0924 752 Pfam E1-E2 ATPase 237 432 - -
Sed14g0924 752 FunFam Calcium-transporting ATPase 463 657 - -
Sed14g0924 752 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Sed14g0924 752 SUPERFAMILY HAD-like 646 732 IPR036412 -
Sed14g0924 752 FunFam copper-transporting ATPase 1 isoform X2 652 697 - -
Sed14g0924 752 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 447 IPR023298 -
Sed14g0924 752 Gene3D - 463 657 IPR023299 GO:0000166(InterPro)
Sed14g0924 752 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Sed14g0924 752 NCBIfam HAD-IC family P-type ATPase 395 479 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g0924 752 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Sed14g0924 752 Gene3D - 168 449 - -
Sed14g0924 752 Pfam Cation transport ATPase (P-type) 513 591 - -
Sed14g0924 752 FunFam Calcium-transporting ATPase 216 336 - -
Sed14g0924 752 Gene3D - 450 728 IPR023214 -
Sed14g0924 752 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516(InterPro)
Sed14g0924 752 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 727 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Sed14g0924 752 Gene3D - 17 77 - -
Sed14g0924 752 PANTHER CATION TRANSPORTING ATPASE 77 728 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Sed14g0924 752 Gene3D - 140 336 - -
Sed14g0924 752 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 662 IPR023299 GO:0000166(InterPro)
Sed14g0924 752 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Sed14g0924 752 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Sed14g0924 752 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Sed14g0924 752 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0921 Sed-Chr14:18280057 Sed14g0924 Sed-Chr14:18280057 0.00E+00 dispersed
Sed14g0922 Sed-Chr14:18280057 Sed14g0924 Sed-Chr14:18280057 0.00E+00 dispersed
Sed14g0923 Sed-Chr14:18280057 Sed14g0924 Sed-Chr14:18280057 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0924 K01537 - csv:101212315 1308.12