Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1271 ATGGCCTCTACTGTTGGTTCCAAAGCTTCTTCAAATCAGCCACCAAAAACAGCCAATGGTGAAATGGCTAATGGGAAAAATGTTGGGCCCTTAACTAAACCCGAATCAGCTACTCCTGATCAGCCTAAATCAGTGAAGAGTATCTCAAAGCAGGATATAGAAGTATCATCCGACAAAAAGTCGCCAGTATCGAGTCAAAATGGATTAGCCAAGTCGTTGAGTGAGAATTTTAATTTCAGTATTTCGTCACCTGGTCTGAAGCAAGCACCAACTGAAGTAGATCCCCTCCACAATGTAGCTAAATGCTCACTTGGCAACTCACCAAGCCAAGAGAAGAAAACTTCTGAATTTGGAAGTGTAAAGAGCAATTCTTTTTCTGTCAAAGCAAGTGATGGGACTAGCTGTGTTGCCAAGACCAGTGGAAGTGCCAAGGTTAGCGACCATGGTAACTTTGCCGAGAGTGGCAAGAGCAGTATATGTCGAGGGAGCACGAGCACGGATATAAGTGATGAGAGCTCTTGCAGTAGTATTAGTAGTAGTATCAGTAAACCTCACAAAGCAAATGATTTGAGATGGGAGGCCATTCAAGCTGTCCGTGCAAAAGAAGGGGTGATGGGATTAGGACATTTTAGACTTCTGAAGAAGTTGGGTTGTGGGGATATAGGGAGTGTTTATCTCTCTGAGTTAAGTGGAACAAAATGCCATTTTGCAATGAAGGTCATGGATAAAAATACTCTAGCGAGTCGTAAAAAATTGCTTCGGGCGCAGACTGAAAGAGAAATACTTCAATCTCTTGACCACCCCTTCCTTCCGACGCTATACACCCACTTTGAGACAGAAAAATTCTCTTGCTTGGTGATGGAGTTCTGCCCTGGAGGTGACTTGCACACTCTAAGGCAGAGGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAGTTCTATGTTGCAGAGGTTCTTCTTGCACTTGAATACCTGCACATGCTTGGGATTGTGTACCGCGATCTTAAACCAGAAAATGTCCTCGTGAGGGAAGATGGACACATAATGCTTTCAGATTTCGACCTATCGCTCCGTTGCACGGTTAGTCCAACTCTAGTAAAAAATCTCTCAGCAGAGACTGAGGCTTTAAGAAAGAACACAAGTTACTGCGTGCAGCCTGCTTGCATTGAGCCTTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCGCCTCGCCTGTTTTCTAGTAAGTCGAAGAAGGAACGTAAACAAAAAACTGAAATGGGAAATCAGGTCAGTCCATTGCCAGAACTCATTGCTGAACCAACCGATGCACGATCCATGTCTTTTGTTGGAACTCATGAGTACTTGGCACCTGAGATCATCAAGGGTGAAGGCCATGGAAGTGCTGTAGATTGGTGGACTTTTGGAATTTTTCTATACGAGCTATTCTTTGGTAAAACTCCCTTTAAGGGGTCTGGAAATCGAGCTACATTATTCAACATTGTCGGTGAGTCACTTCGGTTTCCAGATGCACCAGTTGTGAGTTTTGCTGCAAAGGATCTCATAAGGGGATTGCTAGTGAAGGAACCACAGCACAGATTGGCTTATAAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAACTGGGCATTAATACGATGTGCAACACCTCCCGAAATCCCAAGGCCGGTCGAGATCGAGAGGATACCACAGGCAGTGGCATCGACCAGTGAAAAGGCCGCTGCTATTCCAGCAGCTGCAGATAAAAAAGGTTCCGATAATTATCTCGAGTTTGATTTCTTTTAG 1815 44.74 MASTVGSKASSNQPPKTANGEMANGKNVGPLTKPESATPDQPKSVKSISKQDIEVSSDKKSPVSSQNGLAKSLSENFNFSISSPGLKQAPTEVDPLHNVAKCSLGNSPSQEKKTSEFGSVKSNSFSVKASDGTSCVAKTSGSAKVSDHGNFAESGKSSICRGSTSTDISDESSCSSISSSISKPHKANDLRWEAIQAVRAKEGVMGLGHFRLLKKLGCGDIGSVYLSELSGTKCHFAMKVMDKNTLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKNLSAETEALRKNTSYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKQKTEMGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELFFGKTPFKGSGNRATLFNIVGESLRFPDAPVVSFAAKDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVEIERIPQAVASTSEKAAAIPAAADKKGSDNYLEFDFF 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 21747693 21751647 + Sed0010594.2 Sed14g1271 736989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1271 604 Gene3D Phosphorylase Kinase; domain 1 208 293 - -
Sed14g1271 604 FunFam serine/threonine-protein kinase D6PK-like 294 361 - -
Sed14g1271 604 MobiDBLite consensus disorder prediction 1 69 - -
Sed14g1271 604 Pfam Protein kinase domain 444 547 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1271 604 Pfam Protein kinase domain 211 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1271 604 CDD STKc_phototropin_like 209 570 - -
Sed14g1271 604 FunFam Serine/threonine-protein kinase D6PK-like 208 293 - -
Sed14g1271 604 MobiDBLite consensus disorder prediction 37 51 - -
Sed14g1271 604 Gene3D Transferase(Phosphotransferase) domain 1 441 565 - -
Sed14g1271 604 SMART serkin_6 210 547 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1271 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1271 604 MobiDBLite consensus disorder prediction 1 20 - -
Sed14g1271 604 FunFam serine/threonine-protein kinase D6PK-like 442 565 - -
Sed14g1271 604 Gene3D Transferase(Phosphotransferase) domain 1 294 362 - -
Sed14g1271 604 MobiDBLite consensus disorder prediction 146 183 - -
Sed14g1271 604 ProSiteProfiles Protein kinase domain profile. 210 547 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1271 604 SUPERFAMILY Protein kinase-like (PK-like) 184 573 IPR011009 -
Sed14g1271 604 PANTHER FLIPPASE KINASE 1-RELATED 78 579 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0547 Sed-Chr10:3536636 Sed14g1271 Sed-Chr14:21747693 3.20E-271 dispersed
Sed11g1164 Sed-Chr11:27556452 Sed14g1271 Sed-Chr14:21747693 2.10E-230 dispersed
Sed14g1271 Sed-Chr14:21747693 Sed05g0572 Sed-Chr5:4171466 1.30E-43 dispersed
Sed14g1270 Sed-Chr14:21747693 Sed14g1271 Sed-Chr14:21747693 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80181 PF00069 Pkinase 7.10E-38 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1271 K08286 - csv:101209748 1028.08