Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1015 ATGTACTTAAGTTTGAAGTGTTGTTCTTGTTGTTGTAACAAAACTTGCAGCCATGAAATCGTTGGCGAAGTAACAAAGGTTGGAAGCAAAGTAGAGAAATTCAAGGTTGGAGACAAAGTTGGCGTAGGTTGTATGGTCGGATCCTGTCGCTCCTGCGATAACTGTTCCAACGACCTTGAGAACTACTGCCCCAAAATGATTCTCACTTACTCTTCCAAATTTTTCGATGGGAGCGTAACCTACGGTGGCTACTCCGACTCCATGGTTGCTGACGAGCATTTCATCGTTCGCATTCCCGACGGCAGCCCTCTGCATGCTGTGGCTCCACTGCTGTGCGCCGGCGTCACGGTCTATAGCCCCTTGAGGTATTATGGACTTGACAAGCCTGGTATGCATATTGGTGTGGTTGGCCTTGGTGGGCTTGGTCATGTTGCTGTCAAATTTGCCAAGGCCTTTGGTGCTAAGGTTACTGTGATTAGTACATCCCCTAATAAGAAGGACGAGGCTATTACTAATCTTGGGGCTGATTCATTCTTGGTCAGCCGCGATCAAGACCAAATGCAGGCTGCTTGGGGGACGATGGATGGTATCATTGACACAGTCTCAGCTCTGCATCCCCTGCTTCCTTTGATATCTCTTATCAAACCACATGGAAAGCTTGTTATGCTTGGTATACCAGAGAAGCCACTAGAGGTCCCAGCCTTTGCTCTCATTGGGGGTAGGAAAACAGTGGCTGGTAGCTGCATTGGAGGGATGAAGGAAACACAGGAGATGATTGATTTTGCAGCCAAACACAATATAACTGCAGAAGTGGAGCTTATTCCGGTCACCGACGTCAACACCGCCATGGAACGGATGCTGAAACAAGATGTCAAGTATCGATTCGTTATCGACATTGCGAACACCTTGAAGCCTGACAACTAA 924 47.73 MYLSLKCCSCCCNKTCSHEIVGEVTKVGSKVEKFKVGDKVGVGCMVGSCRSCDNCSNDLENYCPKMILTYSSKFFDGSVTYGGYSDSMVADEHFIVRIPDGSPLHAVAPLLCAGVTVYSPLRYYGLDKPGMHIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKDEAITNLGADSFLVSRDQDQMQAAWGTMDGIIDTVSALHPLLPLISLIKPHGKLVMLGIPEKPLEVPAFALIGGRKTVAGSCIGGMKETQEMIDFAAKHNITAEVELIPVTDVNTAMERMLKQDVKYRFVIDIANTLKPDN 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 19661056 19663779 + Sed0021229.2 Sed14g1015 736733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1015 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 104 267 IPR036291 -
Sed14g1015 307 Pfam Zinc-binding dehydrogenase 140 263 IPR013149 -
Sed14g1015 307 FunFam Cinnamyl alcohol dehydrogenase 113 269 - -
Sed14g1015 307 PANTHER ALDEHYDE REDUCTASE 16 302 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Sed14g1015 307 Gene3D - 113 269 - -
Sed14g1015 307 Gene3D - 16 299 - -
Sed14g1015 307 Pfam Alcohol dehydrogenase GroES-like domain 15 100 IPR013154 -
Sed14g1015 307 SUPERFAMILY GroES-like 16 130 IPR011032 -
Sed14g1015 307 CDD CAD1 18 298 IPR047109 GO:0016616(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0805 Sed-Chr10:5827449 Sed14g1015 Sed-Chr14:19661056 1.80E-149 dispersed
Sed14g1014 Sed-Chr14:19661056 Sed14g1015 Sed-Chr14:19661056 1.70E-167 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1015 K23232 - csv:101222715 506.523