Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed14g1163 | ATGGAATGGGGTTTTTTGGGATTTTGGATTTTGAGCTCTTTTGTGATTTTGGGTTTGCTTTGGTTGAAGAAGAAAATAAATACTCAAAATTACAATCATGGAATTCCAAAAGGGAACCTGGGTTTTCCTCTCCTTGGTGAAACGCTCCAATTCATTGCTTCTGGATACTCTTCTCGACCTGTCACCTTCATGAACAAACGCAAATCTCTGTATGGAAATGTGTTCAAAACCAACATTTTGGGGACACCAATAATAGTGTCCACTGATTCAGAGGTGAATAAGGTGGTTTTACAGAACCATGGCAACATTTTTACCCCAGCTTACCCCAAATCAATTACTGAATTACTTGGTTCATTTTCAATTCTTCAAATGAATGGAAATGTTCAAAAAAGAGTTCATACAATCATTGGAGCTTTTCTTAGGTCTCCAAATCTCAAATCTAGAATCACTAGAGACATTCAAAACACTGTTAAATTAAGGCTTGCCAATTGGAACACCTCCCAATTGGTTTATGTCCAAACTGAAACCAAACAGATCACATTTGAAGTGTTGGTGAAGATGTTGATGAGTGTGGGACCCGGTGAGGATTTAAAGACTTTGAAAAGGGAATTTGAAGAGTTTATCAAAGGATTGATTTGTATACCTGTTAAACTACCTGGAACTAGGCTTTATAAATCTTTGAAGGCGAGAGAAAACCTGTTGAAAATAGTGAGCAAAATCGTGAGAGAGAGGAGGGAATCAACGGCGGAGGAGAGGGTTGCAGCGAGAGATGCAGTGGACGTGCTCTTACAGGATCACGATGAAGTTGAAGGGCTGCCGTTGGATTTCATCAGCAGCCACGTCATCGAGCTGATGATCCCCGGCGAGGAGACGGTGCCGATGGCGATGACGCTCGCCGTTAAATTTCTCAGTGACAGCCCTCTCGCTCTCGCCCAATTGACGGAAGAGAATATGAAACTGAAGAAGCAGAAAGATGATTCTGGCCTGGAGTATACGTGGACAGATTACATGTCTCTGCTTTTCACCCAAAATGTGATTAGTGAAACGTTAAGAATGGCTAATATCATCAATGGGGTTTGGAGAAAAGCTCAAAAAGATGTCCAAATCAAAGGATATTTAATACCGAAAGGATGGTGCGTTCTGGCATCGTTTATTTCGGTTCATATGGATGAAAATAACTATGCAAATCCACATCAGTTTGATCCATGGAGATGGGAGCAGGAAACTGGTTCTACTAACAGCCATAACTTTACACCTTTTGGAGGGGGACAGAGGCTATGTCCCGGCATCGAACTCGCCAGGCTCGAAATCTCAATTTTCCTTCATCATTTCGTCACGACATACAAATGGGGAGCTGAAAAGGATGAAGTTATCCATTTTCCGACAGTGAGGATGAGAAGGAAGCTTCCAATCGCAATCGCGACGTTAAGCTCTTGA | 1437 | 41.89 | MEWGFLGFWILSSFVILGLLWLKKKINTQNYNHGIPKGNLGFPLLGETLQFIASGYSSRPVTFMNKRKSLYGNVFKTNILGTPIIVSTDSEVNKVVLQNHGNIFTPAYPKSITELLGSFSILQMNGNVQKRVHTIIGAFLRSPNLKSRITRDIQNTVKLRLANWNTSQLVYVQTETKQITFEVLVKMLMSVGPGEDLKTLKREFEEFIKGLICIPVKLPGTRLYKSLKARENLLKIVSKIVRERRESTAEERVAARDAVDVLLQDHDEVEGLPLDFISSHVIELMIPGEETVPMAMTLAVKFLSDSPLALAQLTEENMKLKKQKDDSGLEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVQIKGYLIPKGWCVLASFISVHMDENNYANPHQFDPWRWEQETGSTNSHNFTPFGGGQRLCPGIELARLEISIFLHHFVTTYKWGAEKDEVIHFPTVRMRRKLPIAIATLSS | 478 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 20979121 | 20986614 | + | Sed0015159.1 | Sed14g1163 | 736881 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed14g1163 | 478 | Pfam | Cytochrome P450 | 36 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 420 | 429 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed14g1163 | 478 | CDD | CYP90-like | 67 | 473 | - | - | |
| Sed14g1163 | 478 | Coils | Coil | 310 | 330 | - | - | |
| Sed14g1163 | 478 | PANTHER | CYTOCHROME P450 26 | 35 | 452 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Sed14g1163 | 478 | Gene3D | Cytochrome P450 | 24 | 476 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | P450 superfamily signature | 418 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | P450 superfamily signature | 344 | 355 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | P450 superfamily signature | 141 | 154 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | E-class P450 group I signature | 383 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | E-class P450 group I signature | 276 | 293 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | E-class P450 group I signature | 427 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | PRINTS | E-class P450 group I signature | 417 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | SUPERFAMILY | Cytochrome P450 | 33 | 470 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g1163 | 478 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 25 | 476 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed06g0086 | Sed-Chr6:528307 | Sed14g1163 | Sed-Chr14:20979121 | 1.10E-108 | dispersed | |
| Sed09g0600 | Sed-Chr9:6876910 | Sed14g1163 | Sed-Chr14:20979121 | 1.30E-78 | dispersed | |
| Sed09g1689 | Sed-Chr9:40232290 | Sed14g1163 | Sed-Chr14:20979121 | 1.90E-138 | dispersed | |
| Sed11g2057 | Sed-Chr11:34570422 | Sed14g1163 | Sed-Chr14:20979121 | 4.40E-73 | dispersed | |
| Sed14g1163 | Sed-Chr14:20979121 | Sed05g0854 | Sed-Chr5:6803491 | 9.30E-16 | dispersed | |
| Sed03g1311 | Sed-Chr3:8403634 | Sed14g1163 | Sed-Chr14:20979121 | 3.50E-64 | transposed | |
| Sed10g0961 | Sed-Chr10:7849844 | Sed14g1163 | Sed-Chr14:20979121 | 2.40E-178 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed14g1163 | K12637 | - | csv:101203911 | 767.303 |