Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1314 ATGGCGACCTCATGTTTTGGTTCACTTTGCATTCGTAAATCAAAGAGGCCCTTATCGACCCCCTCCTCGTTAAAATCCCGGATGAATTCTGAAATGGAAACTATGGAAAGGAGGAGATTTGATAGTTTGGAATCTTGGTCGATGATCCTAGAGTCTGAAAATGTGGAAACTTGGGAGACATCAAAGGAGGATCAGGAGGAGTGGACAGCTGATCTATCTCAACTCTTCATCGGTAACAAATTTGCCTCCGGTGCTCACAGTCGGATATACCGTGGAATTTATAAGCAGAGGGCCGTTGCTGTGAAGATGGTGAGAATTCCAAACCAAAAGGAGGAAACAAGAACCAAACTTGAGCAACAGTTCAAGTCTGAAGTCGCCTTGCTTTCTCGTCTCCTTCATCCTAACATAGTTCAGTTCATAGCAGCCTGCAAAAAGCCACCAGTATACTGTATAATTACAGAGTATATGTCACAAGGAACACTACGGATGTATCTTAACAAGAAAGAGCCATATTCACTCTCAACAGAAACAATACTGAGGTTAGCTCTAGACATATCAAGAGGAATGGAATACCTCCATTCCCAAGGAGTAATCCATAGAGACCTCAAACCAAACAACTTGCTTCTAAACGATGAAATGAGAGTAAAAGTTGCAGATTTCGGAACTTCCTGCCTCGAAACACAGTGTAGAGAATCGAAAGGGAACATGGGAACTTACAGATGGATGGCGCCGGAGATGATAAAAGAGAAGCCTTACACTCGCAAAGTTGATGTGTACAGCTTTGGGATTGTTCTGTGGGAGCTCACCACGGCTCTGCTTCCCTTTCAAGGAATGACTCCCGTGCAGGCTGCCTTTGCCGTCGCCGAGAAGAACGAGAGGCCGCCGTTGCCGGCGAGTTGTCAGCCGGCGTTAGCCCACCTGATAAAGCGGTGCTGGGCGGCGAATCCGTCGAAGCGGCCGGATTTCAGCGACATTGTGGTGGCGTTGGAGAAATACGACGAGTGCGTGAAAGAGGGTCTCCCACTTGCGCACCATAGAAGACTGGTAGACCGAAACGCCATTGTTGAACGCTTGAAAGCTTGCGCCTAA 1089 47.2 MATSCFGSLCIRKSKRPLSTPSSLKSRMNSEMETMERRRFDSLESWSMILESENVETWETSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRTKLEQQFKSEVALLSRLLHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKPNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVVALEKYDECVKEGLPLAHHRRLVDRNAIVERLKACA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22010268 22014865 - Sed0027726.1 Sed14g1314 737032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1314 362 ProSiteProfiles Protein kinase domain profile. 75 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1314 362 SUPERFAMILY Protein kinase-like (PK-like) 50 326 IPR011009 -
Sed14g1314 362 Pfam Protein tyrosine and serine/threonine kinase 78 328 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1314 362 Gene3D Transferase(Phosphotransferase) domain 1 158 350 - -
Sed14g1314 362 Gene3D Phosphorylase Kinase; domain 1 64 157 - -
Sed14g1314 362 FunFam Serine/threonine-protein kinase isoform 1 65 157 - -
Sed14g1314 362 PANTHER SERINE-THREONINE PROTEIN KINASE 69 330 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Sed14g1314 362 SMART serkin_6 75 336 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1314 362 FunFam serine/threonine-protein kinase HT1 158 351 - -
Sed14g1314 362 PRINTS Tyrosine kinase catalytic domain signature 237 247 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1314 362 PRINTS Tyrosine kinase catalytic domain signature 191 209 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1314 362 PRINTS Tyrosine kinase catalytic domain signature 153 166 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1314 362 PRINTS Tyrosine kinase catalytic domain signature 300 322 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1314 362 PRINTS Tyrosine kinase catalytic domain signature 256 278 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1314 362 CDD STKc_MAP3K-like 82 326 - -
Sed14g1314 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g2503 Sed-Chr8:37827648 Sed14g1314 Sed-Chr14:22010268 6.30E-110 dispersed
Sed10g0302 Sed-Chr10:1804740 Sed14g1314 Sed-Chr14:22010268 1.40E-91 dispersed
Sed12g2475 Sed-Chr12:34347505 Sed14g1314 Sed-Chr14:22010268 1.50E-58 dispersed
Sed12g2476 Sed-Chr12:34347505 Sed14g1314 Sed-Chr14:22010268 3.80E-46 dispersed
Sed14g1314 Sed-Chr14:22010268 Sed14g1459 Sed-Chr14:23070659 4.80E-89 dispersed
Sed14g1314 Sed-Chr14:22010268 Sed14g1315 Sed-Chr14:22010268 4.10E-165 tandem
Sed10g0574 Sed-Chr10:3747070 Sed14g1314 Sed-Chr14:22010268 2.20E-198 wgd
Sed14g1314 Sed-Chr14:22010268 Sed08g2387 Sed-Chr8:37060217 2.70E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80182 PF07714 PK_Tyr_Ser-Thr 1.50E-67 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1314 - - - 0.0