Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1427 ATGGGGTTTGCAAATTGGAATTTGTTCATGAAGATCCTAATTGGGCTGTTCTTGGTTTTCATCAACCCGTTTTGCTTTGGAGAAACGGACCTTCGTGATGTTGCTGCAATCAATGCATTGTTTATTTCTCTTGGCTACCCACCTTTGAGAGGATGGATTCTTGTGGGAGGGGATCCATGTGGAGAGAAATGGCAAGGGGTTGAGTGTGTATTCACAAATATAACAGCTATACAACTTAGTGGTTTGAATTTGGGAGGAGAGCTAGGCACTAGCTTGGACCAATTTGAGTCAATAATATCCATAGATCTTAGCAACAATCACATTGGAGGGAATATTCCATCTACATTGCCCGCTACACTAAGAAGTTTCTCATTATCAGCTAATCAATTAACTGGAAGCATTCCCTCTGCTTTGGCCACACTAACACAATTGATGGTCTTGTCATTAAACAATAACCTTCTTACTGGGGTAATACCAGATGTCTTCCAGCTGCTTAATGGCTTGAATAACTTGGACTTGTCTGGCAACAACTTGAGCGGCCAGTTGCCTCCCTCGGTGGCCGATTTGCTCTCCCTTGCTACATTGCACTTGCAGAACAATCATCTTTCTGGGATGCTTGATGCTCTACAAGATCTTCCATTGTCGGATTTGAATATAGAGAACAACCTATTTTCTGGGCCTATACCTGCTAAGTTGTTGGGCATTCCAAATTTCAGAAAAGATGGGAACCCTTTTAATACTTCGATTATTCCATCTGCACCTGCTTTAGCCCCTTCACCATTTGCTGTGGCGCCAGTTACTATTGGAAAACCAACCAGACAGACAGGTGCGGGCCAGCCATTGTCGTCGGGGACTCCTGAAATGGAGGGAGGAAAGAGTTTCTTTTCTGCTAAGCACATCATTTGGATTGTTATTATTGGCGCAATAATATTAGTTGCATTAGGATTATGCATTCTTGTGTCGTTATGCTCGAAAAGAAGAAAGCATCGTAAAGATACCAATATGGTTCGTCACAATGCTGATATGGCTTCTGAATCTAAGCCTAAGCCCATGAGGCCCTCGGTTGACGTTGATGACGTGGAGAAAGGTCCAAGGGAGGTCACTCTTAAGCCACTTGATAGAGACAGAATGATGGATAGAAAAATGGATTTTACCACCCCAAGGCCTGTAGATAGACAGGACACAAATGGGAATAGAAATGATGCCTATACTACGAGTTTTCGTAAAGACCATGCGGAGAGTTCAAGCATAAGCATGGATGGCGAAGAATTCCTTGCACCGCCTCCTCCGCCTCCTTTTTTCCTCTCTTCAACTCAGGAGATTGCAAAACCAATTGTGGCAGCTGAAGGACCCAGTAGAGTACCTAAAAACCTGAACACAAGTTCTTTAAAAGTTTTCACAATCGCCTCACTTCAGCAGTATACTAATAGTTTTTCTCAAGATAATCTTCTTGGGAGAGGCATGCTTGGCAGTGTCTATAGAGCTGAGCATTCAAGTGGAAGGCTTTTGGCTGTTAAAAAGCTGGATAGACCCTCTTCAACCCGTTGGAGCGACGATGAATTTCACAACCTTGTGTCTAATATATGCGAAATTCGACACGATAACATCGTGGAGCTTGTGGGCTATTGTGTTGAGCATGGACAATATCTACTCATTTATGAGTATTGCAAAAATGGCACTCTCTATGATGCACTCCATGTTGACTATGAGATGAATCGGAAGCTTTCATGGAATGTACGCGTGAGGATTGCACTTGGAGTTGCACGAGCCCTCGAGTATCTTCATGAGGCCTGTCAACCACCTATTATGCACCAGAATTTTAAGTCTGCTAACATTCTATTGGACAATGCGCTAAAAGCGCAGGTCTCCGACTCTGGCTTAGGTTTTCTGCTTTCTTCAGCTAGTCAGTCATCTGCAAATTTCCTCCCAGCTCTTGGTTATAGTGCTCCTGAACTCGAGTCGGGAACTTACACCTACCAAAGTGATATCTTTAGCTTTGGAGTCATAATGCTAGAGCTTCTCACTGGTCGGAAAGCGTGTGACCGATCACTACCTAGAGGAGAGCAATTTCTTGTTCGTTGGGCGGTTCCAAGGCTCCATGATATCGATGCGTTATCAAGAATGGTCGATCCATCGCTTAATGGGACGTATCCCATTAAGTCATTATCGCGCTTTGCTGATATTATTTCCTCTTGTATAATGAGAGAGCCCGAATTTCGGCCCCCGATCTCGGAAATAGTACAGAAACTCTTACAAATGCTGTAG 2265 43.66 MGFANWNLFMKILIGLFLVFINPFCFGETDLRDVAAINALFISLGYPPLRGWILVGGDPCGEKWQGVECVFTNITAIQLSGLNLGGELGTSLDQFESIISIDLSNNHIGGNIPSTLPATLRSFSLSANQLTGSIPSALATLTQLMVLSLNNNLLTGVIPDVFQLLNGLNNLDLSGNNLSGQLPPSVADLLSLATLHLQNNHLSGMLDALQDLPLSDLNIENNLFSGPIPAKLLGIPNFRKDGNPFNTSIIPSAPALAPSPFAVAPVTIGKPTRQTGAGQPLSSGTPEMEGGKSFFSAKHIIWIVIIGAIILVALGLCILVSLCSKRRKHRKDTNMVRHNADMASESKPKPMRPSVDVDDVEKGPREVTLKPLDRDRMMDRKMDFTTPRPVDRQDTNGNRNDAYTTSFRKDHAESSSISMDGEEFLAPPPPPPFFLSSTQEIAKPIVAAEGPSRVPKNLNTSSLKVFTIASLQQYTNSFSQDNLLGRGMLGSVYRAEHSSGRLLAVKKLDRPSSTRWSDDEFHNLVSNICEIRHDNIVELVGYCVEHGQYLLIYEYCKNGTLYDALHVDYEMNRKLSWNVRVRIALGVARALEYLHEACQPPIMHQNFKSANILLDNALKAQVSDSGLGFLLSSASQSSANFLPALGYSAPELESGTYTYQSDIFSFGVIMLELLTGRKACDRSLPRGEQFLVRWAVPRLHDIDALSRMVDPSLNGTYPIKSLSRFADIISSCIMREPEFRPPISEIVQKLLQML 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 22856936 22862060 - Sed0020747.1 Sed14g1427 737145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1427 754 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 556 754 - -
Sed14g1427 754 MobiDBLite consensus disorder prediction 389 403 - -
Sed14g1427 754 Gene3D Ribonuclease Inhibitor 39 254 IPR032675 -
Sed14g1427 754 MobiDBLite consensus disorder prediction 384 403 - -
Sed14g1427 754 Pfam Protein kinase domain 479 749 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1427 754 Gene3D Transferase(Phosphotransferase) domain 1 556 754 - -
Sed14g1427 754 Pfam Leucine Rich Repeat 98 116 IPR001611 GO:0005515(InterPro)
Sed14g1427 754 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 447 555 - -
Sed14g1427 754 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 256 - -
Sed14g1427 754 SUPERFAMILY Protein kinase-like (PK-like) 456 750 IPR011009 -
Sed14g1427 754 SUPERFAMILY L domain-like 33 237 - -
Sed14g1427 754 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515(InterPro)
Sed14g1427 754 PANTHER LEUCINE RICH REPEAT KINASE 2 71 752 IPR051420 -
Sed14g1427 754 Gene3D Phosphorylase Kinase; domain 1 446 555 - -
Sed14g1427 754 MobiDBLite consensus disorder prediction 340 363 - -
Sed14g1427 754 ProSiteProfiles Protein kinase domain profile. 478 754 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g1968 Sed-Chr5:32996184 Sed14g1427 Sed-Chr14:22856936 9.80E-148 dispersed
Sed11g1725 Sed-Chr11:32358988 Sed14g1427 Sed-Chr14:22856936 2.00E-93 dispersed
Sed14g1427 Sed-Chr14:22856936 Sed09g0440 Sed-Chr9:4368837 3.50E-57 dispersed
Sed14g1427 Sed-Chr14:22856936 Sed14g1428 Sed-Chr14:22856936 0.00E+00 tandem
Sed14g1427 Sed-Chr14:22856936 Sed04g3333 Sed-Chr4:43547355 1.60E-158 wgd
Sed14g1427 Sed-Chr14:22856936 Sed05g1967 Sed-Chr5:32996184 9.50E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80204 PF07714 PK_Tyr_Ser-Thr 3.50E-37 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1427 - - - 0.0