Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0970 ATGAGATTTCTTGTAATTATTATTCATCTTCTGCAATTTCTGCAATTTCTGCAACTTCACTTTTCCCCTTCCTTTTCTGCACTCATTACTGAATCCCAAGCTCTTCTCTCCTTCAAATCCTCCATTTCCGATGACCCCAAATCCTCCCTCTCCGCCTGGACCGCCGCCGCCGCCCACTGCTCTTGGCCCGGCGTCACCTGCGACGCCCGCCGCCGCGTCGTCGGCCTCCACCTCTCCTCCCTCGACCTCGTCGGCACCATTTCCCCCGACCTCGCTTCCCTTCCATTTCTCACCAACGTTTCCCTCGACCTCAACAACTTCTCCGGCGAAATCCCGCCGGAGCTCGCCTCGATTTCTTCTCTCCGGCATCTCAACCTCTCTAGCAACGTCCTTAACGGGTCGATACCTCGCGGGTTTTCGCAGCTGAAGAATCTACTTGTTCTTGATGTTTATAACAACAACTTGACCGGCGACTTCCCCGGAGTTGTCGCTGAAATACCCAACCTCCGTTATTTGCACCTTGGGGGAAATTTCTTCGCCGGTCGGATCCCTTTAGAGATCGGGAACTTGCAGTTCTTGGAGTTTTTGGCGATTCACGGCAATGATTTTCGAGGGCCGATTCCGGCGACGATCGGAAACTTGACGAAGCTTCGAGAACTCTTCATTGGTTACTACAATACCTTCATCGGTGGGTTACCGGCGGAAATCGGAAACTTATCGGAGTTAGTTTTGTTAGACGCTGCGAGTTGTGGGTTGACCGGAAACTTCCCGCCGGAGATCGGAAAGTTGCAGAAACTCGAGAAACTTTTCCTCCAAGAAAATGCTCTGTCCGGGCCATTAACAGAGCTTGGAGGATTAAAAAGCATAGAATCGTTGGATATTTCATGCAATAAGCTTATCGGTGAAATACCCATTTCATTTTCAGAGTTCAAAAACTTGATACTACTTCATCTTTTCGACAACAAGCTCACCGGAGAGATTCCGGGGTTCATCGGCGACCTCCCAAAGCTTGAGGTATTGCAGCTATGGAACAACAATTTCACAGGTTCGATTCCTCCGAATTTGGGCAAGAACCAAAGGCTTCTGATTCTCGATCTTGCTTTCAACCAGTTAACAGGTCCAATTCCTTACGAAATTTGCCATGGAAATCAGCTTAGAGTTTTGATCATTATGGACAATTTCTTGTCCGGTTCGATCCCAGAATCGTTAGGAAATTGTATCTCACTTAGCCGTATACTTTTATGGGGCAATGCTCTGAATGGAACAATTCCAAATGGGCTTTTGGGTTTGCCAAATCTCACTCAGCTTGATTTGCATAACAATTTTCTCTCTGGAGAACTTCCCATTAACGATTCTGTTTCAGTTAATCTTATCGAAGTTAGTTTATCGAACAATATGCTCTCTGGATCCTTGCCGCCCACCATCGGCAACCTTTTGGCTGTTCAGAAGCTTCTTATCGATAGGAATAAGTTTTCAGGTGCGATTCCTTCAAAGATTGGGAGATTACAGCAGCTATCTCGGATAAACTTCAGCCAGAACAAATTCTCTGGTAGAATTGCACCAGAGATAAGTGAATGCAAGCACTTGATCTTTCTTGATCTTAGTGGAAATGAGCTTTCTGGTGAAATTCCTAAGAATATTACACATATGAAGTTATTGACTTATATGAATCTTTCAAGAAACCATTTAGTTGGGTCTATTCCTGCTTCAATAGTTAATATGCAGAGCTTAACATCTGTAGACTTTTCATATAACAATCTCTCTGGTTTGGTTTTGGGAACTGGGCAATTTGGTTACTTCAATTACACATCATTTCTAGGCAACCCTTATCTCTGTGGAGCATATTTGGGGCCTTGCAAAGATGGGGTCCAACAAGAACATATGAAAAGCTCCCTTTCAACTCCTCTCAGGCTCCTGCTTGTTTTTGGATCTTTTTTTTGTTTAGTTGCTTTGACTGTTGCATTGATCTTCAAAGTTAGGTCATTGAAGAGAGCAAAGGAGTTTCAAGGATGGAGATTAACGGCCTTCCAACGCTTGGGTTTCTCGGTCGATGAGGTTGTGGATTGCCTTAAGATGGATAATGTTAATGCAAGAGGCTATGGCACGGTATATGAAGGAGTGATGCCAAGTGGTGATCAGGTTACTGTGAAAAGGCTTCCAAAGATGAGCAATGGCTGTTCTAATGATAACGGATTCGATGCCGAGATACAAGCTCTAGGGAGGATTCGACACCGTCACGTCGTTAGATTATTGGGGTTCTGTTCAAACCATGATACTAATCTTTTGGTATATGAGTTCATGCCTAATGGGAACCTATATGATGTTCTCCACGGCAAGAAAGGAGGTCACTTGCTCTGGGATACCAGGTACAAGATAGCCATTGGAACTGCAAATGGACTTTGCTATCTTCACCACCATTGTTCGCCACCAATTGTTCATCGAGATGTAAAATCGAACAATATTATGCTTGACACCAACTTTGACGCTCAGCTTGCCAATTCCGGGATCGCGAAGTTCTTACAAGATTCAGGCACGGTGGATAAATCAGCTCTTGCACCAGCGCATGTCTATGCACAGAATGGCGACGAGAAATGGGATGTTTATAGCTTTGGAATCGTCCTCTTGGAACTTATTAGCGGTAGGAATCCAATCGGAGAGCTAAACGACACAGTGGACATAGTTCAATGGGCTAGAAAAATGACCGACTCAGAAGAGGAGGGAGTACATAAAATCGTCGATCAAAGGCTCTCCTCCATCCCCCTCGACGAGGTGATGCACGTACTCAATGTCGCCATGCTCTGTACTGAAGTAGAGGCAGCAAGGCGGCCCATGATGCGGGAGGTCGTGCGGATCTTAACGGAGCAACAACCGATCTCAAACGGGGAAAGAGATGCATAA 2898 45.45 MRFLVIIIHLLQFLQFLQLHFSPSFSALITESQALLSFKSSISDDPKSSLSAWTAAAAHCSWPGVTCDARRRVVGLHLSSLDLVGTISPDLASLPFLTNVSLDLNNFSGEIPPELASISSLRHLNLSSNVLNGSIPRGFSQLKNLLVLDVYNNNLTGDFPGVVAEIPNLRYLHLGGNFFAGRIPLEIGNLQFLEFLAIHGNDFRGPIPATIGNLTKLRELFIGYYNTFIGGLPAEIGNLSELVLLDAASCGLTGNFPPEIGKLQKLEKLFLQENALSGPLTELGGLKSIESLDISCNKLIGEIPISFSEFKNLILLHLFDNKLTGEIPGFIGDLPKLEVLQLWNNNFTGSIPPNLGKNQRLLILDLAFNQLTGPIPYEICHGNQLRVLIIMDNFLSGSIPESLGNCISLSRILLWGNALNGTIPNGLLGLPNLTQLDLHNNFLSGELPINDSVSVNLIEVSLSNNMLSGSLPPTIGNLLAVQKLLIDRNKFSGAIPSKIGRLQQLSRINFSQNKFSGRIAPEISECKHLIFLDLSGNELSGEIPKNITHMKLLTYMNLSRNHLVGSIPASIVNMQSLTSVDFSYNNLSGLVLGTGQFGYFNYTSFLGNPYLCGAYLGPCKDGVQQEHMKSSLSTPLRLLLVFGSFFCLVALTVALIFKVRSLKRAKEFQGWRLTAFQRLGFSVDEVVDCLKMDNVNARGYGTVYEGVMPSGDQVTVKRLPKMSNGCSNDNGFDAEIQALGRIRHRHVVRLLGFCSNHDTNLLVYEFMPNGNLYDVLHGKKGGHLLWDTRYKIAIGTANGLCYLHHHCSPPIVHRDVKSNNIMLDTNFDAQLANSGIAKFLQDSGTVDKSALAPAHVYAQNGDEKWDVYSFGIVLLELISGRNPIGELNDTVDIVQWARKMTDSEEEGVHKIVDQRLSSIPLDEVMHVLNVAMLCTEVEAARRPMMREVVRILTEQQPISNGERDA 965
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 18916856 18920389 - Sed0014573.1 Sed14g0970 736688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0970 965 Gene3D Ribonuclease Inhibitor 182 281 IPR032675 -
Sed14g0970 965 Gene3D Ribonuclease Inhibitor 282 375 IPR032675 -
Sed14g0970 965 Gene3D Ribonuclease Inhibitor 376 628 IPR032675 -
Sed14g0970 965 ProSiteProfiles Protein kinase domain profile. 689 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0970 965 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 659 766 - -
Sed14g0970 965 SMART LRR_typ_2 430 454 IPR003591 -
Sed14g0970 965 SMART LRR_typ_2 574 597 IPR003591 -
Sed14g0970 965 SMART LRR_typ_2 118 142 IPR003591 -
Sed14g0970 965 SMART LRR_typ_2 334 358 IPR003591 -
Sed14g0970 965 SMART LRR_typ_2 263 286 IPR003591 -
Sed14g0970 965 SMART LRR_typ_2 166 190 IPR003591 -
Sed14g0970 965 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 185 280 - -
Sed14g0970 965 Gene3D Ribonuclease Inhibitor 28 181 IPR032675 -
Sed14g0970 965 Pfam Leucine Rich repeats (2 copies) 311 352 IPR025875 -
Sed14g0970 965 Gene3D Transferase(Phosphotransferase) domain 1 768 963 - -
Sed14g0970 965 FunFam Leucine-rich repeat receptor-like protein kinase 29 184 - -
Sed14g0970 965 SUPERFAMILY Protein kinase-like (PK-like) 699 952 IPR011009 -
Sed14g0970 965 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 338 623 - -
Sed14g0970 965 Gene3D Phosphorylase Kinase; domain 1 696 767 - -
Sed14g0970 965 Pfam Protein tyrosine and serine/threonine kinase 699 952 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0970 965 SMART serkin_6 690 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0970 965 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Sed14g0970 965 Pfam Leucine Rich Repeat 361 381 IPR001611 GO:0005515(InterPro)
Sed14g0970 965 Pfam Leucine Rich Repeat 384 406 IPR001611 GO:0005515(InterPro)
Sed14g0970 965 Pfam Leucine Rich Repeat 528 550 IPR001611 GO:0005515(InterPro)
Sed14g0970 965 Pfam Leucine Rich Repeat 553 574 IPR001611 GO:0005515(InterPro)
Sed14g0970 965 Pfam Leucine Rich Repeat 288 309 IPR001611 GO:0005515(InterPro)
Sed14g0970 965 Pfam Leucine Rich Repeat 456 478 IPR001611 GO:0005515(InterPro)
Sed14g0970 965 Pfam Leucine rich repeat 120 177 IPR001611 GO:0005515(InterPro)
Sed14g0970 965 SUPERFAMILY L domain-like 54 374 - -
Sed14g0970 965 SUPERFAMILY L domain-like 303 624 - -
Sed14g0970 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0970 965 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 954 IPR050647 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0774 Sed-Chr10:5450339 Sed14g0970 Sed-Chr14:18916856 1.20E-16 dispersed
Sed14g0970 Sed-Chr14:18916856 Sed14g1705 Sed-Chr14:24919738 7.20E-92 dispersed
Sed14g0970 Sed-Chr14:18916856 Sed14g0971 Sed-Chr14:18940819 8.70E-21 tandem
Sed10g0773 Sed-Chr10:5438806 Sed14g0970 Sed-Chr14:18916856 5.40E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80174 PF07714 PK_Tyr_Ser-Thr 1.20E-32 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0970 - - - 0.0