Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1388 ATGGGCACTAATTGCAGAAATATTAATGGGTTTCTTCAATTCTCAATCATCTCGTTCTTCCTCTGTTTTTCCTCTCTGTTTTCTGAAGCTGCAGATTCAATCACAAAGGGCATAGATTTAAGAGACAGAGCAAACCAAACTCTCATATCCAGAAATTCAACCTACGAATTGGGTTTCTTCAGCCCCACAAATTCATCATCACGATACGTTGGAATATGGTATCACAACATCGAAGAACACTCTGTAATTTGGGTAGCAAACAGAGACAAGCCCATTTTAAACAGAGATGGGGTTTTCAAAATCGGCGACGATGGAAACTTGGTCGTTTTAGATGGAAACAATGTCACGATGTGGACTAGCAACATCACAGCGAATTCATCAGATCCCAGAAACTTAACTCTGCACAACAATGGCGAATTGATTCTCAGAAGCGAAAATCTCCATTGGAGCAGCTTCGAAAACCCCACTGACACATTTCTGCCGAATATGGTGGTGCGAGTGAAATCAAATACGCCTGCGAAAAAAATTTTCATGTCGTGGAAATCTGCGACAAATCCTGCCGTTGGAAATTACTGTTTGGGTGTGGATCCACGTGGAGCCGTACAGATCGTGGTTTGGAACGGCGGAAATCGATGGTGGAGGAGCGGCCATTGGGATAAGCAGATTTTCACTGGGATTCCCACAATGCGTTCCACTTCAGCTTATGGATTCGAGGTTCAAAGTGGGAGTGAAATTAGCGTAAAGTTTCATCCGTTTGATGATTCTGATAAGCTGAAATTTCAAATACTTTGGGATGGAAAAGAAGCGCAACAACGATGGAATGAAGCGAATCGAGAATGGGAAACTTTGCGTTTATTACCCTCTAATGATTGCGATCACTATAATTTCTGTGGGGATTTTGGGGTTTGTTCTGAAATTGGTGCTCGAAAGTGCGATTGCGTTCCTGGGTTTAAGCCCAAAAATCAAGAGCGATGGGATAGAGAGATTTGGGGAGATGGGTGTGAGAGAAAAACTCCATTGCTTGAGCAGAGGAAGAACAGTGATCGAAATGGGAGTGTTGTGGATGTTGAGGAAGATGGGTTTATGGTTTTGGAGTTTGTGAAATTGCCTGATTTTATAGGTTCTGTTTCTGTGGATTCTTGTAGTGATAGATGTTTGAGGAATTCTTCTTGTGTTGCTTATTCGGATGCGCCTGGAATTGGGTGTGTAACTTGGGATGGAGCTTTGATGGATATTCAGAAATTTGATGGTGTTGGGAATACTTTGCACGTTCGTGTTGCTCATTCTGATTTGATACTTTTAGATAGCGAACGCAAATTGTCGACCGGTGTGATAGTAGCAATATGTTTAGGAGGAGCTGCTGCCATAGCCGCATTAGCATTGCTGATATGGAAATTCAGAGGCAAAATGAAAGATTCACCAGCTCCTGCTTCCAGTAAAGCTCATAACAACAATGAAGTATCAATGTACGACATGACCAAGAGCAGAGAATTTTCAGCTGAGCTTTCGGGGCAGTACGAATTAGGCCGAGAAGGCGAACAATTGAGTGGACCAGAATTGCCTATGTTCAATTTCAGCTGTATAGCTGTGGCTACTGATAACTTTTCTGAGGAAAACAAGCTCGGCCAGGGAGGTTTCGGTCCAGTATACAAGGGAAAGCTTCCATCTGGATTAGATATTGCGGTGAAGAGGCTCTCGGTCCGGTCTGGTCAAGGTTTAGAAGAGTTTAAGAATGAGATTATACTGATAGGAAGGTTGCAGCATAGAAACCTTGTCAAATTGTTGGGCTATTGCATCCAAGGAGAGGACAAGATGTTGCTTTATGAATATATGCCAAACAAAAGCTTGGATTGGTTTCTTTTTGATCCAAACAGGCAGGCACTACTGGATTGGAAAAGGCGGATGTCAATCATCGAGGGAATTACGCGAGGATTGCTATATCTTCATCGAGACTCGAGACTTCCTATTATTCATAGGGATTTGAAAGCTAGCAACATTTTGCTAGACGAAGACATGAATCCCAAGATATCAGACTTTGGCATGGCTAGAATATTTGGTGGAAACCAAAACGAGGCGACAAATACAGTTCGAGTTGTTGGCACATACGGTTACATGGCTCCCGAGTATGCAATGGAAGGTCTATTTTCGGTGAAATCGGACGTCTATAGTTTTGGTGTTTTATTATTGGAATTAATCTGTGGTAGAAGGAACACTAGCTTTCGCTCAACTGAATACTTAACCCTTATTACCTATGCTTGGAAACTATGGAATGAAGGACGAGCGATTGAACTTCTTGATCCATTGATTCGAGATTCATCCCCCGTGGACGAAGTATTGAAATGCATACATGTAGCAATGTTGTGCGTACAAGACTCGCCAGCATATAGACCAACATTGCAGTCTTTGGTGCTAATGATGGAAAGTGAAACTACTTCTCTACCACAGCCGAGACAACCCACCTATGCTTCGACGAGAGCCTCGCACGATACAGACTTGTTTACAGAAGGCCACGACATAGTATCATCGAACGACCTAACGGTAAGTTCAACTCAAGCAGAAGTAAACGACAGATGA 2574 42.7 MGTNCRNINGFLQFSIISFFLCFSSLFSEAADSITKGIDLRDRANQTLISRNSTYELGFFSPTNSSSRYVGIWYHNIEEHSVIWVANRDKPILNRDGVFKIGDDGNLVVLDGNNVTMWTSNITANSSDPRNLTLHNNGELILRSENLHWSSFENPTDTFLPNMVVRVKSNTPAKKIFMSWKSATNPAVGNYCLGVDPRGAVQIVVWNGGNRWWRSGHWDKQIFTGIPTMRSTSAYGFEVQSGSEISVKFHPFDDSDKLKFQILWDGKEAQQRWNEANREWETLRLLPSNDCDHYNFCGDFGVCSEIGARKCDCVPGFKPKNQERWDREIWGDGCERKTPLLEQRKNSDRNGSVVDVEEDGFMVLEFVKLPDFIGSVSVDSCSDRCLRNSSCVAYSDAPGIGCVTWDGALMDIQKFDGVGNTLHVRVAHSDLILLDSERKLSTGVIVAICLGGAAAIAALALLIWKFRGKMKDSPAPASSKAHNNNEVSMYDMTKSREFSAELSGQYELGREGEQLSGPELPMFNFSCIAVATDNFSEENKLGQGGFGPVYKGKLPSGLDIAVKRLSVRSGQGLEEFKNEIILIGRLQHRNLVKLLGYCIQGEDKMLLYEYMPNKSLDWFLFDPNRQALLDWKRRMSIIEGITRGLLYLHRDSRLPIIHRDLKASNILLDEDMNPKISDFGMARIFGGNQNEATNTVRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLELICGRRNTSFRSTEYLTLITYAWKLWNEGRAIELLDPLIRDSSPVDEVLKCIHVAMLCVQDSPAYRPTLQSLVLMMESETTSLPQPRQPTYASTRASHDTDLFTEGHDIVSSNDLTVSSTQAEVNDR 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22629481 22633729 - Sed0017130.1 Sed14g1388 737106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1388 857 ProSiteProfiles Bulb-type lectin domain profile. 33 155 IPR001480 -
Sed14g1388 857 Gene3D Phosphorylase Kinase; domain 1 505 610 - -
Sed14g1388 857 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 152 - -
Sed14g1388 857 SMART serkin_6 535 806 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1388 857 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 611 814 - -
Sed14g1388 857 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Sed14g1388 857 Pfam D-mannose binding lectin 82 181 IPR001480 -
Sed14g1388 857 CDD PAN_AP_plant 355 427 - -
Sed14g1388 857 Pfam Protein tyrosine and serine/threonine kinase 538 803 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1388 857 SMART ntp_6 356 426 IPR003609 -
Sed14g1388 857 CDD STKc_IRAK 541 807 - -
Sed14g1388 857 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 501 610 - -
Sed14g1388 857 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 819 - -
Sed14g1388 857 Pfam PAN-like domain 357 412 IPR003609 -
Sed14g1388 857 Gene3D - 25 152 IPR036426 -
Sed14g1388 857 ProSiteProfiles PAN/Apple domain profile. 356 427 IPR003609 -
Sed14g1388 857 Gene3D Transferase(Phosphotransferase) domain 1 611 823 - -
Sed14g1388 857 SUPERFAMILY Protein kinase-like (PK-like) 520 830 IPR011009 -
Sed14g1388 857 ProSiteProfiles Protein kinase domain profile. 535 821 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1388 857 SMART blect_4 39 155 IPR001480 -
Sed14g1388 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1388 857 PIRSF SRK 7 853 IPR024171 GO:0004674(InterPro)
Sed14g1388 857 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 218 IPR036426 -
Sed14g1388 857 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544(InterPro)
Sed14g1388 857 CDD B_lectin 45 155 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g2320 Sed-Chr8:36568122 Sed14g1388 Sed-Chr14:22629481 5.80E-191 dispersed
Sed14g1380 Sed-Chr14:22556515 Sed14g1388 Sed-Chr14:22629481 2.40E-100 dispersed
Sed14g1381 Sed-Chr14:22572197 Sed14g1388 Sed-Chr14:22629481 1.00E-105 dispersed
Sed14g1388 Sed-Chr14:22629481 Sed14g1390 Sed-Chr14:22630549 0.00E+00 dispersed
Sed14g1388 Sed-Chr14:22629481 Sed14g1389 Sed-Chr14:22629481 0.00E+00 tandem
Sed01g2040 Sed-Chr1:15263826 Sed14g1388 Sed-Chr14:22629481 8.50E-166 wgd
Sed10g0345 Sed-Chr10:2118971 Sed14g1388 Sed-Chr14:22629481 0.00E+00 wgd
Sed14g1388 Sed-Chr14:22629481 Sed04g3313 Sed-Chr4:43400275 3.10E-163 wgd
Sed14g1388 Sed-Chr14:22629481 Sed08g2318 Sed-Chr8:36558153 2.10E-183 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80201 PF07714 PK_Tyr_Ser-Thr 4.60E-45 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1388 - - - 0.0