Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0996 | ATGGCTGATAGTTTATACTGTACAGAGAGCTCCAATACTTGTTTTGATTGTATTGCCACAAACAATGAGCTAATATCTCGGCCCCGCCGTAGAGCCCGAGACCCGAATGTTGACGGTTTCGGAGCCGAGAGTGAAGAGAGGATCAGAGAAATGGTTGAGAAAGAGATTCAGCATTTGCCTAGACATGATTATCTTAATAGAATGAGATGTGGGGATTTGGATTTGAAGTTTAGAAGAGAGGCTGTTGATTGGATTTGGAAGGCTCATGCTCATTACACCTTTGGACCTTTGAGTCTTTGTCTGTCATTGAACTATTTGGATCGTTTCCTCTCAGCATATCACATGCCTATGGATAAAAGCTGGATTGTGCAGCTGCTGTCAGTAGCTTGTATGTCTCTAGCAGCAAAAATGGAGGAAGCAGAAATGCCTCTTCCCATAGATTTACAGGTTGAGGAACCTAAGTTTGTGTTTGAAGCAAAAACAATACAAAGAATGGAGCTTTTGGTTCTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCATTCATTGATTATTTTCTTAGTAAGATCACTGTTGAGCAGCATGTACCAAGGCCATCCTTGTTAAAATCTGGACAACTCATTCTGAACACAATTAAAGGCATTGACTTCTTGGAATTCAAGCCCTCTGAAATTGCTTTGGCTGTGGCAATTTCCATTTCAGAAGAACTTCAAGCAACAGACATGAATAAAGAAATCCTTTCTTTTCCATACATTGAGAAAGAGAGAGTGACAAAGTGTATTGAACTGATCAAGGATTTTTCATTGATCAATAATGCATATGAAAATTCATTGGGTGGTGGTAATAATGGTGGTTCTTCAATTCCTCAAAGCCCTGTTGGAGTGTTGGATGCAGCTTGTTTCAGTTACAAAACAGAAGAATTTACTGCAGCTTCATGTGGTAATAATTCTTCTTATCATGACAGTCCAGACAGCAAGAGAAGGAGACAAAACAGACCATCATCAAATCATGATTCAAGTCCTGAAAAAGAGTGA | 1044 | 39.46 | MADSLYCTESSNTCFDCIATNNELISRPRRRARDPNVDGFGAESEERIREMVEKEIQHLPRHDYLNRMRCGDLDLKFRREAVDWIWKAHAHYTFGPLSLCLSLNYLDRFLSAYHMPMDKSWIVQLLSVACMSLAAKMEEAEMPLPIDLQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVEQHVPRPSLLKSGQLILNTIKGIDFLEFKPSEIALAVAISISEELQATDMNKEILSFPYIEKERVTKCIELIKDFSLINNAYENSLGGGNNGGSSIPQSPVGVLDAACFSYKTEEFTAASCGNNSSYHDSPDSKRRRQNRPSSNHDSSPEKE | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 19366486 | 19369357 | - | Sed0026894.1 | Sed14g0996 | 736714 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0996 | 347 | CDD | CYCLIN_AtCycD-like_rpt1 | 78 | 175 | - | - | |
Sed14g0996 | 347 | Pfam | Cyclin, N-terminal domain | 48 | 177 | IPR006671 | - | |
Sed14g0996 | 347 | MobiDBLite | consensus disorder prediction | 324 | 347 | - | - | |
Sed14g0996 | 347 | ProSitePatterns | Cyclins signature. | 78 | 109 | IPR048258 | - | |
Sed14g0996 | 347 | MobiDBLite | consensus disorder prediction | 315 | 347 | - | - | |
Sed14g0996 | 347 | Gene3D | - | 61 | 178 | - | - | |
Sed14g0996 | 347 | FunFam | D2/4-type cyclin | 61 | 173 | - | - | |
Sed14g0996 | 347 | CDD | CYCLIN_AtCycD-like_rpt2 | 180 | 267 | - | - | |
Sed14g0996 | 347 | SUPERFAMILY | Cyclin-like | 42 | 177 | IPR036915 | - | |
Sed14g0996 | 347 | Gene3D | - | 49 | 266 | - | - | |
Sed14g0996 | 347 | FunFam | D6-type cyclin | 174 | 265 | - | - | |
Sed14g0996 | 347 | Pfam | Cyclin, C-terminal domain | 180 | 274 | IPR004367 | - | |
Sed14g0996 | 347 | PANTHER | CYCLINS | 42 | 269 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Sed14g0996 | 347 | SMART | cyclin_7 | 83 | 171 | IPR013763 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed13g0425 | Sed-Chr13:2798669 | Sed14g0996 | Sed-Chr14:19366486 | 8.50E-45 | dispersed | |
Sed13g1781 | Sed-Chr13:22857081 | Sed14g0996 | Sed-Chr14:19366486 | 1.00E-36 | dispersed | |
Sed14g0876 | Sed-Chr14:17592829 | Sed14g0996 | Sed-Chr14:19366486 | 2.40E-34 | dispersed | |
Sed10g0826 | Sed-Chr10:6040568 | Sed14g0996 | Sed-Chr14:19366486 | 1.60E-142 | wgd | |
Sed14g0996 | Sed-Chr14:19366486 | Sed04g0187 | Sed-Chr4:1317654 | 2.50E-79 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0996 | K18810 | - | csv:101209378 | 515.768 |