Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1265 ATGTTTCCCAGACTTGTTAATCCCGACGGAGACATTCAGATCCATGGCGGCCACGGCCACAGCCACAGCCACCGGGGAGATCCTTGTCTCGTCTTGACTTCAGATCCCAAACCTCGCCTCCGCTGGACCGCTGATCTCCACGAGCGCTTCATCGATGCCGTCACTCAGCTCGGCGGTGCTAGCAAAGCTACACCAAAAGCACTAATGCGAACTATGAATGTCAAAGGACTGACTCTCTTTCATCTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGAGTGAGACATCTAAAGATGGTGGATATCTTTTAGAAAGTCCAAGTACCAATAATTTCTCTCCTGACTTGCCAATATCTGAAATGGCCGAGGGTTATGAAGTTAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTTGAGGCAGAGAAGCACCTACGAATTCGACAGGATGCCGAGCGAAGATATTTGGCCATGCTTGAGAGTGCTTGTAAAATGCTTGCAGACCAATTCATTGGAGGTGCAGTTTCGGACTCAGACTGCAAGAAGTCTCAAGGACAGGATCGTAAGAGCCCGAAAAGTTCCTCCATCGACCCATTTAGTTTCTACGCTACGCAATTGGAAGAGATGGAAAGATTGAATGGTACAGATGAAGTGCAGGCTAATCTTCCTTTCCAAAGGGCTGATTGTTCCACCGAAAGCTGCCTAACCTCAAACGAGAGTCCTGTGGGATTGGCCATGGAAAAATCTCCTGTTGCAAGCAAGAAAAACATAGTTAACTTGGACTCAGCAACTGCATCTTTGATTTGGGGTGAAGCCAAGGAAAGAATACAAGATGCTAGCATCATTCAAGTTAACAATCACGACATATCCGGGTGCGACATGTGGGGATGA 927 46.82 MFPRLVNPDGDIQIHGGHGHSHSHRGDPCLVLTSDPKPRLRWTADLHERFIDAVTQLGGASKATPKALMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMSETSKDGGYLLESPSTNNFSPDLPISEMAEGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLESACKMLADQFIGGAVSDSDCKKSQGQDRKSPKSSSIDPFSFYATQLEEMERLNGTDEVQANLPFQRADCSTESCLTSNESPVGLAMEKSPVASKKNIVNLDSATASLIWGEAKERIQDASIIQVNNHDISGCDMWG 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 21700203 21704682 - Sed0017464.1 Sed14g1265 736983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1265 308 Pfam MYB-CC type transfactor, LHEQLE motif 132 177 IPR025756 -
Sed14g1265 308 SUPERFAMILY Homeodomain-like 37 93 IPR009057 -
Sed14g1265 308 MobiDBLite consensus disorder prediction 92 121 - -
Sed14g1265 308 Gene3D - 36 94 - -
Sed14g1265 308 MobiDBLite consensus disorder prediction 1 29 - -
Sed14g1265 308 MobiDBLite consensus disorder prediction 189 209 - -
Sed14g1265 308 FunFam Myb family transcription factor 36 94 - -
Sed14g1265 308 Pfam Myb-like DNA-binding domain 39 90 IPR001005 -
Sed14g1265 308 MobiDBLite consensus disorder prediction 107 121 - -
Sed14g1265 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 92 IPR006447 GO:0003677(InterPro)
Sed14g1265 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 16 286 IPR046955 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0530 Sed-Chr10:3426951 Sed14g1265 Sed-Chr14:21700203 1.70E-132 dispersed
Sed12g0381 Sed-Chr12:2306597 Sed14g1265 Sed-Chr14:21700203 4.50E-37 dispersed
Sed14g0076 Sed-Chr14:827922 Sed14g1265 Sed-Chr14:21700203 9.60E-17 dispersed
Sed14g1265 Sed-Chr14:21700203 Sed14g1512 Sed-Chr14:23423667 5.60E-14 dispersed
Sed10g0529 Sed-Chr10:3414942 Sed14g1265 Sed-Chr14:21700203 2.70E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40634 PF14379 Myb_CC_LHEQLE 5.00E-16 No_clan Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1265 - - - 0.0