Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1221 ATGAACTTTCTGAGGTCTTGCTGGCTTTCGTCCTCGGACAACATTGTACACAATGGTTCGGATTCAGCAGGCCGTCATGAAGGCCTACTATGGTACAAAGATATTGGACAGGACATGAATGGTGAATTTTCAATGGCTGTCGTCCAGGCCAATAACTTGCTTGAGGATCAGAGCCAGATCGAATCAGGTCCGTTGAGCTTGCTCGAATCCGGGCCATATGGAACGTTTATTGGTGTTTACGATGGTCATGGTGGGCCTGAAGCATCAAATTATGTATATGAAAATCTTTTCCACCATCTAAGAAGGTTCACCTCAGAACAACAATCAATGTCTTGTGATGTGATAAATAAAGCATTTCAAGCCACAGAGGAAGGATTCATATCTCTTGTGACTAAACAATGGCAAATGAAGCCCCAAATTGCAGCTGTTGGTTCATGCTGCCTGGTCGGTGTGATTAGTGGTGGCAGTCTTTACACAGCCAACCTTGGTGATTCCCGTGCTGTGCTGGGAAGGCTTGTTCAGGCGACCGAGGAGGTTCTTGCTGTTCAGCTATCAGCAGAGCATAATGTGAGCATAGAAGCTGTCAGAAGGGAGATGCACTCGCTGCACCCGGATGACTCGCATATAGTAGTCTTGAAGCATAATGTATGGCGAGTAAAGGGCTTAATACAGGTTTCTAGATCTATAGGTGATGTGTATCTAAAGAGAGCAGAATTCAACAGGGAACCTTTGTATGCTAAGTTTAGGCTTCGTGAACCGTTCACCCGGCCAATATTGAGCTGTGAACCATCAATTTCCGTGCATGAACTTCAACCACATGATCAATTCATCATATATGCGTCTGATGGTCTGTGGGAGCACCTTAGCAATCAGCAGGCCGTGGATATTATTCGAAATCACCCACATAATGGAAGTGCTAAGAGGTTAGTAATAGCTGCTATGCAGGAAGCTGCTAAGAAACGAGAAATGCGATATTCGGATTTGATGGAAATCGATCGTGGTATCCGTCGTCATTTTCACGATGACATCACAGTCATAGTTGTATTTCTTGACTCAAATCTCATGAGCAGAGCAAGCACGGTCCGAGGCCCAAATACGTCTTTGAGAGGGAGGGGCGTTATCTTACCGAGAAAATCTCTAGCGCCTTTTGCCACAATCTAA 1161 45.13 MNFLRSCWLSSSDNIVHNGSDSAGRHEGLLWYKDIGQDMNGEFSMAVVQANNLLEDQSQIESGPLSLLESGPYGTFIGVYDGHGGPEASNYVYENLFHHLRRFTSEQQSMSCDVINKAFQATEEGFISLVTKQWQMKPQIAAVGSCCLVGVISGGSLYTANLGDSRAVLGRLVQATEEVLAVQLSAEHNVSIEAVRREMHSLHPDDSHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPFTRPILSCEPSISVHELQPHDQFIIYASDGLWEHLSNQQAVDIIRNHPHNGSAKRLVIAAMQEAAKKREMRYSDLMEIDRGIRRHFHDDITVIVVFLDSNLMSRASTVRGPNTSLRGRGVILPRKSLAPFATI 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 21410055 21414244 + Sed0020660.1 Sed14g1221 736939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1221 386 CDD PP2Cc 43 350 IPR001932 -
Sed14g1221 386 PANTHER PROTEIN PHOSPHATASE 37 349 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Sed14g1221 386 SMART PP2C_4 36 348 IPR001932 -
Sed14g1221 386 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169(InterPro)
Sed14g1221 386 ProSiteProfiles PPM-type phosphatase domain profile. 42 350 IPR001932 -
Sed14g1221 386 FunFam Phosphatase 2C family protein 31 360 - -
Sed14g1221 386 Gene3D - 32 360 IPR036457 -
Sed14g1221 386 SUPERFAMILY PP2C-like 51 351 IPR036457 -
Sed14g1221 386 Pfam Protein phosphatase 2C 75 318 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1034 Sed-Chr10:9117934 Sed14g1221 Sed-Chr14:21410055 1.80E-198 dispersed
Sed12g1246 Sed-Chr12:8908618 Sed14g1221 Sed-Chr14:21410055 1.10E-107 dispersed
Sed14g1221 Sed-Chr14:21410055 Sed13g1480 Sed-Chr13:19999970 1.10E-22 dispersed
Sed14g1221 Sed-Chr14:21410055 Sed14g1222 Sed-Chr14:21410055 1.40E-224 tandem
Sed10g1033 Sed-Chr10:9117671 Sed14g1221 Sed-Chr14:21410055 1.80E-198 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1221 K01102 - csv:101219696 688.723