Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1251 ATGGCGTTTTCCGATGAGAACAGTCATAACTTGATTAAACCAACTGGGTTTCTTCCAGGAGGGTTGGAGAAGAGTGGGAGGGTGTTTGGCCAGGAGAGTAGTAGAATCAATAATCGAAGAGTTCTTAATGACATTAATCAGAATTCTGTGGTGAATCAAGCTTATCCTTGTGTTGTCAACAAGAGAGTTCTTTCCGGAAAGCAAGAGATCTGTGAGAAGAAGCAGGTTGATCCATTTCATAGACCGATTACAAGGAAATTTGCTGCTCAAATTGCGAGTAGTCAACAGCTCCATCAGCCACAAGAAAATAATAAACCCAATTTGTTTCTTACAAACTCAAATGCATTTGGACATTCCATATTTGTAGACGACAGTTGCAAAACAGTTGAAAATGACCATCCAGTTCCTATGTTCTTGGAGAAACCAGAACCATCATTGCATCAGGAAGCAAGCCAAATGGAGGAAGTTGAAATGGAGGATATCGAAGACTACGACGAAGACCCAGTAGTCGACATTGACCTTGAAGATTCCAAGAACCCTCTTGCTGTTGTCGACTACATTGACGATCTCTACACACACTACAGAAAGATAGAGAATTCAAGCTGTGTTCCCCCAAACTACATGACAAAACAAATTGACATTAATGAGAAAATGAGATCCATACTAATTGACTGGCTTATAGAGGTGCATGACAAGTTTGATCTCATGGGAGAAACATTGTTTCTCACTGTGAATCTGATAGACAGATTTTTGTCCCAAAAATCAATTGTGAGAAAGAAGCTTCAACTGGTTGGTTTAGTTTCTTTGCTCTTAGCTTGCAAATATGAGGAAGTGTCTGTTCCTGTTGTGGGAGATTTGATTCTTATTTCTGATAAAGCTTACTCTAGAAGAGAAGTTCTTGAAATGGAGACAGTGATGCTCAATTGTTTGCAGTTTAATATGTCAGTTCCTACACCCTTTGTTTTCCTCCAAAGGTTCCTTAAAGCCGCTCAATCTGACAAAAAGCTTGAGCTAATGGCGTTCTTCTTGATCGAGCTCTCGCTTGTGGAGTATGTAATGCTGAGATTCCCGCCCTCACTGCTAGCGGCGGCGGCGATTTACACTGCTCAATGTACTCTCACTGGTGTCAAAGGATGGAGCCGGACCTGCGAATGGCATTCCACGTTCTCAGAAGACCAACTTCTGTATGGTTTTTGTTTTGATCTAATTCTCTCGAGTTTTCCTCTCCTTCAAATTTTAATGGTGGGGGGGGGGGCTGGCATTGAATTTTGCAGAGAATGCTCTAGGCTGATGGTGGGGTTCCATCAGACGGCGGCGACCGGGAAGCTCACCGGGGTTCATAGGAAGTACTGTACGTCAAAATTTAACTATACGGCAAAATGTGAACCTGCACATTTTCTTTTGCAGACTCAGCAACAATAA 1422 42.12 MAFSDENSHNLIKPTGFLPGGLEKSGRVFGQESSRINNRRVLNDINQNSVVNQAYPCVVNKRVLSGKQEICEKKQVDPFHRPITRKFAAQIASSQQLHQPQENNKPNLFLTNSNAFGHSIFVDDSCKTVENDHPVPMFLEKPEPSLHQEASQMEEVEMEDIEDYDEDPVVDIDLEDSKNPLAVVDYIDDLYTHYRKIENSSCVPPNYMTKQIDINEKMRSILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQKSIVRKKLQLVGLVSLLLACKYEEVSVPVVGDLILISDKAYSRREVLEMETVMLNCLQFNMSVPTPFVFLQRFLKAAQSDKKLELMAFFLIELSLVEYVMLRFPPSLLAAAAIYTAQCTLTGVKGWSRTCEWHSTFSEDQLLYGFCFDLILSSFPLLQILMVGGGAGIEFCRECSRLMVGFHQTAATGKLTGVHRKYCTSKFNYTAKCEPAHFLLQTQQQ 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 21622118 21625576 - Sed0027501.2 Sed14g1251 736969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1251 473 Gene3D - 189 395 - -
Sed14g1251 473 FunFam G2/mitotic-specific cyclin 203 315 - -
Sed14g1251 473 ProSitePatterns Cyclins signature. 219 250 IPR048258 -
Sed14g1251 473 SUPERFAMILY Cyclin-like 178 314 IPR036915 -
Sed14g1251 473 CDD CYCLIN_AtCycB-like_rpt2 317 463 - -
Sed14g1251 473 SUPERFAMILY Cyclin-like 316 396 IPR036915 -
Sed14g1251 473 CDD CYCLIN_AtCycB-like_rpt1 166 312 - -
Sed14g1251 473 SMART Cyclin_C_2 317 464 IPR004367 -
Sed14g1251 473 Gene3D - 203 315 - -
Sed14g1251 473 Pfam Cyclin, N-terminal domain 189 315 IPR006671 -
Sed14g1251 473 PANTHER CYCLINS 158 412 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Sed14g1251 473 PIRSF Cyclin_A_B_D_E 22 403 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Sed14g1251 473 PIRSF Cyclin_A_B_D_E 412 473 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Sed14g1251 473 SMART cyclin_7 224 308 IPR013763 -
Sed14g1251 473 SMART cyclin_7 321 405 IPR013763 -
Sed14g1251 473 Pfam Cyclin, C-terminal domain 317 394 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1066 Sed-Chr10:9737830 Sed14g1251 Sed-Chr14:21622118 2.30E-207 dispersed
Sed14g1251 Sed-Chr14:21622118 Sed14g1253 Sed-Chr14:21622118 1.70E-187 dispersed
Sed14g1250 Sed-Chr14:21622118 Sed14g1251 Sed-Chr14:21622118 5.20E-247 tandem
Sed14g1251 Sed-Chr14:21622118 Sed14g1252 Sed-Chr14:21622118 1.70E-187 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1251 K21777 - csv:101216622 762.681