Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1380 ATGATTCATTTACTACTTCTAATTTCAATCTCTGTATTCATAATCCCTTGTCATGGCCAATTACTTGGTTACACGTGTCCAACAGCCACAAACAACACAACCAATCTGGATTTTAATGTTAATTCCCTATTGAGTTCTTTGTCCTCTAAAGCTTCCACCTCCAATTTCTACAACCAAACCTCTAATGGAATCCATGGCCTTTACCTCTGCCGAGGAGACGTTTCTAATGAAGAGTGTAGTACCTGCATCACAAATGCAACTCGACAACTCAAACTCGATTGTCCTTCTCGAACCGACGCCATCATATGGTATGAAAAGTGCATGTTGAGATACTCAAATCTAAACTTCATTGGTACCCTCCAAATGACTAGATTGTTGACAAGGTACAGCCTTGACATAACTTCCCCTGCTGAAACCTCGGAGATTGTTGCTTGGGCGCGCCAGTTAATATCGGATGCTTCGAGCGAAGAGTTGATGTTCAAGGCGACCTCCCTTTTCTTCAATTCGATACCACAAGCTCCACATCCATCTTTGCCAGCATCGGGACCACAAGCTCCCCATCCATTCTTGCCAGCACCAGCCCCGCCTCCGGATGAAGAACGAAACACGGGAGGGAACAAAACAAGGATCATTGTCATTAGTATATCAACCGTTGCAGCTGATATTCATTTCTACGATTTTGATACTCTAAAGACTGCTACACACGACTTTTCAGATGCTAATAAACTTGGAGAAGGCGGGTTTGGTTCAGTTTACAAGGGAAAACTGATAAATGGTGAAGAAATAGCAGTAAAAAGACTATCACAAACAAAATTAAGTCAAGGACTTGAAGAGCTCAAGAATGAAGCAAAGATTATTTTGAAGCTTCAACGTAAGAATCTGGTTAGACTTTTTGGATGTTGTGTTGAAGGAGAAGAAAAACTTTTGGTGTATGAGTACATGGCAAATACTAGTCTTGATACTTTCTTGTTTGATCCATTGAAGTGTAAGCAACTCGACTGGCTCAAGCGCAAAAACATTGTCAATGGAATTGCAAGGGGAATCCTCTACCTCCATGAAGATTCTAGACTCAAAATCATTCATAGAGATTTAAAGGCAAGCAATGTACTGTTAGATGAAGAGATGAATCCAAAAATATCGGACTTTGGAATTGCGAGGATCCTTGGAGGCAAGCAGAATGAGGCCAATACCAAAACAATTGTTGGAACATCCGGTTATATGGCACCAGATTATGCTATGGAAGGAGTATTCTCGATGAAGTCCGATGTATACAGTTTTGGAGTACTTATCCTAGAAGTGGTCAGTGGAAGAAAGAACATTGGTTTTCTGTATATGGACAAAACACAGAACCTTCTGTCATACGCATGGGAGCTATGGAGTGAAGATAGAGCAGAAGAAATAATAGACAACAACTTGGTTGAAGATTGCCCTGTGAGTGAGGCTATTAGATGGATCCACATTGGTTTGTTGTGTGTTCAAGAGGATCCTAACACCCGACCGACCATGTCGATTGTCGTTCTAATGCTTGCAAGCCAGTCGTTTCAGCTTCCTCAGCCATCAAAACCTCTATTTCTTTCAGGCCAAGGGGTTCCTCTTGTATATCAATATTCAATGACTGATACTGAGACAGAGTTACACACCACAGACCAGTCGTCCACCACTGCTTCTATCTAG 1674 41.64 MIHLLLLISISVFIIPCHGQLLGYTCPTATNNTTNLDFNVNSLLSSLSSKASTSNFYNQTSNGIHGLYLCRGDVSNEECSTCITNATRQLKLDCPSRTDAIIWYEKCMLRYSNLNFIGTLQMTRLLTRYSLDITSPAETSEIVAWARQLISDASSEELMFKATSLFFNSIPQAPHPSLPASGPQAPHPFLPAPAPPPDEERNTGGNKTRIIVISISTVAADIHFYDFDTLKTATHDFSDANKLGEGGFGSVYKGKLINGEEIAVKRLSQTKLSQGLEELKNEAKIILKLQRKNLVRLFGCCVEGEEKLLVYEYMANTSLDTFLFDPLKCKQLDWLKRKNIVNGIARGILYLHEDSRLKIIHRDLKASNVLLDEEMNPKISDFGIARILGGKQNEANTKTIVGTSGYMAPDYAMEGVFSMKSDVYSFGVLILEVVSGRKNIGFLYMDKTQNLLSYAWELWSEDRAEEIIDNNLVEDCPVSEAIRWIHIGLLCVQEDPNTRPTMSIVVLMLASQSFQLPQPSKPLFLSGQGVPLVYQYSMTDTETELHTTDQSSTTASI 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22556515 22568905 - Sed0006583.1 Sed14g1380 737098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1380 557 Pfam Protein tyrosine and serine/threonine kinase 241 506 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1380 557 Gene3D - 22 116 IPR038408 -
Sed14g1380 557 SMART serkin_6 237 485 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1380 557 FunFam Os08g0179000 protein 214 313 - -
Sed14g1380 557 MobiDBLite consensus disorder prediction 176 198 - -
Sed14g1380 557 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 57 524 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Sed14g1380 557 SUPERFAMILY Protein kinase-like (PK-like) 221 531 IPR011009 -
Sed14g1380 557 ProSiteProfiles Protein kinase domain profile. 237 524 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1380 557 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524(InterPro)
Sed14g1380 557 FunFam Uncharacterized protein 314 515 - -
Sed14g1380 557 ProSiteProfiles Gnk2-homologous domain profile. 18 116 IPR002902 -
Sed14g1380 557 MobiDBLite consensus disorder prediction 176 204 - -
Sed14g1380 557 Gene3D Transferase(Phosphotransferase) domain 1 314 518 - -
Sed14g1380 557 Gene3D Phosphorylase Kinase; domain 1 203 313 - -
Sed14g1380 557 Pfam Salt stress response/antifungal 26 113 IPR002902 -
Sed14g1380 557 CDD STKc_IRAK 243 509 - -
Sed14g1380 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 359 371 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g1380 Sed-Chr14:22556515 Sed14g1388 Sed-Chr14:22629481 2.40E-100 dispersed
Sed14g1379 Sed-Chr14:22550722 Sed14g1380 Sed-Chr14:22556515 4.30E-205 tandem
Sed14g1380 Sed-Chr14:22556515 Sed14g1381 Sed-Chr14:22572197 2.70E-168 tandem
Sed01g1429 Sed-Chr1:10536147 Sed14g1380 Sed-Chr14:22556515 6.70E-19 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80198 PF07714 PK_Tyr_Ser-Thr 3.70E-48 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1380 - - - 0.0