Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1382 ATGACATTTTTTCTTCCTCTTGTTTTATTTTTCTTTGCCAGAATTTGTTCCACCCAGCCAGTCTTCATCTACCACTTCTGCCTGTATGATAAAGGGAACTTCACAAGCAACAGCACCTATAAAACCAATCTTGACCATGTCCTCTCCTCCATTGCCACTGCCAAACACACCAGCAATGGCTTTTACAATTTTTCATACGGTCAAACCTCGGATTCAGCCAATGCAATTGGACTCTGTCGAGGCGATGTGAAACCTAATGTATGTCAAAGCTGCCTCAATGATTCCATACATCTCCTCACACGGCGATGTCCTCGGCAGAAAGAAGCAATTGGGTGGTATGATAACTGTATGCTGCGCTATTCGAGTCGCGCTATATTTGGTGTAATGGAAACTCAACCCTTGTTCTTAATGTGGGCGACAACTAATGTGATGGAGAAAGTTATGTTTAAGCAGAAGTTAGGAACATTGCTGGATGGCTTGAAAAATAGTGCCTCTTTGAGTGGTTCTAATGATGGTGATATTAGCTCTATTCTCTTGCAATATGACTTCAAGACGGTCAAAGATGCAACAGATGACTTTTCTGCTGCAAATAAACTTGGACAAGGTGGATTTGGTGTCGTTTATAAGGGCAAACTTCTCAATGGACAAGAAGTGGCTGTAAAAAGGTTAGCTCAAGGTTCTCAACAGGGAGACCTAGAATTTAAGAATGAAGTTTTATTGGTTGCTAAGCTGCAACACCGGAATCTGGTTCGACTTCTCGGCTTTTGTTTTGCGAGAAACGAGAGACTCCTTATCTACGAGTTCGTACCAAATTCAAGCCTAGATCGTTTCATATTCGCGCCAGTATTTGGACTGGCCAAGACGTTACAAAATTATACTAGGATTAGTCGTGGCCTCGTTTATCTACACGAAGATTCTCAATTCAAAGTCATTCATCATGATCTTAAACCATCTAATATATTATTAGATGAAGAGTTCAATCCAAAAATTACTGATTTTGGAATGGCAAGATTGTGTTCCTTCAACGAGTCTTATGGTGATACAAGTAAAGTTAAGGGAACATATGGATACATGGCTCCAAAGTATGTAATGTATGGGCATTTCTCGGTGAAATTAGACGTGTTTAGTTTTGGCGTGCTTCTTCTAGAGATCGTGAGTGGTCAAAAGAACAGTTCTATACAAGATGGCGACAACATAGAACATCTATTGAGCTATGCTTGGGAGAACTGGATGAAAGGGACGATCACAAAGATCATAGACCCAATATTGAATGGAGGTTACATGGCTGAAGTCATGAAATGCATTCACATAGGGTTACTATGTGTTCAAGATAATGTAGCGAGCAGACCAACCATGGCTTCAATTGTTCTCATGTTGAGCAGCAATTCCTTCACTCTTCCTGTACCATCACGCCCTGGATTTTTGCTGCATAGTAATTCATCAAACTCTTAA 1452 40.56 MTFFLPLVLFFFARICSTQPVFIYHFCLYDKGNFTSNSTYKTNLDHVLSSIATAKHTSNGFYNFSYGQTSDSANAIGLCRGDVKPNVCQSCLNDSIHLLTRRCPRQKEAIGWYDNCMLRYSSRAIFGVMETQPLFLMWATTNVMEKVMFKQKLGTLLDGLKNSASLSGSNDGDISSILLQYDFKTVKDATDDFSAANKLGQGGFGVVYKGKLLNGQEVAVKRLAQGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFARNERLLIYEFVPNSSLDRFIFAPVFGLAKTLQNYTRISRGLVYLHEDSQFKVIHHDLKPSNILLDEEFNPKITDFGMARLCSFNESYGDTSKVKGTYGYMAPKYVMYGHFSVKLDVFSFGVLLLEIVSGQKNSSIQDGDNIEHLLSYAWENWMKGTITKIIDPILNGGYMAEVMKCIHIGLLCVQDNVASRPTMASIVLMLSSNSFTLPVPSRPGFLLHSNSSNS 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22577228 22580564 + Sed0010045.1 Sed14g1382 737100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1382 483 Gene3D - 20 124 IPR038408 -
Sed14g1382 483 Gene3D Phosphorylase Kinase; domain 1 161 268 - -
Sed14g1382 483 Pfam Salt stress response/antifungal 27 122 IPR002902 -
Sed14g1382 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1382 483 ProSiteProfiles Gnk2-homologous domain profile. 22 125 IPR002902 -
Sed14g1382 483 ProSitePatterns Protein kinases ATP-binding region signature. 199 221 IPR017441 GO:0005524(InterPro)
Sed14g1382 483 SUPERFAMILY Protein kinase-like (PK-like) 175 459 IPR011009 -
Sed14g1382 483 Pfam Protein kinase domain 195 404 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1382 483 FunFam Cysteine-rich receptor-like protein kinase 10 160 268 - -
Sed14g1382 483 ProSiteProfiles Protein kinase domain profile. 193 465 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1382 483 Gene3D Transferase(Phosphotransferase) domain 1 270 465 - -
Sed14g1382 483 FunFam Lectin-domain containing receptor kinase A4.3 269 474 - -
Sed14g1382 483 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 20 125 - -
Sed14g1382 483 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 58 474 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Sed14g1382 483 SMART serkin_6 193 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0357 Sed-Chr10:2171455 Sed14g1382 Sed-Chr14:22577228 6.20E-166 dispersed
Sed14g1382 Sed-Chr14:22577228 Sed01g1442 Sed-Chr1:10588685 2.70E-95 dispersed
Sed14g1381 Sed-Chr14:22572197 Sed14g1382 Sed-Chr14:22577228 3.50E-87 tandem
Sed10g0356 Sed-Chr10:2170148 Sed14g1382 Sed-Chr14:22577228 1.10E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80200 PF00069 Pkinase 2.80E-44 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1382 - - - 0.0