Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1315 ATGGCGACCTCATGTTTTGGTTCACTTTGCATTCGTAAATCAAAGAGGCCCTTATCGACCCCCTCCTCGTTAAAATCCCGGATGAATTCTGAAATGGAAACTATGGAAAGGAGGAGATTTGATAGTTTGGAATCTTGGTCGATGATCCTAGAGTCTGAAAATGTGGAAACTTGGGAGACATCAAAGGAGGATCAGGAGGAGTGGACAGCTGATCTATCTCAACTCTTCATCGGTAACAAATTTGCCTCCGGTGCTCACAGTCGGATATACCGTGGAATTTATAAGCAGAGGGCCGTTGCTGTGAAGATGGTGAGAATTCCAAACCAAAAGGAGGAAACAAGAACCAAACTTGAGCAACAGTTCAAGTCTGAAGTCGCCTTGCTTTCTCGTCTCCTTCATCCTAACATAGTTCAGTTCATAGCAGCCTGCAAAAAGCCACCAGTATACTGTATAATTACAGAGTATATGTCACAAGGAACACTACGGATGTATCTTAACAAGAAAGAGCCATATTCACTCTCAACAGAAACAATACTGAGGTTAGCTCTAGACATATCAAGAGGAATGGAATACCTCCATTCCCAAGGAGTAATCCATAGAGACCTCAAACCAAACAACTTGCTTCTAAACGATGAAATGAGAGTAAAAGTTGCAGATTTCGGAACTTCCTGCCTCGAAACACAGTGTAGAGAATCGAAAGGGAACATGGGAACTTACAGATGGATGGCGCCGGAGATGATAAAAGAGAAGCCTTACACTCGCAAAGTTGATGTGTACAGCTTTGGGATTGTTCTGTGGGAGCTCACCACGGCTCTGCTTCCCTTTCAAGGAATGACTCCCGTGCAGGCTGCCTTTGCCGTCGCCGAGAAGGTACTAGGGGTGTACAAAAAAACCAATAACCCGAGAGTCTCGGACTATTTGTCTCAAACCGTAAGAATTGGGTCAGGTTATAATTTTCTTTAG 963 43.93 MATSCFGSLCIRKSKRPLSTPSSLKSRMNSEMETMERRRFDSLESWSMILESENVETWETSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRTKLEQQFKSEVALLSRLLHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKPNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVLGVYKKTNNPRVSDYLSQTVRIGSGYNFL 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22010268 22014865 - Sed0027726.2 Sed14g1315 737033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1315 320 ProSiteProfiles Protein kinase domain profile. 75 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1315 320 PANTHER SERINE-THREONINE PROTEIN KINASE 62 289 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Sed14g1315 320 SMART serkin_6 75 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1315 320 PRINTS Tyrosine kinase catalytic domain signature 256 278 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1315 320 PRINTS Tyrosine kinase catalytic domain signature 153 166 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1315 320 PRINTS Tyrosine kinase catalytic domain signature 191 209 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1315 320 PRINTS Tyrosine kinase catalytic domain signature 237 247 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1315 320 Pfam Protein tyrosine and serine/threonine kinase 78 290 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1315 320 CDD STKc_MAP3K-like 82 290 - -
Sed14g1315 320 Gene3D Phosphorylase Kinase; domain 1 64 157 - -
Sed14g1315 320 SUPERFAMILY Protein kinase-like (PK-like) 50 291 IPR011009 -
Sed14g1315 320 FunFam Serine/threonine-protein kinase isoform 1 65 157 - -
Sed14g1315 320 Gene3D Transferase(Phosphotransferase) domain 1 158 312 - -
Sed14g1315 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g2504 Sed-Chr8:37827648 Sed14g1315 Sed-Chr14:22010268 8.60E-94 dispersed
Sed10g0574 Sed-Chr10:3747070 Sed14g1315 Sed-Chr14:22010268 1.00E-155 dispersed
Sed14g1315 Sed-Chr14:22010268 Sed14g1459 Sed-Chr14:23070659 3.20E-76 dispersed
Sed14g1314 Sed-Chr14:22010268 Sed14g1315 Sed-Chr14:22010268 4.10E-165 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80183 PF07714 PK_Tyr_Ser-Thr 5.90E-55 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1315 - - - 0.0