Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1271 | ATGGCCTCTACTGTTGGTTCCAAAGCTTCTTCAAATCAGCCACCAAAAACAGCCAATGGTGAAATGGCTAATGGGAAAAATGTTGGGCCCTTAACTAAACCCGAATCAGCTACTCCTGATCAGCCTAAATCAGTGAAGAGTATCTCAAAGCAGGATATAGAAGTATCATCCGACAAAAAGTCGCCAGTATCGAGTCAAAATGGATTAGCCAAGTCGTTGAGTGAGAATTTTAATTTCAGTATTTCGTCACCTGGTCTGAAGCAAGCACCAACTGAAGTAGATCCCCTCCACAATGTAGCTAAATGCTCACTTGGCAACTCACCAAGCCAAGAGAAGAAAACTTCTGAATTTGGAAGTGTAAAGAGCAATTCTTTTTCTGTCAAAGCAAGTGATGGGACTAGCTGTGTTGCCAAGACCAGTGGAAGTGCCAAGGTTAGCGACCATGGTAACTTTGCCGAGAGTGGCAAGAGCAGTATATGTCGAGGGAGCACGAGCACGGATATAAGTGATGAGAGCTCTTGCAGTAGTATTAGTAGTAGTATCAGTAAACCTCACAAAGCAAATGATTTGAGATGGGAGGCCATTCAAGCTGTCCGTGCAAAAGAAGGGGTGATGGGATTAGGACATTTTAGACTTCTGAAGAAGTTGGGTTGTGGGGATATAGGGAGTGTTTATCTCTCTGAGTTAAGTGGAACAAAATGCCATTTTGCAATGAAGGTCATGGATAAAAATACTCTAGCGAGTCGTAAAAAATTGCTTCGGGCGCAGACTGAAAGAGAAATACTTCAATCTCTTGACCACCCCTTCCTTCCGACGCTATACACCCACTTTGAGACAGAAAAATTCTCTTGCTTGGTGATGGAGTTCTGCCCTGGAGGTGACTTGCACACTCTAAGGCAGAGGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAGTTCTATGTTGCAGAGGTTCTTCTTGCACTTGAATACCTGCACATGCTTGGGATTGTGTACCGCGATCTTAAACCAGAAAATGTCCTCGTGAGGGAAGATGGACACATAATGCTTTCAGATTTCGACCTATCGCTCCGTTGCACGGTTAGTCCAACTCTAGTAAAAAATCTCTCAGCAGAGACTGAGGCTTTAAGAAAGAACACAAGTTACTGCGTGCAGCCTGCTTGCATTGAGCCTTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCGCCTCGCCTGTTTTCTAGTAAGTCGAAGAAGGAACGTAAACAAAAAACTGAAATGGGAAATCAGGTCAGTCCATTGCCAGAACTCATTGCTGAACCAACCGATGCACGATCCATGTCTTTTGTTGGAACTCATGAGTACTTGGCACCTGAGATCATCAAGGGTGAAGGCCATGGAAGTGCTGTAGATTGGTGGACTTTTGGAATTTTTCTATACGAGCTATTCTTTGGTAAAACTCCCTTTAAGGGGTCTGGAAATCGAGCTACATTATTCAACATTGTCGGTGAGTCACTTCGGTTTCCAGATGCACCAGTTGTGAGTTTTGCTGCAAAGGATCTCATAAGGGGATTGCTAGTGAAGGAACCACAGCACAGATTGGCTTATAAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAACTGGGCATTAATACGATGTGCAACACCTCCCGAAATCCCAAGGCCGGTCGAGATCGAGAGGATACCACAGGCAGTGGCATCGACCAGTGAAAAGGCCGCTGCTATTCCAGCAGCTGCAGATAAAAAAGGTTCCGATAATTATCTCGAGTTTGATTTCTTTTAG | 1815 | 44.74 | MASTVGSKASSNQPPKTANGEMANGKNVGPLTKPESATPDQPKSVKSISKQDIEVSSDKKSPVSSQNGLAKSLSENFNFSISSPGLKQAPTEVDPLHNVAKCSLGNSPSQEKKTSEFGSVKSNSFSVKASDGTSCVAKTSGSAKVSDHGNFAESGKSSICRGSTSTDISDESSCSSISSSISKPHKANDLRWEAIQAVRAKEGVMGLGHFRLLKKLGCGDIGSVYLSELSGTKCHFAMKVMDKNTLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKNLSAETEALRKNTSYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKQKTEMGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELFFGKTPFKGSGNRATLFNIVGESLRFPDAPVVSFAAKDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVEIERIPQAVASTSEKAAAIPAAADKKGSDNYLEFDFF | 604 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 21747693 | 21751647 | + | Sed0010594.2 | Sed14g1271 | 736989 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1271 | 604 | Gene3D | Phosphorylase Kinase; domain 1 | 208 | 293 | - | - | |
Sed14g1271 | 604 | FunFam | serine/threonine-protein kinase D6PK-like | 294 | 361 | - | - | |
Sed14g1271 | 604 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
Sed14g1271 | 604 | Pfam | Protein kinase domain | 444 | 547 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1271 | 604 | Pfam | Protein kinase domain | 211 | 363 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1271 | 604 | CDD | STKc_phototropin_like | 209 | 570 | - | - | |
Sed14g1271 | 604 | FunFam | Serine/threonine-protein kinase D6PK-like | 208 | 293 | - | - | |
Sed14g1271 | 604 | MobiDBLite | consensus disorder prediction | 37 | 51 | - | - | |
Sed14g1271 | 604 | Gene3D | Transferase(Phosphotransferase) domain 1 | 441 | 565 | - | - | |
Sed14g1271 | 604 | SMART | serkin_6 | 210 | 547 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1271 | 604 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 331 | 343 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g1271 | 604 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Sed14g1271 | 604 | FunFam | serine/threonine-protein kinase D6PK-like | 442 | 565 | - | - | |
Sed14g1271 | 604 | Gene3D | Transferase(Phosphotransferase) domain 1 | 294 | 362 | - | - | |
Sed14g1271 | 604 | MobiDBLite | consensus disorder prediction | 146 | 183 | - | - | |
Sed14g1271 | 604 | ProSiteProfiles | Protein kinase domain profile. | 210 | 547 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1271 | 604 | SUPERFAMILY | Protein kinase-like (PK-like) | 184 | 573 | IPR011009 | - | |
Sed14g1271 | 604 | PANTHER | FLIPPASE KINASE 1-RELATED | 78 | 579 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed10g0547 | Sed-Chr10:3536636 | Sed14g1271 | Sed-Chr14:21747693 | 3.20E-271 | dispersed | |
Sed11g1164 | Sed-Chr11:27556452 | Sed14g1271 | Sed-Chr14:21747693 | 2.10E-230 | dispersed | |
Sed14g1271 | Sed-Chr14:21747693 | Sed05g0572 | Sed-Chr5:4171466 | 1.30E-43 | dispersed | |
Sed14g1270 | Sed-Chr14:21747693 | Sed14g1271 | Sed-Chr14:21747693 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80181 | PF00069 | Pkinase | 7.10E-38 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1271 | K08286 | - | csv:101209748 | 1028.08 |