Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1459 ATGGATGAAGAGGCTAATTCTTGGCTTAGGAGGACCAAGTTTTCTCAAACTGTTTATCAGAGATGGGATTCATCTAGACTGAGCCTTGCTCCTCTCATCGTCGACCCACCTCGAAATTCCGGCTCGAAATCGAGATCCCAATCGAGTTCATCCGAGCAGAAACAGAAACCAAATCCTGATATTTTGAAGATCCATAAAAGTTTCATAGCTAACAAACAAAGGTCTCTGTCTCCTCTTCCTGAGAGAAACCTTTCTGAAGTTTTCAAGGAAGCTAAATCCGAGAGTAAGAGATTTTCAACTCCAACTCCTCAACGTAGAGAAAGAACAAAGGATTTCAAGAACAAGGATCCTCAAGATTCTAAATCTTCCAATGGGAGTGGTAAGTCAAAGTTGAAGAAGGATTCATCCTGGACTAAATACTTCGATTCCAGTGGTGGACGAGTCACCGCGGTCGAATCGGCCGATGATTGGAGTGTGGACCTCTCTGAGTTGTTGATTGGATTAAGGTTTGCTCATGGAGCTCATAGTCGTCTTTATCATGGAAAATACAAGGATGAACCTGTTGCTGTTAAGCTTATTCGAGTGCCCGAAGACGACGAAAATGGAATGCTTGCTTCTCGATTGGAGAAGCAATTCACCAGAGAAGTTACTCTTTTATCTCGTCTTCGTCATCCGAATGTTTTAAAATTTGTAGCTGCAAGTAGGAATCCACCAGTTTACTGTGTCATTACTGAATATTTGTCACAAGGATCATTAAGGGGATACTTGCTCAAACTTGATCATCAATCTCTTCCTTTGAAAAAACTGATTGCATTCGCTTTAGATGTCGCTCGTGGCATGGATTACATTCACTCGCAAGGCGTAATTCATCGGGATCTTAAGCCTGAGAATGTTCTTATTGATGAGGACTTCCACTTGAAAGTTGCAGATTTTGGCATAGCTTGTCCGGAGGCCTTTTTCGACCCGTTGGCTGATGATCCTGGAACTTATCGATGGATGGCACCGGAGATGATCAAACATAAGCCCTACGGTCGAAAGGTCGATGTGTACAGCTTTGGGCTTATGTTGTGGGAAATGGTGGCTGGTGCTATTCCTTATGAGGATATGACTCCCATTCAAGCTGCTTTTGCTGTTGTGAATAAGAATGCTAGGCCTATTATCTCAAGTGATTGTCCATTGGCAATGCGAGCTTTGATCGAGCAATGTTGGTCGTTAAATCCAGAGAAGAGACCCGATTTCTGGCAGGTTGTTAAGGTATTAGAGCAATTCGAGTCTTCGCTAGCTCGTGACGGAACACTGAATTTGGTAGGGAACCCTCTGTCTAGCTTCCAAGACCATAAGAAAGGGCTCCGCCATTGGATTCAAAAGCTTGGCCCTCTGCATCCTGAAGCCTCATTTGTACCCAAACCCAAATTCTCATAA 1422 43.53 MDEEANSWLRRTKFSQTVYQRWDSSRLSLAPLIVDPPRNSGSKSRSQSSSSEQKQKPNPDILKIHKSFIANKQRSLSPLPERNLSEVFKEAKSESKRFSTPTPQRRERTKDFKNKDPQDSKSSNGSGKSKLKKDSSWTKYFDSSGGRVTAVESADDWSVDLSELLIGLRFAHGAHSRLYHGKYKDEPVAVKLIRVPEDDENGMLASRLEKQFTREVTLLSRLRHPNVLKFVAASRNPPVYCVITEYLSQGSLRGYLLKLDHQSLPLKKLIAFALDVARGMDYIHSQGVIHRDLKPENVLIDEDFHLKVADFGIACPEAFFDPLADDPGTYRWMAPEMIKHKPYGRKVDVYSFGLMLWEMVAGAIPYEDMTPIQAAFAVVNKNARPIISSDCPLAMRALIEQCWSLNPEKRPDFWQVVKVLEQFESSLARDGTLNLVGNPLSSFQDHKKGLRHWIQKLGPLHPEASFVPKPKFS 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23070659 23073448 - Sed0022771.1 Sed14g1459 737177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1459 473 MobiDBLite consensus disorder prediction 88 118 - -
Sed14g1459 473 Pfam Protein tyrosine and serine/threonine kinase 171 420 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 SUPERFAMILY Protein kinase-like (PK-like) 144 420 IPR011009 -
Sed14g1459 473 FunFam serine/threonine-protein kinase HT1 249 439 - -
Sed14g1459 473 MobiDBLite consensus disorder prediction 39 57 - -
Sed14g1459 473 SMART serkin_6 164 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 MobiDBLite consensus disorder prediction 88 135 - -
Sed14g1459 473 Gene3D Phosphorylase Kinase; domain 1 152 248 - -
Sed14g1459 473 PRINTS Tyrosine kinase catalytic domain signature 244 257 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 PRINTS Tyrosine kinase catalytic domain signature 347 369 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 PRINTS Tyrosine kinase catalytic domain signature 328 338 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 PRINTS Tyrosine kinase catalytic domain signature 391 413 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 PRINTS Tyrosine kinase catalytic domain signature 282 300 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 FunFam Kinase suppressor of Ras 1 153 247 - -
Sed14g1459 473 Gene3D Transferase(Phosphotransferase) domain 1 249 446 - -
Sed14g1459 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 ProSiteProfiles Protein kinase domain profile. 164 424 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1459 473 CDD STKc_MAP3K-like 171 420 - -
Sed14g1459 473 MobiDBLite consensus disorder prediction 28 61 - -
Sed14g1459 473 PANTHER SERINE-THREONINE PROTEIN KINASE 48 422 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed12g1881 Sed-Chr12:30004010 Sed14g1459 Sed-Chr14:23070659 2.20E-52 dispersed
Sed14g1314 Sed-Chr14:22010268 Sed14g1459 Sed-Chr14:23070659 4.80E-89 dispersed
Sed14g1315 Sed-Chr14:22010268 Sed14g1459 Sed-Chr14:23070659 3.20E-76 dispersed
Sed14g1459 Sed-Chr14:23070659 Sed13g1530 Sed-Chr13:20455131 2.00E-42 dispersed
Sed03g2760 Sed-Chr3:44050777 Sed14g1459 Sed-Chr14:23070659 7.40E-78 transposed
Sed01g2111 Sed-Chr1:15831979 Sed14g1459 Sed-Chr14:23070659 4.00E-155 wgd
Sed10g0302 Sed-Chr10:1804740 Sed14g1459 Sed-Chr14:23070659 4.10E-224 wgd
Sed14g1459 Sed-Chr14:23070659 Sed08g2263 Sed-Chr8:36241638 4.70E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80206 PF07714 PK_Tyr_Ser-Thr 6.10E-57 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1459 - - - 0.0