Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1258 ATGTCGTGTTCGTCTTCATCGGCGTCGGAGGATGACGAGGGAATCGATTCTTACCGGAAAGGAGGGTACCATGCGGTGAGGATCGGCGATCATTTCGCCGGCGGCCGATATGTCGCTCAACGGAAGCTCGGTTGGGGTCAGTTCTCCACCGTCTGGCTCGCCTTTGATTCTCGCACCTCTAAATATGTATCACTTAAGATCCAGAAAAGTGGTCCCCAGTTTGCTGAAGCTGCACTTCATGAAATTGAAGTTCTTTCAACGATTTCAAAGAGTGATCCCTCAAGCTCCAAGTGCATTGTGCAACTCATCGATCATTTTAAGCATGCAGGGCCAAATGGGCAACATCTGTGCATGGTTCTTGAATTTCTTGGCGATAGCTTACTTCGGTTGATCAAGTATAACCGTTATAAAGTTCTCGAGTTGAATAAAGTCAGGGAGATCTGCAAATGTATTTTGGTTGCTCTGGATCATTTGCACAGAGAACTTGGCATTATCCACTCTGATCTGAAACCTGAAAATATTCTTCTACTTTCAACTATTGATCCTACCAAAGATCCTGTGAGATCTGGACAGGCCCCAATTCTCGAAAGGCCTGAGGGGAACCCGAACGGTGGAGCAACTATGAATCTTATTGAGAGGAAATTGAAAAGAAGAGCAAGAAAAGCAGTTTCTAGGATCTCAGAAAGAAAATTTTCTATAGGGGGAGTAACCCCAAAGCCAGACAGGAAACTGGATGGTATTGATCTGAGGTGCAAGGTTGTAGATTTTGGCAATGCGTGTTGGGCAGATAAGCAGTTTATGGAAGAAATTCAAACAAGACAGTACAGAGCTCCTGAAGTCATACTGCAGTCTGGATATTCCTACTCGGTCGACATGTGGTCACTTGGTTGCATCGCTTTTGAACTCGCCACAGGTGACATGATGTTTACCCCAAAAGGAGGACAAGACTATAGTGAGGACGAGGATCATCTTGCATTGATGATGGAACTCCTTGGGAAAATGCCTAGAAAAACGGCAATAGGAGGCGCTCGATCAAAAGATTACTTTGACAGGCATGGGGACCTAAAGAGGATTCGGAGGCTAAAATTCTGTTCTCTCGATCGACTACTGATCCAGAAATATAAGTTTTCAAATGCTGATGCTCAGTCATTTTCCGCGTTTCTCAGTCCCATTCTCGATTTTGCTCCCGAGAAGCGACCAACCGCTCAGCAATGCCTGCAACATCCTTGGCTCAATCCTAGCAACTTATCTCAAAGCGAAGTGAAGAATAAAACAGAGGTCGAAAATGTGAATGTTGGAATGAGCAACCTCCAGATTAAAGTGGGTAAGTGA 1332 44.97 MSCSSSSASEDDEGIDSYRKGGYHAVRIGDHFAGGRYVAQRKLGWGQFSTVWLAFDSRTSKYVSLKIQKSGPQFAEAALHEIEVLSTISKSDPSSSKCIVQLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYNRYKVLELNKVREICKCILVALDHLHRELGIIHSDLKPENILLLSTIDPTKDPVRSGQAPILERPEGNPNGGATMNLIERKLKRRARKAVSRISERKFSIGGVTPKPDRKLDGIDLRCKVVDFGNACWADKQFMEEIQTRQYRAPEVILQSGYSYSVDMWSLGCIAFELATGDMMFTPKGGQDYSEDEDHLALMMELLGKMPRKTAIGGARSKDYFDRHGDLKRIRRLKFCSLDRLLIQKYKFSNADAQSFSAFLSPILDFAPEKRPTAQQCLQHPWLNPSNLSQSEVKNKTEVENVNVGMSNLQIKVGK 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 21650415 21655099 - Sed0001899.1 Sed14g1258 736976
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0513 Sed-Chr10:3338326 Sed14g1258 Sed-Chr14:21650415 3.80E-170 dispersed
Sed11g2150 Sed-Chr11:35352782 Sed14g1258 Sed-Chr14:21650415 2.30E-31 dispersed
Sed14g0346 Sed-Chr14:3583786 Sed14g1258 Sed-Chr14:21650415 9.20E-129 dispersed
Sed14g1258 Sed-Chr14:21650415 Sed05g0548 Sed-Chr5:3992272 4.00E-13 dispersed
Sed10g0512 Sed-Chr10:3338326 Sed14g1258 Sed-Chr14:21650415 6.40E-237 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80179 PF00069 Pkinase 1.20E-24 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1258 K08832 - csv:101214127 805.823