Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1489 ATGGAAACTGGTGCTTCGGACGATGAAAATCTCAATCGGAATGACGATAATATCAACAAAATTAGTAACTCAAGTGAAGGTTTTAGCAAGCCCAAGCGCCAGATGAAGACTCCGTTTCAGCTTGAAACCCTCGAGAAAGCCTTTGCTATGGAGGCGTACCCAACAGAGGCGACGAGGGCTGAACTGTCTGTGAAATTGGGGCTTACTGATCGGCAATTGCAGATGTGGTTCTGTCACAGGAGGTTGAAGGACAAGAAGGCGCCGACACCGGTACCGGCCAAGCCGAAGTTGGTACCGGCGTTGCCTGATTCTCCCCCCATTGATGAATTGAGAGTGGTGGCGGAGCCGGGTAGTGATTATGCTTCGGGGTCGGGCTCGGGTTCGAGTCCGTTCGGGGATGCTGGGTTGCGTAATGTGGGACCTAGAAGTGGTGGAGAAGATATGCCAATGATGAGAAGGTATTATGAACCTTCAAGGTCTGTTATGGAACTTAGAGCTATTGCTTGTGTGGAGTCTCAGTTAGGCGAGCCAGTGAGGGAGGATGGACCTATCCTTGGGATTGAATTTGATCCATTGCCACCTGATGCTTTCGGAACACCTATAGTGGCAGAACAGCAGAAACGATCTGGGCATTCATATGGGGACAAATATGAACATAGGGATGCAAAATCAAATAAAGCGAGTGCAAGGGCATTCCTCGAATATCCATTTATGCCAGACCAGTCTAATATTAGAGCTGATGTGTATGGACCAGTTGCCCAATCGCATTATCCAAATTCATTAGTTGAGGTTTCAGCAGCCAGGACACCATCATTTTTGCTTGGTCATGAACAGTTGAACAGGAGTCACAATTACCATGGCCAGGTTTCAAGAATTCGTCATTTGCCTCAACAGGAGAAGCAGGGAGTTGCAATGTCATCTCCTGCTGAAGATAACGCATTTGTTCCTGCTAGGGATTCTTTTACTAGTATTAGAGCAAATTCTCAATTTACTGATCACCCAATTGTTCGACAAGAAAACGCATATGTGTTGCCAGATGGGAATGTTTATCCTAACGATGTTGGGATTAGGATGGAAAGGAAACACAAGAATGAAGAAGTTCGAATGAACAAAGAAGTTGAAACCCATGAAACAAGAATGCGGAAAGAGCTTGAGAAACAAGATAATTTGAGGAAAAAGAATGAAGAACGAATGAGGAAAGAAATGGAAAAGCAAGATCGTGAAAGAAGGAAAGAAGAGGAGAAGTTAATGCGAGAAAAGCAGCGGGAAGCGGAGAGATTGAAGCGTGAGGAAAGACGTGAACATGAACGAAGGGAGAAGTTTCTGCAGAGGGAGTATTTGAGGGCTGAGAAGAGGAAGCAGAAAGAAGCTATGCGCAAAGAAAAGGAAGCATTAAGACGCAAAGCTGCTATTGAGAAGGCTACTGCTCGTAGAATTGCCCGCGAGTCTATGGAGCTTATTGAGGATGAACAACTTGAATTAATGGAATTGGCAGCTGCAAACAAAGGATTATCCTCCATATTAAATCTTGATCATGACACTTTGCAGAATCTTGAATCTTTCCAAGATTATTTAGGTGCATTTCCACCCAAGTCTGTGCAATTGAAAAAACCTTTCAGCATTCAGCCTTGGATCAATTCAGCGGAAAACATTGGTAACCTTCTCATGGTCTGGAGATTTTTTATTACATTTTCTGATGTGCTAGAGCTATGGCCATTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGACTATGATTCAAGATTATTAGGTGAGATTCACGTTTGTCTTTTGAGACTGATTGTAAAAGATATTGAAGATGTTGCAAGAACACCTGCTGCTGGATTGGGAATGAATCAGAATGGCGTTGCCAACGCTGGAGGTGGTCATCCGCAGATTGTTGAAGGAGCATATGCATGGGGGTTTGACATTTGCAACTGGCAGAAACATTTAAACCCATTAACATGGCCAGAAATATTTCGACAATTAGCACTTTCAGCTGGATTTGGACCTCAGTTGAAGAATAGGAGTTTGGCATGGTCTGAAACGCGTAGCAATGATGAGGCAAAATGTGGCGAGGATGTAGTTTCTACTCTTCGTAATGGTTCAGCAGCTGAAAATGCATTTGCTGTCATGCAAGAGAAAGGATTGTTAGCTCCTCGAAGATCTAGACATCGGCTAACTCCTGGAACTGTCAAGTTTTCTGCTTTTCATGTTCTTTCACTAGAAGGCAGTGAGGGGTTAACAGTACTAGAGCTTGCTGAGAAGATACAGAGGTCTGGACTTCGAGATCTGTCTACAAGCAAAACACCAGAGGCATCCATTTCTGTTGCTTTGACAAGGGATACTAAGCTATTTGAAAGAATAGCTCCTTCCACATATCGTGTACGAGCCCCCTACTGGAAAGATCCAGAGAATGCCGAGGAAATACTTTCAGTAGCCAGAAAGAAAATTCAGGTATTCCAGAATGGGTTTTTGACTGGAGAAGATGCTGATGATGTTGAAAGAGACGAAGAATTTGAATGTGATGATGTTGATGATCTTGAAGTTGATGATGTAGCAACGACATCTTTGGTGAACGAAGATGTTAGCAAAGGAGATATTAACTTGGGTGTTGAGAACGAGAACTTATGTCTTGATAGTACTGGAAATCCACAAAATGAAATTGGCAAAGATATACTGTTCCCCCTCGGTGGTTCCAAGGGCACTAACAATTTAATACCTACAAAACAGTTTGCTGTTGTCGATGAGACTGCTATTAGTGATCTTGATCAAGAAAATATGGAGATTGATGAAAGCAGGGAAGGTGAATCATGGATTCAAGGACTTACAGAAGGTGAATATAATGATCTTAGTGTTGAGGAGCGCCTTGATGCTCTTATTGTCTTAACCAGCATTGCAAATGAAGGAAACTCAATTCGCCTTGTTCTTGAGGATCGCTTGGAAGCTGCAAATGCTGTTAAGAAGCAAATGTTGGCAGAGGCTCAGATTGATAAATCTCGCCTAAAAGAAGAAATCATTACTAAATCTGATTTTCCAATTCACATAGGGAGCAAGGTGGAAACTGAATTCAATGGTTATGCTTTGGAAGGTGGCCAAAGCCCATTACCCGTTGTTTACAATAAGAACAATGAAACGACCCCAAGCACGGCAGAAAACCTCGGTAGTGTGCCTAATGAGAGGGCTACTTTATTGCCAGATCTTTTCCCAGGCCCAGATAACTTTTTGACTCAGCAATGTGGACATGCTTCAAAGAGGTCACGTTTACAGTTAAAATCTTACATTGCTCATAGATCTGAAGAAATGTACACATACAGGTCCTTGCCTCTTGGTCGAGATCGCAGGCGTAATCGATATTGGCAATTTGTTACATCTTCTTCAAGCAATGATCCTGGTTCTGGGAGAATCTTTGTTGAAATGTATGATGGAAAATGGAGGCTTATTGATTCTGAAGAGGGCTTTGATGCTCTTTCAATGGCCTTGGACACCCGTGGGATTAGAGAATCACACCTTCGAATAATGTTGCAGATGATAGAGTCATCATTTAAGGAAAATGTTCGGAGGAATCTGCAGTCTGCCAATGCGATGCTTCAAAGTCGAATTACTTTTAAAAATGAAAATGATGAATCAAGTTCTAGTCCTGACTGTAACGCCAGTTTTAACAGTCCTAGCAGTACTGTTTGCGGTTTAAATTTGGACACAGTTGTTACATCATCTTCATTCAAAATTGAGCTTGGGAGAAATGAAAATGAAAAGATGGCTGCATTTAGAAGGTACCAAGACTTGCAGAGGTGGATGTTAAGAGAGTGCTTTAGCACTTCAACGCTATGGGCCATGAAATTTGGAGAAAAAAGATGCACACCGCTGTTGGGCATTTGTGATTCTTGCTTGTGCTTGTTTGATTCTCAACATTCTCACTGCTCTTCATGCCATCAAAATTTTGGCGCTAGTGGGAACGATATTATTTTTCTGGAACATAAACGTCACTGTGAGAGGGAAAGGAAGTCTAACTACTGGGATACACACGCTTTAGATGCATCTCTTCCCCTTAAATGTAGATTGCTGAAGGCCCTATTAGCTTTCATCGAGGTACATGTTCCATCAGAAGCTTTTCAATTGTTTTGGTCAGAAGAACATAGGAGAGATTGGGGTGTCAGGATGAAATTATCATCATCTATTGAGGAGCTTCTACAGACGTTGACCCTGTTTGAAAGTGCAATTAAGCGAGACTTCCTAAAATCAGACTTTACAACAACAGACGAGCACCTGCGCTCATGTTCCATCTCTGGGAGTGTTACACATGACGCAGCGGATATCGGGTCTGTTCCTACATTACCATGGATTCCACGGACTAGCGCAGCTGTTGCTTTAAGGATTTGTGAGATAGATGCATCAATTTATTATATCGGGTGTGAGAAACCAGAACCTGGCCAGGATAAGGAAATCAGAGGACATATTAACTATCCCAGTAGATATGCCCAGGTTAAGAACGATGAACAGACGAAACTAAACGAACTGGACTATGATGATCTGATGAAAAAAGAAAACTTGGCTGACCCAAAAAGTTCAAGGACCAGCTACAAACGTGGTCGAGGGAATCTGGATTATGGACGTCGTAGAAGGTGGCCGAAAAAAGTTAATGGTTCTACTAAATCTAGCCGTGCACGTCCAAATATCAAGTATAATGAGAAGATGAATCAAGGACCGAGGGAACTGGAGCAAGGAACACAGGTTATGGGGGTACGGGGTCGCCGCACATTGAGGAAGAGAAGGGCTGAGAAGGGCATTCTAGATGAAGGGTTGTTGGGGCTAGGGCCTAGTAGTAGTACTCAGAATGTAGATGAATCTCCAAAAGATTATATTGAGGAATGGGATGATGAAAAAGTGGATAGGTTCATGGATATGGAAGACGAGAATATGTTGGAAGACGAAGAGAACGGCATGGAAGATTACGATAATGAAGAGAACATAAACAATGTACAACCAATGGACTCCGACGAGGATGGCCATGGAGTCGGGTATGCGCAAGGGAATTGGGAGTATGGTATTGATGATGGCACCTCCAACAGATGGAATAATGGTGATGTAGGGATGGCTAGCGACGAAGATGTGGATTTATCTGAGGACTACAATGGAACTGAAGAGGGTGGAAACGATGATATGGAGGAAGAGTTAGATGCCGATACCAGTGAAGACTCGGATTGTTCGCCAAATAGGATAGTCAACAATGGTGGAGGAGAATCCGCCGTTTCCGACGATTATAGCGATTAA 5271 42.86 METGASDDENLNRNDDNINKISNSSEGFSKPKRQMKTPFQLETLEKAFAMEAYPTEATRAELSVKLGLTDRQLQMWFCHRRLKDKKAPTPVPAKPKLVPALPDSPPIDELRVVAEPGSDYASGSGSGSSPFGDAGLRNVGPRSGGEDMPMMRRYYEPSRSVMELRAIACVESQLGEPVREDGPILGIEFDPLPPDAFGTPIVAEQQKRSGHSYGDKYEHRDAKSNKASARAFLEYPFMPDQSNIRADVYGPVAQSHYPNSLVEVSAARTPSFLLGHEQLNRSHNYHGQVSRIRHLPQQEKQGVAMSSPAEDNAFVPARDSFTSIRANSQFTDHPIVRQENAYVLPDGNVYPNDVGIRMERKHKNEEVRMNKEVETHETRMRKELEKQDNLRKKNEERMRKEMEKQDRERRKEEEKLMREKQREAERLKREERREHERREKFLQREYLRAEKRKQKEAMRKEKEALRRKAAIEKATARRIARESMELIEDEQLELMELAAANKGLSSILNLDHDTLQNLESFQDYLGAFPPKSVQLKKPFSIQPWINSAENIGNLLMVWRFFITFSDVLELWPFTLDEFVQALHDYDSRLLGEIHVCLLRLIVKDIEDVARTPAAGLGMNQNGVANAGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGFGPQLKNRSLAWSETRSNDEAKCGEDVVSTLRNGSAAENAFAVMQEKGLLAPRRSRHRLTPGTVKFSAFHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYWKDPENAEEILSVARKKIQVFQNGFLTGEDADDVERDEEFECDDVDDLEVDDVATTSLVNEDVSKGDINLGVENENLCLDSTGNPQNEIGKDILFPLGGSKGTNNLIPTKQFAVVDETAISDLDQENMEIDESREGESWIQGLTEGEYNDLSVEERLDALIVLTSIANEGNSIRLVLEDRLEAANAVKKQMLAEAQIDKSRLKEEIITKSDFPIHIGSKVETEFNGYALEGGQSPLPVVYNKNNETTPSTAENLGSVPNERATLLPDLFPGPDNFLTQQCGHASKRSRLQLKSYIAHRSEEMYTYRSLPLGRDRRRNRYWQFVTSSSSNDPGSGRIFVEMYDGKWRLIDSEEGFDALSMALDTRGIRESHLRIMLQMIESSFKENVRRNLQSANAMLQSRITFKNENDESSSSPDCNASFNSPSSTVCGLNLDTVVTSSSFKIELGRNENEKMAAFRRYQDLQRWMLRECFSTSTLWAMKFGEKRCTPLLGICDSCLCLFDSQHSHCSSCHQNFGASGNDIIFLEHKRHCERERKSNYWDTHALDASLPLKCRLLKALLAFIEVHVPSEAFQLFWSEEHRRDWGVRMKLSSSIEELLQTLTLFESAIKRDFLKSDFTTTDEHLRSCSISGSVTHDAADIGSVPTLPWIPRTSAAVALRICEIDASIYYIGCEKPEPGQDKEIRGHINYPSRYAQVKNDEQTKLNELDYDDLMKKENLADPKSSRTSYKRGRGNLDYGRRRRWPKKVNGSTKSSRARPNIKYNEKMNQGPRELEQGTQVMGVRGRRTLRKRRAEKGILDEGLLGLGPSSSTQNVDESPKDYIEEWDDEKVDRFMDMEDENMLEDEENGMEDYDNEENINNVQPMDSDEDGHGVGYAQGNWEYGIDDGTSNRWNNGDVGMASDEDVDLSEDYNGTEEGGNDDMEEELDADTSEDSDCSPNRIVNNGGGESAVSDDYSD 1756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23225127 23238909 - Sed0000156.1 Sed14g1489 737207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1489 1756 SMART HOX_1 29 91 IPR001356 GO:0003677(InterPro)
Sed14g1489 1756 Coils Coil 373 475 - -
Sed14g1489 1756 Pfam Homeodomain 30 86 IPR001356 GO:0003677(InterPro)
Sed14g1489 1756 MobiDBLite consensus disorder prediction 16 31 - -
Sed14g1489 1756 MobiDBLite consensus disorder prediction 375 435 - -
Sed14g1489 1756 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677(InterPro)
Sed14g1489 1756 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 935 977 IPR028942 -
Sed14g1489 1756 MobiDBLite consensus disorder prediction 1734 1756 - -
Sed14g1489 1756 MobiDBLite consensus disorder prediction 1664 1756 - -
Sed14g1489 1756 MobiDBLite consensus disorder prediction 1 15 - -
Sed14g1489 1756 MobiDBLite consensus disorder prediction 1514 1556 - -
Sed14g1489 1756 ProSiteProfiles DDT domain profile. 548 607 IPR018501 -
Sed14g1489 1756 SUPERFAMILY Homeodomain-like 22 86 IPR009057 -
Sed14g1489 1756 Gene3D - 21 94 - -
Sed14g1489 1756 MobiDBLite consensus disorder prediction 1 36 - -
Sed14g1489 1756 Pfam DDT domain 549 604 IPR018501 -
Sed14g1489 1756 MobiDBLite consensus disorder prediction 1514 1542 - -
Sed14g1489 1756 MobiDBLite consensus disorder prediction 116 149 - -
Sed14g1489 1756 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1105 1177 IPR028941 -
Sed14g1489 1756 Pfam HB1, ASXL, restriction endonuclease HTH domain 730 797 IPR007759 GO:0006355(InterPro)
Sed14g1489 1756 Coils Coil 985 1005 - -
Sed14g1489 1756 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 4 1756 IPR044977 GO:0006357(InterPro)
Sed14g1489 1756 SMART testlast3 548 607 IPR018501 -
Sed14g1489 1756 ProSiteProfiles HARE-type HTH domain profile. 730 799 IPR007759 GO:0006355(InterPro)
Sed14g1489 1756 MobiDBLite consensus disorder prediction 1701 1731 - -
Sed14g1489 1756 CDD homeodomain 32 86 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g1023 Sed-Chr14:19830429 Sed14g1489 Sed-Chr14:23225127 1.60E-08 dispersed
Sed10g0286 Sed-Chr10:1694668 Sed14g1489 Sed-Chr14:23225127 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40655 PF15613 WSD 2.70E-13 No_clan Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1489 - - - 0.0