Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1225 ATGGCGGAGAGCTTAGAAGAGGTGTATCTCCATGGTGATCTTGACCTTAAAATCTTTGAGGCTGTCAATTTGCCTAATATGGACATAATTTCGAATCGATTTCGTCATTGCTTCACGGCTTGTGGTACTCTTGATTACTTTGCTACTAAATCCGGTGGAACCGCCTCTCGTTCGGTCGCCGGTGAGGAGAAAGTTCACCATGGCCATGGCAAAATCATCACCAGTGATCCATATGTTACGGTTAAGGTTCCTCAAGCTACGGTTGCTCGGACTGGGGTTATAAAGAATTCCCAGAATCCCATTTGGAATGAGCATTTCGTTATCCCTCTTGCACAGAAAATGGCTGAATTGGAATTCCAGGTGAAAGATGACGATGTCTTTGGTGCTGAAGTTATGGGGACGGTTAAATTCCCTGCTCAGCAAATTGCCTCCGGCTTGATCATTAGTGGGTGGTTTCCGGTGATTGGGTCGAATGGTAAGACGCCGAAGCCTGGCACTTCACTCCGAATCGAAATGAAGTTTGTTTCGGTTGAGAAGAATCCGTTTTATCGCCACGGCATTGCTGGAGATCCCGAGCACAAGGGTGTGCGGCACACTTATTTTCCTGTTAGGAAAGGAAGCTCCATGAGATTGTACCAAGATGCTCATGTGCCCGATGGGATGCTGCCGCAGATTGAATTGGATGGAGGGAATGTTTATAGGCCTGAGAAATGTTGGGAGGATATTTGCCATGCTATATCAGAGGCTCATCATATGATTTATATAGTTGGATGGTCTGTTTTTCATAAGGTGAGGCTGCTTAGAGAGTCAACCAGGCCGCTGCCACGAGGCGGGGAATTGACTCTTGGTGATCTCCTCAAATACAAATCAGAAGAGGGTGTTCGAGTTTTGATGATGGTTTGGGATGATAAAACTTCTCACGATAAGTTCTTCATCAACACGGCAGGATTGATGCAGACACATGACGAGGAAACCCGGAAATTTTTCAAGCATTCTTCGGTTATCTGTGTGCTCTCACCTCGCTATCCAAGTGGCAAGCTGAGCTATGTGAAACAAAAGGTTGTAGGGACTGTCTTCACACACCATCAAAAGTGTGTTCTTGTTGATACACAGGGATATGGTAATAATAGGAAGATAACTGCATTTCTTGGAGGTCTTGATCTCTGTGATGGTCGTTACGATACACCTGAGCATCGATTGTTCCGTGATCTCGACACAGTATTTAAGGAAGATTTTCATAATCCTACAATTCCTCCTGGAACCAATGCTCCAAGGCAACCATGGCATGACTTGCACTGTCGGATTGACGGGCCAGCTGCATACGACTTGCTTATAAACTTTGAGCAACGTTGGAACAGAGCCACAAGATGGACAGAATTTGGCCTACGATGCAAGAGAATTACTCACTGGCACGATGCTTTGATAAAAATAGAGCGTATATCATGGATACTAAACCCTAAAGTAACTATCTTACTGGATGGTTCGATAAAAGTTCCAGAGGATGATCCTAAAGTATATGTTTTGGAAGAAGATGATCCTAGAAACTGGCATGTTCAGATTTTCCGATCCATCGACTCTGGTTCCGTTAAAGGGTTTCCAAGAGATGTCCATCTTGCCGAGTCGCAGAATCTTGTATGTGCAAAAAACTTGGCTATAGAGAAAAGCATTGAAATGGCATACATCCAGGCTATCAGATCGGCACAACATTTCATTTATATCGAAAATCAGTATTTTATTGGATCATCATATGGATGGCCGGGATACAAAAATGCCGGAGCTGATAATCTTATTCCCATGGAGTTGGCCCTTAAGATTGCCAGCAAAATAAGAGCCAAGGAAAGATTTGTTGTATATATTATCATACCAATGTGGCCCGAGGGAGATCCAAATAGCGGTCCCATGCAAGAGATTCTTTATTGGCAGGGGCAAACAATGCAAATGATGTATGACATTGTTGCAAGTGAACTGAAGTCATCGGATCAACCAAACTTGGGCCCTCTTGACTATCTAAATTTCTACTGCCTTGGTAAACGGGAAGAGATTCCTGAGAATGGACCAACGACTGACAATGCAACGGTATCGGATTCGATAAAACATAAACGGTTTATGATTTACGTTCATGCCAAGGGGATGATAGTAGATGATGAATATGTAATTATTGGGTCTGCAAATATTAACCAAAGATCTATGGCTGGAACAAAGGACACCGAGATAGCCACGGGCGCGTATCAGCCGCATCACACGTGGGCAAAAAATACGAAACATCCACACGGTCAGATTTACGGGTACAGAATGTCGTTATGGAGCGAGCATCTCGGGATGCTCGATCCATGTTTTGAGGAGCCAGAAACTTTGGAATGTGTGAGAAAAGTCAATGGAATTGCTGAGGATAACTGGAAGAGATTTGTGTCGGATGAATTCACGACATTGCAGGGCCACCTTCTAAGGTATCCGTTGCTCGTGGACGGTGACGGGAAAGTCAGCCCTCTGCCCGGATCTGAAAACTTCCCGGATGTAGGGGGTAAGGTAATTGGGGCTCATTCAACTGCAATTCCAGATGTTCTGACCACATAA 2574 44.41 MAESLEEVYLHGDLDLKIFEAVNLPNMDIISNRFRHCFTACGTLDYFATKSGGTASRSVAGEEKVHHGHGKIITSDPYVTVKVPQATVARTGVIKNSQNPIWNEHFVIPLAQKMAELEFQVKDDDVFGAEVMGTVKFPAQQIASGLIISGWFPVIGSNGKTPKPGTSLRIEMKFVSVEKNPFYRHGIAGDPEHKGVRHTYFPVRKGSSMRLYQDAHVPDGMLPQIELDGGNVYRPEKCWEDICHAISEAHHMIYIVGWSVFHKVRLLRESTRPLPRGGELTLGDLLKYKSEEGVRVLMMVWDDKTSHDKFFINTAGLMQTHDEETRKFFKHSSVICVLSPRYPSGKLSYVKQKVVGTVFTHHQKCVLVDTQGYGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFKEDFHNPTIPPGTNAPRQPWHDLHCRIDGPAAYDLLINFEQRWNRATRWTEFGLRCKRITHWHDALIKIERISWILNPKVTILLDGSIKVPEDDPKVYVLEEDDPRNWHVQIFRSIDSGSVKGFPRDVHLAESQNLVCAKNLAIEKSIEMAYIQAIRSAQHFIYIENQYFIGSSYGWPGYKNAGADNLIPMELALKIASKIRAKERFVVYIIIPMWPEGDPNSGPMQEILYWQGQTMQMMYDIVASELKSSDQPNLGPLDYLNFYCLGKREEIPENGPTTDNATVSDSIKHKRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIATGAYQPHHTWAKNTKHPHGQIYGYRMSLWSEHLGMLDPCFEEPETLECVRKVNGIAEDNWKRFVSDEFTTLQGHLLRYPLLVDGDGKVSPLPGSENFPDVGGKVIGAHSTAIPDVLTT 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 21447685 21454524 + Sed0003343.1 Sed14g1225 736943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1225 857 Gene3D Endonuclease Chain A 528 752 - -
Sed14g1225 857 SUPERFAMILY Phospholipase D/nuclease 553 786 - -
Sed14g1225 857 Gene3D C2 domain 11 183 IPR035892 -
Sed14g1225 857 SUPERFAMILY Phospholipase D/nuclease 196 459 - -
Sed14g1225 857 PANTHER PHOSPHOLIPASE D 9 844 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Sed14g1225 857 Pfam Phospholipase D C terminal 777 846 IPR024632 -
Sed14g1225 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824(InterPro)
Sed14g1225 857 CDD C2_plant_PLD 8 175 - -
Sed14g1225 857 PIRSF PLD_plant 1 857 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Sed14g1225 857 FunFam Phospholipase D delta 229 473 - -
Sed14g1225 857 Gene3D Endonuclease Chain A 227 467 - -
Sed14g1225 857 SMART C2_3c 13 151 IPR000008 -
Sed14g1225 857 SMART pld_4 702 729 IPR001736 GO:0003824(InterPro)
Sed14g1225 857 SMART pld_4 357 392 IPR001736 GO:0003824(InterPro)
Sed14g1225 857 Pfam Phospholipase D Active site motif 704 729 IPR001736 GO:0003824(InterPro)
Sed14g1225 857 Pfam C2 domain 71 153 IPR000008 -
Sed14g1225 857 ProSiteProfiles C2 domain profile. 1 152 IPR000008 -
Sed14g1225 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 357 392 IPR001736 GO:0003824(InterPro)
Sed14g1225 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 174 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g1775 Sed-Chr4:32375482 Sed14g1225 Sed-Chr14:21447685 1.00E-41 dispersed
Sed09g0264 Sed-Chr9:2120718 Sed14g1225 Sed-Chr14:21447685 4.40E-40 dispersed
Sed11g1113 Sed-Chr11:26832157 Sed14g1225 Sed-Chr14:21447685 4.70E-304 dispersed
Sed07g2146 Sed-Chr7:37030639 Sed14g1225 Sed-Chr14:21447685 8.30E-69 transposed
Sed10g1038 Sed-Chr10:9182269 Sed14g1225 Sed-Chr14:21447685 0.00E+00 wgd
Sed11g1112 Sed-Chr11:26832157 Sed14g1225 Sed-Chr14:21447685 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1225 K01115 - csv:101217251 1603.96