Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1367 ATGGAGGTGGGCAGTTTGAATTTGAGAACAATTTATTTCCTTTGCTTTGTTGTTGTTGCACCATTGATGTTTACAACAACTGCCCATCCAGAAGTTTTTTCCTACAAAGGTTCAAACACGGGGAACTCTACCAACCATAGCTCTTTTAAGAAAAATATGTACAATGTACTTGCCTCAATCTCTTTCCCTTCTGTGCGACGGCCACCCTCGCCACCGCCACTCTCGCCACCGCCACCCTCGCCACCGTCACCCTCGCCACCACCACCTGTGCAGCCGCCACCACCACCCTCGCCACCATTTCTGCACTCGCTTTTGCCGCCACCTCGATTCCTGCCTCGGCGAACACCTTGGCCCTCACCTTTTCCACCACCTCGGTTTGGGCCTCGGCCACCACCTCCGCCCTCGGCTTCTAATGTTATCTCTCCATCTTTACTTTCGACACAAGGAAGTAATGACCATAGTGCTACTAGAACTATTATAATTGTTGTGGTAGCCATAGTTTCAGTCATCATTCTCAATGTTGGCATTTGCACCATTTTTATATTGAGGAACATAAAGCACAAAACAACATTACCAAATTTTCAAAATGTTGCTCTTAGTGATTCCACTGATGAAATTAGTAGTGTGGAGAGCATTCAATTTGATTTTGAAACCATTAAAGTTGCAACAAATGACTTCTCTAATGAGAACAAGCTCGGACAGGGTGGATTTGGAGCCGTTTACAAGGGTATGCTACCTAATGGACAACATATTGCAGTGAAGAGGCTTGCTAACAATTCACAACAGGGAGATATTGAATTCAAAAATGAAATTCTTTTGGTCTTTAAGCTTCACCATCGAAACTTGGTTAGGCTGTTGGGATTTTGCTTGCAAGGAAAGGAAAGACTTCTCATATATGAGTTTGTACAAAATGGCAGCCTTGACCACTTCATATTTGTTAACAATTTTTTTAATAACCATGTAGATTTTGCAAAGAGAAAGATATTAGATTGGGATAAACGATACAAAATCATAAATGGTATTGCAAGAGGACTTCTTTATCTTCATGAAGATTCAACTTTTCGAATTATACATCGAGATATCAAAGCTAGCAATATTTTATTAGATGATCAAATGAATCCAAAGATCGCAGATTTTGGTATGGCAAGATTGTTTGAAGTAGATGAGTCTCAAGGGAGTACAAGTAGAATTGTGGGAACTTATGGCTATATGGCTCCCGAATATGTAATGCATGGACAATTTTCGGTAAAATCGGATGTCTTTAGTTTTGGTATTTTAGTTCTTGAAATTTTGAGTGGTCAGAAAAGTAATTCTTTTGGCAATGGAGAAAATATGGAAGATGTCGCAAACTTTGCATGGAAAAATTGGAGAGCAGGAACACCTATAAATGTTATAGATTCAACTCTTCGTGTTGGTTCAAGAATTGAAATGTTAAGGTGCATTCACATTGGACTATTATGTGTTCAAGAACGCGTGGTATATCGACCAACCATGACTTCGGTGGTTATGATGTTAAGTAGTTCTTCTCTCACTCTTCCTATACCTAATAGACCTGCCTTCTTCATGAATAGTACCACCAATGAATCCAACACATCATTCTAA 1602 40.07 MEVGSLNLRTIYFLCFVVVAPLMFTTTAHPEVFSYKGSNTGNSTNHSSFKKNMYNVLASISFPSVRRPPSPPPLSPPPPSPPSPSPPPPVQPPPPPSPPFLHSLLPPPRFLPRRTPWPSPFPPPRFGPRPPPPPSASNVISPSLLSTQGSNDHSATRTIIIVVVAIVSVIILNVGICTIFILRNIKHKTTLPNFQNVALSDSTDEISSVESIQFDFETIKVATNDFSNENKLGQGGFGAVYKGMLPNGQHIAVKRLANNSQQGDIEFKNEILLVFKLHHRNLVRLLGFCLQGKERLLIYEFVQNGSLDHFIFVNNFFNNHVDFAKRKILDWDKRYKIINGIARGLLYLHEDSTFRIIHRDIKASNILLDDQMNPKIADFGMARLFEVDESQGSTSRIVGTYGYMAPEYVMHGQFSVKSDVFSFGILVLEILSGQKSNSFGNGENMEDVANFAWKNWRAGTPINVIDSTLRVGSRIEMLRCIHIGLLCVQERVVYRPTMTSVVMMLSSSSLTLPIPNRPAFFMNSTTNESNTSF 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22489400 22493728 + Sed0023331.1 Sed14g1367 737085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1367 533 Gene3D Phosphorylase Kinase; domain 1 190 301 - -
Sed14g1367 533 FunFam Cysteine-rich receptor-like protein kinase 28 302 513 - -
Sed14g1367 533 ProSiteProfiles Protein kinase domain profile. 226 533 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1367 533 Gene3D Transferase(Phosphotransferase) domain 1 302 512 - -
Sed14g1367 533 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 156 521 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Sed14g1367 533 ProSitePatterns Protein kinases ATP-binding region signature. 232 254 IPR017441 GO:0005524(InterPro)
Sed14g1367 533 MobiDBLite consensus disorder prediction 114 138 - -
Sed14g1367 533 SMART serkin_6 226 486 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1367 533 FunFam Cysteine-rich receptor-like protein kinase 10 188 301 - -
Sed14g1367 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1367 533 SUPERFAMILY Protein kinase-like (PK-like) 214 524 IPR011009 -
Sed14g1367 533 MobiDBLite consensus disorder prediction 114 151 - -
Sed14g1367 533 Pfam Protein tyrosine and serine/threonine kinase 229 457 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1367 533 CDD STKc_IRAK 232 499 - -
Sed14g1367 533 MobiDBLite consensus disorder prediction 65 101 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g1367 Sed-Chr14:22489400 Sed14g1373 Sed-Chr14:22512331 2.40E-161 dispersed
Sed14g1367 Sed-Chr14:22489400 Sed14g1368 Sed-Chr14:22495961 3.40E-160 tandem
Sed10g0626 Sed-Chr10:4209768 Sed14g1367 Sed-Chr14:22489400 9.90E-130 wgd
Sed10g0357 Sed-Chr10:2171455 Sed14g1367 Sed-Chr14:22489400 8.60E-99 wgd
Sed14g1367 Sed-Chr14:22489400 Sed08g2330 Sed-Chr8:36669883 1.60E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80186 PF07714 PK_Tyr_Ser-Thr 1.30E-47 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1367 - - - 0.0