Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0971 ATGCGTCTTCCTCTACTTCTTCTTCTCCTCTGCTTTCTGCAACTTCACATTCACCACTCTGTTTCTGCTCGTGTTTCTGAGTACAGAGCTCTTCTCTCCCTCAAAACCTCCATTTCCGGCGACCCCAAATCCTCCCTCTCTTCCTGGAACGCCTCCACCAGCCACTGTTCTTGGTTCGGTGTCACCTGCGATGTCCACCGCCACGTCACGGCCCTTGACCTCTCCGGTCTCGGCCTCTCCGGTTCTCTCTCCCCGGATATTGCCGTTTTGAGGTTTCTTAGTAATCTTTCTCTGGCTTCCAATGAGTTTTCCGGTCCGATCCCGCCGGAGATTTCTGCCATATCTACACTCCGGCTGCTTAATTTGTCGAACAATGTGTTTGATGGGTCGTTTCCTTTGCGGATTTCTCAGCTTCAGAATCTGCAGATTCTTGACTTGTATAACAACAATCTGACAGGGGATTTCCCCATTGTGGTTACCGAGATGACGAACCTTCGCCATTTGCATATGGGTGGGAATTTCTTCGCCGGGAAAATCCCGCCGGAGGTTGGGAAGATGGAGTCCTTGGAGTATTTGGCGGTTTCCGGCAACGAACTTGGCGGTCCGATTCCGCCGGAGATTGGGAACTTGACGAATCTTCGTGAGCTTTACATTGGGTATTTCAACGCGTATTCCGGCGGTATTCCGCCGGAGATTGGGAATCTGTCGGCGTTGGTGCGGTTTGACGCAGCGAACTGTGGTCTGACTGGCCGGATTCCGCCGGAGATCGGAAAGTTGCAGAATCTCGACACTCTGTTTCTTCAAGTGAATGCTCTGTCTGGGCCATTAACGCCGGAGATTGGTGGGTTGAAGAGCTTGAAATCGTTGGATTTGTCGAACAATATGCTTGTGGGTGAGATTCCAGATTCTTTCGCCGAGTTAAAGAACTTAACGCTGTTGAATCTGTTTCGGAACCGGCTTCACGGATCGATTCCTTCATTCATCGGCGACTTGCCGGAGCTGGAGGTGTTGCAGTTATGGGAGAACAATTTCACGGAATCGATCCCACAAAACTTGGGCAAGAACGGATTGCTTCAGATTTTGGATCTTTCTTCGAACAAGCTCACCGGAACTCTGCCTCCCGATATGTGCTACGGTAATCGCCTTCAAACTCTCATCACATTGAGCAATTTCCTGTTTGGTCCAATCCCAGAATCATTAGGCAAATGTGTTTCTCTTAATCGAATTCGAATGGGGGAAAATTTTCTCAATGGATCCATTCCTAAGGGGCTTTTGAATCTGCCGGAGCTTTCTCAGGTTGAGTTACAGGACAATTACCTCTCCGGCGAGTTCCCTGTTACGGATTCGATCTCGGTGAATCTCGGCCAGATTAGTCTCTCGAATAATCGGTTATCTGGGTCCATTCCGCCATCAATCGGGAACTTCTCTGGCGTCCAGAAACTACTTCTTGATGGAAACAAATTCTCTGGCCGAATCCCACCTGAGATTGGGCGGTTACAGCAACTTTCTAAGATTGATTTCAGTAACAATAAGTTGTCGGGTTCGATCGCACCGGAGATTAGCCAATGCAAGGTTCTAACCTTCGTCGATCTCAGCCGAAACGAGCTCGATGGCGAAATTCCAAACGAGATTACCAGTATGAGGATATTGAATTACTTGAATCTCTCAAAAAACCACTTAATTGGTGGAATTCCAGCTTCCATAGCCAGTATGCAGAGTTTAACCTCTGTTGATTTCTCATACAACAACCTTTCTGGTTTAGTTCCAGGAAGTGGGCAATTTAGTTACTTCAATTACACATCATTTTTGGGCAATCCCAATCTTTGTGGCCCATATTTAGAGCCATGCAAAGATGGGGTTGCCAATAGAGCCATAAAAGGTCCTTTATCTGCTACCCTTAAGCTCCTCCTTGTAATTGGTCTGCTTCTTTGCTCAATTGCATTTGCAGTTGCAGCCATCATCAAAGCTCGATCGATAAAGAGAGCCAGTGACTCTCGAGCTTGGAAACTAACATCCTTCCAACGTCTCGATTTCACAGTTGATGGTGTTCTTGATTGCTTAAAAGAGGATAACATCATAGGGAAAGGAGGTGCTGGAATTGTCTATAAAGGGGCCATGCCAAATGGCGAACAGGTCGCTGTCAAAAGGCTGCCGGTTATGAGTCGAGGCTCGTCACATGACCATGGATTCAATGCGGAGATACAAACTCTTGGGAGGATTCGACATAGACACATTGTTAGACTATTGGGATTTTGTTCAAACCATGAGACTAATCTTTTGATTTATGAGTATATGCCTAATGGGAGCTTGGGGGAAGTTCTTCATGGCAAAAAGGGAGGTCACTTGCAGTGGGATACAAGGTATAAGATTGCCATTGAAGCTGCTAAAGGGCTTTGCTATCTTCACCATGATTGCTCACCGCTCATTGTTCATCGAGATGTGAAATCAAACAACATACTTCTTGACACTAATTTTGAAGCTCATGTTGCTGATTTTGGCCTCGCCAAGTTCTTGCAGGATTCTGGCACTTCTGAGTGTATGTCTGCCATTGCTGGTTCTTATGGATATATTGCCCCAGAATATGCCTACACACTCAAAGTTGACGAGAAGAGTGACGTATATAGTTTTGGAGTTGTCCTCCTAGAGCTTGTTAGCGGGAAAAAACCAGTTGGAGAATTCGGGGACGGTGTCGACATAGTCCAATGGGTTAGAAAACTGACGGGCTCGAACAAGGAAGAGGTAGTGAAAATCCTCGATCCAAGGCTCTCCTCCGTCCCTCTCCACGAAGTGATGCACGTCTTCTACGTCGCAATGCTGTGTGTCGAGGAACAGGCAGTGGAGCGTCCGACAATGCGGGAAGTGATCCAAATCCTATCAGAGGTTCCACAGCCACCATTTTCAAAACAGGGAGACCAAACACTCCCCAACTCCTCACCGCTGCCGCTTCCGCCACCCGCCGCCGCATTGGACCCTCCAACAACAGGAACCAAGAGCCAAAAGGACCTGCAGCAGACACCACCGGATCTTCTCAGCATTTGA 3039 47.65 MRLPLLLLLLCFLQLHIHHSVSARVSEYRALLSLKTSISGDPKSSLSSWNASTSHCSWFGVTCDVHRHVTALDLSGLGLSGSLSPDIAVLRFLSNLSLASNEFSGPIPPEISAISTLRLLNLSNNVFDGSFPLRISQLQNLQILDLYNNNLTGDFPIVVTEMTNLRHLHMGGNFFAGKIPPEVGKMESLEYLAVSGNELGGPIPPEIGNLTNLRELYIGYFNAYSGGIPPEIGNLSALVRFDAANCGLTGRIPPEIGKLQNLDTLFLQVNALSGPLTPEIGGLKSLKSLDLSNNMLVGEIPDSFAELKNLTLLNLFRNRLHGSIPSFIGDLPELEVLQLWENNFTESIPQNLGKNGLLQILDLSSNKLTGTLPPDMCYGNRLQTLITLSNFLFGPIPESLGKCVSLNRIRMGENFLNGSIPKGLLNLPELSQVELQDNYLSGEFPVTDSISVNLGQISLSNNRLSGSIPPSIGNFSGVQKLLLDGNKFSGRIPPEIGRLQQLSKIDFSNNKLSGSIAPEISQCKVLTFVDLSRNELDGEIPNEITSMRILNYLNLSKNHLIGGIPASIASMQSLTSVDFSYNNLSGLVPGSGQFSYFNYTSFLGNPNLCGPYLEPCKDGVANRAIKGPLSATLKLLLVIGLLLCSIAFAVAAIIKARSIKRASDSRAWKLTSFQRLDFTVDGVLDCLKEDNIIGKGGAGIVYKGAMPNGEQVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLIYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDTNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGKKPVGEFGDGVDIVQWVRKLTGSNKEEVVKILDPRLSSVPLHEVMHVFYVAMLCVEEQAVERPTMREVIQILSEVPQPPFSKQGDQTLPNSSPLPLPPPAAALDPPTTGTKSQKDLQQTPPDLLSI 1012
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 18940819 18945270 - Sed0002656.1 Sed14g0971 736689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0971 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 335 620 - -
Sed14g0971 1012 ProSiteProfiles Protein kinase domain profile. 687 966 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0971 1012 MobiDBLite consensus disorder prediction 992 1012 - -
Sed14g0971 1012 Gene3D Ribonuclease Inhibitor 344 620 IPR032675 -
Sed14g0971 1012 Pfam Protein kinase domain 689 956 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0971 1012 Gene3D Ribonuclease Inhibitor 222 343 IPR032675 -
Sed14g0971 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 974 - -
Sed14g0971 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 764 - -
Sed14g0971 1012 Gene3D Ribonuclease Inhibitor 137 221 IPR032675 -
Sed14g0971 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0971 1012 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Sed14g0971 1012 Gene3D Ribonuclease Inhibitor 26 136 IPR032675 -
Sed14g0971 1012 SMART LRR_typ_2 356 379 IPR003591 -
Sed14g0971 1012 SMART LRR_typ_2 186 210 IPR003591 -
Sed14g0971 1012 SMART LRR_typ_2 499 523 IPR003591 -
Sed14g0971 1012 SMART LRR_typ_2 331 355 IPR003591 -
Sed14g0971 1012 SMART LRR_typ_2 571 594 IPR003591 -
Sed14g0971 1012 SMART LRR_typ_2 138 162 IPR003591 -
Sed14g0971 1012 SMART LRR_typ_2 283 306 IPR003591 -
Sed14g0971 1012 SMART serkin_6 687 935 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0971 1012 MobiDBLite consensus disorder prediction 962 1012 - -
Sed14g0971 1012 Gene3D Phosphorylase Kinase; domain 1 659 764 - -
Sed14g0971 1012 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 961 IPR050647 -
Sed14g0971 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 84 327 - -
Sed14g0971 1012 Pfam Leucine Rich Repeat 479 499 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 140 157 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 164 186 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 526 547 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 309 331 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 285 307 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 453 475 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 358 377 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 502 523 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 Pfam Leucine Rich Repeat 550 571 IPR001611 GO:0005515(InterPro)
Sed14g0971 1012 SUPERFAMILY L domain-like 358 616 - -
Sed14g0971 1012 MobiDBLite consensus disorder prediction 962 976 - -
Sed14g0971 1012 Gene3D Transferase(Phosphotransferase) domain 1 765 972 - -
Sed14g0971 1012 SUPERFAMILY Protein kinase-like (PK-like) 683 958 IPR011009 -
Sed14g0971 1012 SUPERFAMILY RNI-like 72 414 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1135 Sed-Chr7:8501633 Sed14g0971 Sed-Chr14:18940819 2.90E-86 dispersed
Sed07g1794 Sed-Chr7:19908111 Sed14g0971 Sed-Chr14:18940819 2.20E-22 dispersed
Sed10g0773 Sed-Chr10:5438806 Sed14g0971 Sed-Chr14:18940819 7.30E-11 dispersed
Sed10g0775 Sed-Chr10:5481805 Sed14g0971 Sed-Chr14:18940819 7.70E-26 dispersed
Sed12g0417 Sed-Chr12:2518339 Sed14g0971 Sed-Chr14:18940819 1.10E-75 dispersed
Sed12g1816 Sed-Chr12:29364425 Sed14g0971 Sed-Chr14:18940819 4.90E-59 dispersed
Sed12g2458 Sed-Chr12:34202758 Sed14g0971 Sed-Chr14:18940819 2.10E-74 dispersed
Sed13g1133 Sed-Chr13:10680182 Sed14g0971 Sed-Chr14:18940819 3.90E-141 dispersed
Sed14g0971 Sed-Chr14:18940819 Sed14g1705 Sed-Chr14:24919738 8.00E-134 dispersed
Sed14g0970 Sed-Chr14:18916856 Sed14g0971 Sed-Chr14:18940819 8.70E-21 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80175 PF07714 PK_Tyr_Ser-Thr 1.70E-46 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0971 - - - 0.0