Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1359 ATGTACGATCCGGATATGTTCAATATGCACGATGATATGCTGGATATTACTTTTACTATGTCCGAAAACGAGCTTGATTATGTTAGAGACGAAGATTATGAAGGCAAATCAGGAACAGAAATGTTAGAAGAAGCTTGTGGGAGTGGCAACCAACGCTCTAAGAAGAAACGTTACAATCGCCACACCCAACACCAAATCCAAGAAATGGAATCGTTCTTTAAGGAATATCCTCACCCAGATGACAAGCAGAGAATGGAGCTGGGCCGTGAACTGGGATTGGAGCCATTGCAAGCTCAACATGAACGACACGAAAATGCATTTTTGAAAGCGGATAACGAAAATCTTCGAGCTGAGAACATTCGTTACCGAGAAGCATTCGCTCATTCAAGCTGCCCGAACTGCGGATCATCCTCCACAACCCTTGGAGAAATGTCCTTTGACGACCAACATTTGCGCATTGAAAATTCCCGTTTGCGAGATGAGATCAACCAAATGAGTGTATATGGCCAAAAAAATGCTCCGTACTATCACCGTCCGTCAAATGCTCCGCCGAGATCTCTTGACTTAACCACCACAAATTTCGGCCAACCGCCGGAGCTCGTCGGAGAAATGTACGGCGCCGCCGACTTTCTCCGGTCCATGTCGAGACGTACAGAACCGGAGAAGCCCGCCATCGTGGGGCTGGCCGTTTCCGCCATGGATGAATTGACCCGAGTGGCTCAGGCCGGCGAACCGTTGTGGGTTCGGGCCGGTTCGAAGTCCAGTGAGGTGGTTCTTAATGAAACAGAGTATTTTAGCAGTTTCCGAGGCGGAACCGGAGCAAAACCGTTGGGGTTGAGAACGGAAGCGTCACGAGCTTCGGCCATTGTGTTCATGAACCATATTAAGCTTGTTGATATTTTAATGGATGCTACGCAATGGTCGAATTTGTTCTGTGGGATTGTTTCAAGAGCATCAATTGTGGAAGTTGTTTCTGCTGGACTGCCTGGAAATTGCAACGGGGCCTTGCATTTGATGAGTGCTGAATTCCAAGTCCCATCGCCATTAGTTCCAACTCGAGAAAACTACTTCGTAAGATACTGCAAAAAGCTTAGCGACGGCACATGGGCAGTGGCTGATGTTTCATTGGAAACTTTGCGCCCATCTTCAATTCCAAACACCCGAAGGAGACCCTCTGGCTGTTTAATTCAAGAACTGCCCAATGGATACTCTAAGATCATTTGGGTGGAACATGTAGAAGTGGATGAAACTGGGGTTCCCGCAATGTACAAACCGCTGGTCAATTCGGGACTAGGTTTTGGCGCAAAACGATGGGTGGCTACTCTTGATAGGCAGTGTGAGCGTTTAGCCACTTCCATGGCTACAACCATAGCCACCGGTGAACTACGAGTGATGTCGAGTATTGAAGGGAGGAAGAGTATGTTGAAGTTAGCAGAGAGGATGGTGATAAGCTTTTGTGCCGGCGTCGGAGCGTCGAGCGTACACACTTGGACGGCGTTACCAGCTACCGGCAGTGATGATATCCGGGTTGTGACGAGAAAGAGCACCGATGAACCTGGCCGACCACCTGGTGTTGTGCTGAGCGCTGCCACTTCTTTCTGGATCCCTGTTGCTTCTAAAGTTGTCTTTGATTTCCTTCGCAAAGAGAAATCTCGTAGCGAGTGGGATATTCTGTCGAACGGAGGCTTGGTTCAGGAAATGGCGAACATAGCCAACGGCCGCCACTCTGGGAATTGTGTCTCATTGCTTCGTGTTAATAGTGCTAATTCAAGCCAGAGCAATATGTTGATACTACAAGAGAGTTGCACTGATTCAACGGGATCCTACGTTATTTATGCTCCGGTAGACACCGTTGCGATGAACGTGGTGCTAAGCGGTTGCGACCCGGATTACGTGGCGCTTCTACCGTCGGGATTCGCCATACTCCCCGACGGGCCAGGCGGAGCCAACGACGGAGGGGGGATTTTGGAGCTCGGCTCCGGTGGGTCACTCATCACTGTTGCATTTCAAATTCTGGTTGATTCAGTTCCAACGGCTAGGCTTTCGATTGGATCGGTTGCTACGATTAGCAGTCTTATTAAGTGCACGGTTGAAAGGATTAGAGCTGCAGTTATGCGTGAAAGTCCATGA 2130 49.01 MYDPDMFNMHDDMLDITFTMSENELDYVRDEDYEGKSGTEMLEEACGSGNQRSKKKRYNRHTQHQIQEMESFFKEYPHPDDKQRMELGRELGLEPLQAQHERHENAFLKADNENLRAENIRYREAFAHSSCPNCGSSSTTLGEMSFDDQHLRIENSRLRDEINQMSVYGQKNAPYYHRPSNAPPRSLDLTTTNFGQPPELVGEMYGAADFLRSMSRRTEPEKPAIVGLAVSAMDELTRVAQAGEPLWVRAGSKSSEVVLNETEYFSSFRGGTGAKPLGLRTEASRASAIVFMNHIKLVDILMDATQWSNLFCGIVSRASIVEVVSAGLPGNCNGALHLMSAEFQVPSPLVPTRENYFVRYCKKLSDGTWAVADVSLETLRPSSIPNTRRRPSGCLIQELPNGYSKIIWVEHVEVDETGVPAMYKPLVNSGLGFGAKRWVATLDRQCERLATSMATTIATGELRVMSSIEGRKSMLKLAERMVISFCAGVGASSVHTWTALPATGSDDIRVVTRKSTDEPGRPPGVVLSAATSFWIPVASKVVFDFLRKEKSRSEWDILSNGGLVQEMANIANGRHSGNCVSLLRVNSANSSQSNMLILQESCTDSTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFAILPDGPGGANDGGGILELGSGGSLITVAFQILVDSVPTARLSIGSVATISSLIKCTVERIRAAVMRESP 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22405122 22414439 - Sed0025655.1 Sed14g1359 737077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1359 709 Pfam Homeodomain 55 97 IPR001356 GO:0003677(InterPro)
Sed14g1359 709 SUPERFAMILY Homeodomain-like 42 99 IPR009057 -
Sed14g1359 709 SUPERFAMILY Bet v1-like 470 701 - -
Sed14g1359 709 Coils Coil 98 125 - -
Sed14g1359 709 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 48 704 IPR042160 -
Sed14g1359 709 SMART HOX_1 53 107 IPR001356 GO:0003677(InterPro)
Sed14g1359 709 Gene3D - 273 452 IPR023393 -
Sed14g1359 709 FunFam Homeobox-leucine zipper protein GLABRA 2 227 447 - -
Sed14g1359 709 CDD START_ArGLABRA2_like 222 447 - -
Sed14g1359 709 SMART START_1 227 448 IPR002913 GO:0008289(InterPro)
Sed14g1359 709 Gene3D - 42 124 - -
Sed14g1359 709 Pfam START domain 229 448 IPR002913 GO:0008289(InterPro)
Sed14g1359 709 SUPERFAMILY Bet v1-like 219 449 - -
Sed14g1359 709 ProSiteProfiles START domain profile. 218 451 IPR002913 GO:0008289(InterPro)
Sed14g1359 709 CDD homeodomain 54 97 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g4265 Sed-Chr1:70936895 Sed14g1359 Sed-Chr14:22405122 4.80E-19 dispersed
Sed05g0145 Sed-Chr5:876294 Sed14g1359 Sed-Chr14:22405122 6.80E-18 dispersed
Sed13g0162 Sed-Chr13:1025312 Sed14g1359 Sed-Chr14:22405122 5.30E-154 dispersed
Sed01g1457 Sed-Chr1:10671656 Sed14g1359 Sed-Chr14:22405122 3.10E-244 wgd
Sed10g0620 Sed-Chr10:4136562 Sed14g1359 Sed-Chr14:22405122 0.00E+00 wgd
Sed14g1359 Sed-Chr14:22405122 Sed05g2012 Sed-Chr5:33361764 1.80E-233 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40638 PF01852 START 7.30E-48 CL0209 Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1359 K09338 - csv:101209093 1124.0