Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1250 | ATGGCGTTTTCCGATGAGAACAGTCATAACTTGATTAAACCAACTGGGTTTCTTCCAGGAGGGTTGGAGAAGAGTGGGAGGGTGTTTGGCCAGGAGAGTAGTAGAATCAATAATCGAAGAGTTCTTAATGACATTAATCAGAATTCTGTGGTGAATCAAGCTTATCCTTGTGTTGTCAACAAGAGAGTTCTTTCCGGAAAGCAAGAGATCTGTGAGAAGAAGCAGGTTGATCCATTTCATAGACCGATTACAAGGAAATTTGCTGCTCAAATTGCGAGTAGTCAACAGCTCCATCAGCCACAAGAAAATAATAAACCCAATTTGTTTCTTACAAACTCAAATGCATTTGGACATTCCATATTTGTAGACGACAGTTGCAAAACAGTTGAAAATGACCATCCAGTTCCTATGTTCTTGGAGAAACCAGAACCATCATTGCATCAGGAAGCAAGCCAAATGGAGGAAGTTGAAATGGAGGATATCGAAGACTACGACGAAGACCCAGTAGTCGACATTGACCTTGAAGATTCCAAGAACCCTCTTGCTGTTGTCGACTACATTGACGATCTCTACACACACTACAGAAAGATAGAGAATTCAAGCTGTGTTCCCCCAAACTACATGACAAAACAAATTGACATTAATGAGAAAATGAGATCCATACTAATTGACTGGCTTATAGAGGTGCATGACAAGTTTGATCTCATGGGAGAAACATTGTTTCTCACTGTGAATCTGATAGACAGATTTTTGTCCCAAAAATCAATTGTGAGAAAGAAGCTTCAACTGGTTGGTTTAGTTTCTTTGCTCTTAGCTTGCAAATATGAGGAAGTGTCTGTTCCTGTTGTGGGAGATTTGATTCTTATTTCTGATAAAGCTTACTCTAGAAGAGAAGTTCTTGAAATGGAGACAGTGATGCTCAATTGTTTGCAGTTTAATATGTCAGTTCCTACACCCTTTGTTTTCCTCCAAAGGTTCCTTAAAGCCGCTCAATCTGACAAAAAGCTTGAGCTAATGGCGTTCTTCTTGATCGAGCTCTCGCTTGTGGAGTATGTAATGCTGAGATTCCCGCCCTCACTGCTAGCGGCGGCGGCGATTTACACTGCTCAATGTACTCTCACTGGTGTCAAAGGATGGAGCCGGACCTGCGAATGGCATTCCACGTTCTCAGAAGACCAACTTCTAGAATGCTCTAGGCTGATGGTGGGGTTCCATCAGACGGCGGCGACCGGGAAGCTCACCGGGGTTCATAGGAAGTACTGTACGTCAAAATTTAACTATACGGCAAAATGTGAACCTGCACATTTTCTTTTGCAGACTCAGCAACAATAA | 1332 | 42.12 | MAFSDENSHNLIKPTGFLPGGLEKSGRVFGQESSRINNRRVLNDINQNSVVNQAYPCVVNKRVLSGKQEICEKKQVDPFHRPITRKFAAQIASSQQLHQPQENNKPNLFLTNSNAFGHSIFVDDSCKTVENDHPVPMFLEKPEPSLHQEASQMEEVEMEDIEDYDEDPVVDIDLEDSKNPLAVVDYIDDLYTHYRKIENSSCVPPNYMTKQIDINEKMRSILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQKSIVRKKLQLVGLVSLLLACKYEEVSVPVVGDLILISDKAYSRREVLEMETVMLNCLQFNMSVPTPFVFLQRFLKAAQSDKKLELMAFFLIELSLVEYVMLRFPPSLLAAAAIYTAQCTLTGVKGWSRTCEWHSTFSEDQLLECSRLMVGFHQTAATGKLTGVHRKYCTSKFNYTAKCEPAHFLLQTQQQ | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 21622118 | 21625576 | - | Sed0027501.1 | Sed14g1250 | 736968 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1250 | 443 | SMART | cyclin_7 | 224 | 308 | IPR013763 | - | |
Sed14g1250 | 443 | SMART | cyclin_7 | 321 | 403 | IPR013763 | - | |
Sed14g1250 | 443 | Pfam | Cyclin, N-terminal domain | 189 | 315 | IPR006671 | - | |
Sed14g1250 | 443 | Gene3D | - | 189 | 429 | - | - | |
Sed14g1250 | 443 | CDD | CYCLIN_AtCycB-like_rpt2 | 317 | 433 | - | - | |
Sed14g1250 | 443 | FunFam | G2/mitotic-specific cyclin-1 | 311 | 429 | - | - | |
Sed14g1250 | 443 | SUPERFAMILY | Cyclin-like | 316 | 434 | IPR036915 | - | |
Sed14g1250 | 443 | Gene3D | - | 203 | 315 | - | - | |
Sed14g1250 | 443 | ProSitePatterns | Cyclins signature. | 219 | 250 | IPR048258 | - | |
Sed14g1250 | 443 | SMART | Cyclin_C_2 | 317 | 434 | IPR004367 | - | |
Sed14g1250 | 443 | Pfam | Cyclin, C-terminal domain | 317 | 433 | IPR004367 | - | |
Sed14g1250 | 443 | CDD | CYCLIN_AtCycB-like_rpt1 | 166 | 312 | - | - | |
Sed14g1250 | 443 | PANTHER | CYCLINS | 158 | 421 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Sed14g1250 | 443 | FunFam | G2/mitotic-specific cyclin | 203 | 310 | - | - | |
Sed14g1250 | 443 | SUPERFAMILY | Cyclin-like | 178 | 314 | IPR036915 | - | |
Sed14g1250 | 443 | PIRSF | Cyclin_A_B_D_E | 22 | 443 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g3556 | Sed-Chr4:44941154 | Sed14g1250 | Sed-Chr14:21622118 | 4.40E-53 | dispersed | |
Sed10g1067 | Sed-Chr10:9737830 | Sed14g1250 | Sed-Chr14:21622118 | 2.80E-134 | dispersed | |
Sed13g2048 | Sed-Chr13:25269435 | Sed14g1250 | Sed-Chr14:21622118 | 2.70E-47 | dispersed | |
Sed14g0043 | Sed-Chr14:554566 | Sed14g1250 | Sed-Chr14:21622118 | 8.70E-64 | dispersed | |
Sed14g0044 | Sed-Chr14:554566 | Sed14g1250 | Sed-Chr14:21622118 | 7.20E-64 | dispersed | |
Sed14g1250 | Sed-Chr14:21622118 | Sed14g1252 | Sed-Chr14:21622118 | 1.60E-187 | dispersed | |
Sed14g1250 | Sed-Chr14:21622118 | Sed14g1251 | Sed-Chr14:21622118 | 5.20E-247 | tandem | |
Sed01g2437 | Sed-Chr1:18169120 | Sed14g1250 | Sed-Chr14:21622118 | 2.20E-120 | transposed | |
Sed10g1066 | Sed-Chr10:9737830 | Sed14g1250 | Sed-Chr14:21622118 | 9.20E-212 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1250 | K21777 | - | csv:101216622 | 778.474 |