Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1298 ATGTATCACCAATCTGTGCAAATGATGGATCCTTTTTATTTATCTCATTTCAACGTAATGGAAAACAATGTCTCTTCTGATGCAAGCAGTCAGGGGACCATTGTTAACTTTTCTTCCTATAAGGATCAGTTCTTTACTTTGGAATCATTCCCAGCTTCTGCTGATCTGAGTGCCTGTAATTCCCCTTCTGCTGTTAGTGTTCTGTCTTCCAGAAGCCCCTTATCTCCTCAAGGTTCTCAGACGTGGTCTTCGGATCAAAACACATGTGGATCTCCCGTGAGTGGATGCTCGGTATCCGATGATGATAATGAATTGAAGCTCAAGCTGAGGGAATTGGAAATTTCTTTATTGGGGCCTGAATCTGATATTGTGGATAGCTGCTGCTGTTCTTTAAAGGGCAGGGCACATCGAGATGCTTCAGTGGCAAGGTGGAACTGGAATCAAATGGTTGAAATGATCCCTCGGCTAAGTCTTCGGGACACGCTTATCCATTGCGCTCAAGAAATTCATCAGGATGATTTAAATGCAGCAACGACGTTTATGGAGGTTTTAGGGCAGATGGTTTCGGTCTCCGGTGATCCAGCTCAAAGGTTGGGAGCTTACTTGTTGGAAGGGCTTAGAGCAAGGTTGGAACGATCTGGAAGTGCAATATACAAGTCCTTAAAGTGCGAAGAGCCGACAAGCTCTGAACTAATGTCCTATATGTCTACTCTATTCCAGATCTGCCCATACTTCAAATTTGCTTATACTTCTGCAAATGCTTTCATATGGGAGGCCATGATAAATGAACCCGTAATCCACATTATCGATTTTCAGATTGCGCAGGGTAGTCAGTATATACCTCTCATTCAGGAACTTGCCAATCGGCCAGGTGGACGGCCAGTTCTTCTTCGCATTACAGGTCTGGATGATTCCCAATCCGCTCATGCTCGGGGAGGGGGACTTCAAATAGTGGGACAGAAGCTAGCTGAGGTGGCTCAATCAAATGGAATTCCCTTTCAATTTCACGCTGCAGCGATGTCCAGTTGTGAGGTTGAACGCAGTAATCTAGGAACACAACCTGGAGAAGCATTGGCCGTAACCTTTCCATATGTCTTGCACCACATGCCAGACGAGAGCGTGAGCACACAGAACTACCGAGACCGGCTTCTAAGGATGATTAAAAGTCTGTCACCGAAAGTAGTAACGATAGTGGAGCAGGAATCCAACACCAACACATCCCCATTCTTCTCGCGGTTTATAGAGACACTGGATTATTACACTGCCATGTTCGAGTCGATAGACGTGGCGTGTTCAAGAGACGACAAGCACCGAATCAGGACGGAGCAGAACTGCGTGGCGCGAGACATAGTGAACATGGTAGCTTGCGAGGGGTTCGAGAGGGTAGAACGACACGAACTCCATGGGAAGTGGATGATGAGAATGAGAATGGCTGGTTTTAGTCAATATCCAATCAGCTCCTATGTAAGTGGAGCTGTGAAGAATTTGTTGAGGGAGTACAGCAAGAATTACAGGCTCCAAGAAGCTGAAGGGGCTCTCTGTCTTGGCTGGAAAAACAGAGCAATGTCAACCTTCTCTGCATGGAGATGA 1590 46.16 MYHQSVQMMDPFYLSHFNVMENNVSSDASSQGTIVNFSSYKDQFFTLESFPASADLSACNSPSAVSVLSSRSPLSPQGSQTWSSDQNTCGSPVSGCSVSDDDNELKLKLRELEISLLGPESDIVDSCCCSLKGRAHRDASVARWNWNQMVEMIPRLSLRDTLIHCAQEIHQDDLNAATTFMEVLGQMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKSLKCEEPTSSELMSYMSTLFQICPYFKFAYTSANAFIWEAMINEPVIHIIDFQIAQGSQYIPLIQELANRPGGRPVLLRITGLDDSQSAHARGGGLQIVGQKLAEVAQSNGIPFQFHAAAMSSCEVERSNLGTQPGEALAVTFPYVLHHMPDESVSTQNYRDRLLRMIKSLSPKVVTIVEQESNTNTSPFFSRFIETLDYYTAMFESIDVACSRDDKHRIRTEQNCVARDIVNMVACEGFERVERHELHGKWMMRMRMAGFSQYPISSYVSGAVKNLLREYSKNYRLQEAEGALCLGWKNRAMSTFSAWR 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 21901574 21903163 + Sed0027755.1 Sed14g1298 737016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1298 529 Pfam GRAS domain family 158 529 IPR005202 -
Sed14g1298 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 126 528 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Sed14g1298 529 MobiDBLite consensus disorder prediction 70 96 - -
Sed14g1298 529 ProSiteProfiles GRAS family profile. 149 529 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g2939 Sed-Chr8:40146524 Sed14g1298 Sed-Chr14:21901574 5.40E-137 dispersed
Sed10g0564 Sed-Chr10:3639979 Sed14g1298 Sed-Chr14:21901574 8.20E-250 dispersed
Sed13g1411 Sed-Chr13:19473431 Sed14g1298 Sed-Chr14:21901574 6.00E-48 dispersed
Sed10g0563 Sed-Chr10:3639979 Sed14g1298 Sed-Chr14:21901574 8.20E-250 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40635 PF03514 GRAS 1.80E-124 CL0063 Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1298 K27748 - csv:101207883 849.351