Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1221 | ATGAACTTTCTGAGGTCTTGCTGGCTTTCGTCCTCGGACAACATTGTACACAATGGTTCGGATTCAGCAGGCCGTCATGAAGGCCTACTATGGTACAAAGATATTGGACAGGACATGAATGGTGAATTTTCAATGGCTGTCGTCCAGGCCAATAACTTGCTTGAGGATCAGAGCCAGATCGAATCAGGTCCGTTGAGCTTGCTCGAATCCGGGCCATATGGAACGTTTATTGGTGTTTACGATGGTCATGGTGGGCCTGAAGCATCAAATTATGTATATGAAAATCTTTTCCACCATCTAAGAAGGTTCACCTCAGAACAACAATCAATGTCTTGTGATGTGATAAATAAAGCATTTCAAGCCACAGAGGAAGGATTCATATCTCTTGTGACTAAACAATGGCAAATGAAGCCCCAAATTGCAGCTGTTGGTTCATGCTGCCTGGTCGGTGTGATTAGTGGTGGCAGTCTTTACACAGCCAACCTTGGTGATTCCCGTGCTGTGCTGGGAAGGCTTGTTCAGGCGACCGAGGAGGTTCTTGCTGTTCAGCTATCAGCAGAGCATAATGTGAGCATAGAAGCTGTCAGAAGGGAGATGCACTCGCTGCACCCGGATGACTCGCATATAGTAGTCTTGAAGCATAATGTATGGCGAGTAAAGGGCTTAATACAGGTTTCTAGATCTATAGGTGATGTGTATCTAAAGAGAGCAGAATTCAACAGGGAACCTTTGTATGCTAAGTTTAGGCTTCGTGAACCGTTCACCCGGCCAATATTGAGCTGTGAACCATCAATTTCCGTGCATGAACTTCAACCACATGATCAATTCATCATATATGCGTCTGATGGTCTGTGGGAGCACCTTAGCAATCAGCAGGCCGTGGATATTATTCGAAATCACCCACATAATGGAAGTGCTAAGAGGTTAGTAATAGCTGCTATGCAGGAAGCTGCTAAGAAACGAGAAATGCGATATTCGGATTTGATGGAAATCGATCGTGGTATCCGTCGTCATTTTCACGATGACATCACAGTCATAGTTGTATTTCTTGACTCAAATCTCATGAGCAGAGCAAGCACGGTCCGAGGCCCAAATACGTCTTTGAGAGGGAGGGGCGTTATCTTACCGAGAAAATCTCTAGCGCCTTTTGCCACAATCTAA | 1161 | 45.13 | MNFLRSCWLSSSDNIVHNGSDSAGRHEGLLWYKDIGQDMNGEFSMAVVQANNLLEDQSQIESGPLSLLESGPYGTFIGVYDGHGGPEASNYVYENLFHHLRRFTSEQQSMSCDVINKAFQATEEGFISLVTKQWQMKPQIAAVGSCCLVGVISGGSLYTANLGDSRAVLGRLVQATEEVLAVQLSAEHNVSIEAVRREMHSLHPDDSHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPFTRPILSCEPSISVHELQPHDQFIIYASDGLWEHLSNQQAVDIIRNHPHNGSAKRLVIAAMQEAAKKREMRYSDLMEIDRGIRRHFHDDITVIVVFLDSNLMSRASTVRGPNTSLRGRGVILPRKSLAPFATI | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 21410055 | 21414244 | + | Sed0020660.1 | Sed14g1221 | 736939 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1221 | 386 | CDD | PP2Cc | 43 | 350 | IPR001932 | - | |
Sed14g1221 | 386 | PANTHER | PROTEIN PHOSPHATASE | 37 | 349 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Sed14g1221 | 386 | SMART | PP2C_4 | 36 | 348 | IPR001932 | - | |
Sed14g1221 | 386 | ProSitePatterns | PPM-type phosphatase domain signature. | 76 | 84 | IPR000222 | GO:0043169(InterPro) | |
Sed14g1221 | 386 | ProSiteProfiles | PPM-type phosphatase domain profile. | 42 | 350 | IPR001932 | - | |
Sed14g1221 | 386 | FunFam | Phosphatase 2C family protein | 31 | 360 | - | - | |
Sed14g1221 | 386 | Gene3D | - | 32 | 360 | IPR036457 | - | |
Sed14g1221 | 386 | SUPERFAMILY | PP2C-like | 51 | 351 | IPR036457 | - | |
Sed14g1221 | 386 | Pfam | Protein phosphatase 2C | 75 | 318 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed10g1034 | Sed-Chr10:9117934 | Sed14g1221 | Sed-Chr14:21410055 | 1.80E-198 | dispersed | |
Sed12g1246 | Sed-Chr12:8908618 | Sed14g1221 | Sed-Chr14:21410055 | 1.10E-107 | dispersed | |
Sed14g1221 | Sed-Chr14:21410055 | Sed13g1480 | Sed-Chr13:19999970 | 1.10E-22 | dispersed | |
Sed14g1221 | Sed-Chr14:21410055 | Sed14g1222 | Sed-Chr14:21410055 | 1.40E-224 | tandem | |
Sed10g1033 | Sed-Chr10:9117671 | Sed14g1221 | Sed-Chr14:21410055 | 1.80E-198 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1221 | K01102 | - | csv:101219696 | 688.723 |