Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1489 | ATGGAAACTGGTGCTTCGGACGATGAAAATCTCAATCGGAATGACGATAATATCAACAAAATTAGTAACTCAAGTGAAGGTTTTAGCAAGCCCAAGCGCCAGATGAAGACTCCGTTTCAGCTTGAAACCCTCGAGAAAGCCTTTGCTATGGAGGCGTACCCAACAGAGGCGACGAGGGCTGAACTGTCTGTGAAATTGGGGCTTACTGATCGGCAATTGCAGATGTGGTTCTGTCACAGGAGGTTGAAGGACAAGAAGGCGCCGACACCGGTACCGGCCAAGCCGAAGTTGGTACCGGCGTTGCCTGATTCTCCCCCCATTGATGAATTGAGAGTGGTGGCGGAGCCGGGTAGTGATTATGCTTCGGGGTCGGGCTCGGGTTCGAGTCCGTTCGGGGATGCTGGGTTGCGTAATGTGGGACCTAGAAGTGGTGGAGAAGATATGCCAATGATGAGAAGGTATTATGAACCTTCAAGGTCTGTTATGGAACTTAGAGCTATTGCTTGTGTGGAGTCTCAGTTAGGCGAGCCAGTGAGGGAGGATGGACCTATCCTTGGGATTGAATTTGATCCATTGCCACCTGATGCTTTCGGAACACCTATAGTGGCAGAACAGCAGAAACGATCTGGGCATTCATATGGGGACAAATATGAACATAGGGATGCAAAATCAAATAAAGCGAGTGCAAGGGCATTCCTCGAATATCCATTTATGCCAGACCAGTCTAATATTAGAGCTGATGTGTATGGACCAGTTGCCCAATCGCATTATCCAAATTCATTAGTTGAGGTTTCAGCAGCCAGGACACCATCATTTTTGCTTGGTCATGAACAGTTGAACAGGAGTCACAATTACCATGGCCAGGTTTCAAGAATTCGTCATTTGCCTCAACAGGAGAAGCAGGGAGTTGCAATGTCATCTCCTGCTGAAGATAACGCATTTGTTCCTGCTAGGGATTCTTTTACTAGTATTAGAGCAAATTCTCAATTTACTGATCACCCAATTGTTCGACAAGAAAACGCATATGTGTTGCCAGATGGGAATGTTTATCCTAACGATGTTGGGATTAGGATGGAAAGGAAACACAAGAATGAAGAAGTTCGAATGAACAAAGAAGTTGAAACCCATGAAACAAGAATGCGGAAAGAGCTTGAGAAACAAGATAATTTGAGGAAAAAGAATGAAGAACGAATGAGGAAAGAAATGGAAAAGCAAGATCGTGAAAGAAGGAAAGAAGAGGAGAAGTTAATGCGAGAAAAGCAGCGGGAAGCGGAGAGATTGAAGCGTGAGGAAAGACGTGAACATGAACGAAGGGAGAAGTTTCTGCAGAGGGAGTATTTGAGGGCTGAGAAGAGGAAGCAGAAAGAAGCTATGCGCAAAGAAAAGGAAGCATTAAGACGCAAAGCTGCTATTGAGAAGGCTACTGCTCGTAGAATTGCCCGCGAGTCTATGGAGCTTATTGAGGATGAACAACTTGAATTAATGGAATTGGCAGCTGCAAACAAAGGATTATCCTCCATATTAAATCTTGATCATGACACTTTGCAGAATCTTGAATCTTTCCAAGATTATTTAGGTGCATTTCCACCCAAGTCTGTGCAATTGAAAAAACCTTTCAGCATTCAGCCTTGGATCAATTCAGCGGAAAACATTGGTAACCTTCTCATGGTCTGGAGATTTTTTATTACATTTTCTGATGTGCTAGAGCTATGGCCATTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGACTATGATTCAAGATTATTAGGTGAGATTCACGTTTGTCTTTTGAGACTGATTGTAAAAGATATTGAAGATGTTGCAAGAACACCTGCTGCTGGATTGGGAATGAATCAGAATGGCGTTGCCAACGCTGGAGGTGGTCATCCGCAGATTGTTGAAGGAGCATATGCATGGGGGTTTGACATTTGCAACTGGCAGAAACATTTAAACCCATTAACATGGCCAGAAATATTTCGACAATTAGCACTTTCAGCTGGATTTGGACCTCAGTTGAAGAATAGGAGTTTGGCATGGTCTGAAACGCGTAGCAATGATGAGGCAAAATGTGGCGAGGATGTAGTTTCTACTCTTCGTAATGGTTCAGCAGCTGAAAATGCATTTGCTGTCATGCAAGAGAAAGGATTGTTAGCTCCTCGAAGATCTAGACATCGGCTAACTCCTGGAACTGTCAAGTTTTCTGCTTTTCATGTTCTTTCACTAGAAGGCAGTGAGGGGTTAACAGTACTAGAGCTTGCTGAGAAGATACAGAGGTCTGGACTTCGAGATCTGTCTACAAGCAAAACACCAGAGGCATCCATTTCTGTTGCTTTGACAAGGGATACTAAGCTATTTGAAAGAATAGCTCCTTCCACATATCGTGTACGAGCCCCCTACTGGAAAGATCCAGAGAATGCCGAGGAAATACTTTCAGTAGCCAGAAAGAAAATTCAGGTATTCCAGAATGGGTTTTTGACTGGAGAAGATGCTGATGATGTTGAAAGAGACGAAGAATTTGAATGTGATGATGTTGATGATCTTGAAGTTGATGATGTAGCAACGACATCTTTGGTGAACGAAGATGTTAGCAAAGGAGATATTAACTTGGGTGTTGAGAACGAGAACTTATGTCTTGATAGTACTGGAAATCCACAAAATGAAATTGGCAAAGATATACTGTTCCCCCTCGGTGGTTCCAAGGGCACTAACAATTTAATACCTACAAAACAGTTTGCTGTTGTCGATGAGACTGCTATTAGTGATCTTGATCAAGAAAATATGGAGATTGATGAAAGCAGGGAAGGTGAATCATGGATTCAAGGACTTACAGAAGGTGAATATAATGATCTTAGTGTTGAGGAGCGCCTTGATGCTCTTATTGTCTTAACCAGCATTGCAAATGAAGGAAACTCAATTCGCCTTGTTCTTGAGGATCGCTTGGAAGCTGCAAATGCTGTTAAGAAGCAAATGTTGGCAGAGGCTCAGATTGATAAATCTCGCCTAAAAGAAGAAATCATTACTAAATCTGATTTTCCAATTCACATAGGGAGCAAGGTGGAAACTGAATTCAATGGTTATGCTTTGGAAGGTGGCCAAAGCCCATTACCCGTTGTTTACAATAAGAACAATGAAACGACCCCAAGCACGGCAGAAAACCTCGGTAGTGTGCCTAATGAGAGGGCTACTTTATTGCCAGATCTTTTCCCAGGCCCAGATAACTTTTTGACTCAGCAATGTGGACATGCTTCAAAGAGGTCACGTTTACAGTTAAAATCTTACATTGCTCATAGATCTGAAGAAATGTACACATACAGGTCCTTGCCTCTTGGTCGAGATCGCAGGCGTAATCGATATTGGCAATTTGTTACATCTTCTTCAAGCAATGATCCTGGTTCTGGGAGAATCTTTGTTGAAATGTATGATGGAAAATGGAGGCTTATTGATTCTGAAGAGGGCTTTGATGCTCTTTCAATGGCCTTGGACACCCGTGGGATTAGAGAATCACACCTTCGAATAATGTTGCAGATGATAGAGTCATCATTTAAGGAAAATGTTCGGAGGAATCTGCAGTCTGCCAATGCGATGCTTCAAAGTCGAATTACTTTTAAAAATGAAAATGATGAATCAAGTTCTAGTCCTGACTGTAACGCCAGTTTTAACAGTCCTAGCAGTACTGTTTGCGGTTTAAATTTGGACACAGTTGTTACATCATCTTCATTCAAAATTGAGCTTGGGAGAAATGAAAATGAAAAGATGGCTGCATTTAGAAGGTACCAAGACTTGCAGAGGTGGATGTTAAGAGAGTGCTTTAGCACTTCAACGCTATGGGCCATGAAATTTGGAGAAAAAAGATGCACACCGCTGTTGGGCATTTGTGATTCTTGCTTGTGCTTGTTTGATTCTCAACATTCTCACTGCTCTTCATGCCATCAAAATTTTGGCGCTAGTGGGAACGATATTATTTTTCTGGAACATAAACGTCACTGTGAGAGGGAAAGGAAGTCTAACTACTGGGATACACACGCTTTAGATGCATCTCTTCCCCTTAAATGTAGATTGCTGAAGGCCCTATTAGCTTTCATCGAGGTACATGTTCCATCAGAAGCTTTTCAATTGTTTTGGTCAGAAGAACATAGGAGAGATTGGGGTGTCAGGATGAAATTATCATCATCTATTGAGGAGCTTCTACAGACGTTGACCCTGTTTGAAAGTGCAATTAAGCGAGACTTCCTAAAATCAGACTTTACAACAACAGACGAGCACCTGCGCTCATGTTCCATCTCTGGGAGTGTTACACATGACGCAGCGGATATCGGGTCTGTTCCTACATTACCATGGATTCCACGGACTAGCGCAGCTGTTGCTTTAAGGATTTGTGAGATAGATGCATCAATTTATTATATCGGGTGTGAGAAACCAGAACCTGGCCAGGATAAGGAAATCAGAGGACATATTAACTATCCCAGTAGATATGCCCAGGTTAAGAACGATGAACAGACGAAACTAAACGAACTGGACTATGATGATCTGATGAAAAAAGAAAACTTGGCTGACCCAAAAAGTTCAAGGACCAGCTACAAACGTGGTCGAGGGAATCTGGATTATGGACGTCGTAGAAGGTGGCCGAAAAAAGTTAATGGTTCTACTAAATCTAGCCGTGCACGTCCAAATATCAAGTATAATGAGAAGATGAATCAAGGACCGAGGGAACTGGAGCAAGGAACACAGGTTATGGGGGTACGGGGTCGCCGCACATTGAGGAAGAGAAGGGCTGAGAAGGGCATTCTAGATGAAGGGTTGTTGGGGCTAGGGCCTAGTAGTAGTACTCAGAATGTAGATGAATCTCCAAAAGATTATATTGAGGAATGGGATGATGAAAAAGTGGATAGGTTCATGGATATGGAAGACGAGAATATGTTGGAAGACGAAGAGAACGGCATGGAAGATTACGATAATGAAGAGAACATAAACAATGTACAACCAATGGACTCCGACGAGGATGGCCATGGAGTCGGGTATGCGCAAGGGAATTGGGAGTATGGTATTGATGATGGCACCTCCAACAGATGGAATAATGGTGATGTAGGGATGGCTAGCGACGAAGATGTGGATTTATCTGAGGACTACAATGGAACTGAAGAGGGTGGAAACGATGATATGGAGGAAGAGTTAGATGCCGATACCAGTGAAGACTCGGATTGTTCGCCAAATAGGATAGTCAACAATGGTGGAGGAGAATCCGCCGTTTCCGACGATTATAGCGATTAA | 5271 | 42.86 | METGASDDENLNRNDDNINKISNSSEGFSKPKRQMKTPFQLETLEKAFAMEAYPTEATRAELSVKLGLTDRQLQMWFCHRRLKDKKAPTPVPAKPKLVPALPDSPPIDELRVVAEPGSDYASGSGSGSSPFGDAGLRNVGPRSGGEDMPMMRRYYEPSRSVMELRAIACVESQLGEPVREDGPILGIEFDPLPPDAFGTPIVAEQQKRSGHSYGDKYEHRDAKSNKASARAFLEYPFMPDQSNIRADVYGPVAQSHYPNSLVEVSAARTPSFLLGHEQLNRSHNYHGQVSRIRHLPQQEKQGVAMSSPAEDNAFVPARDSFTSIRANSQFTDHPIVRQENAYVLPDGNVYPNDVGIRMERKHKNEEVRMNKEVETHETRMRKELEKQDNLRKKNEERMRKEMEKQDRERRKEEEKLMREKQREAERLKREERREHERREKFLQREYLRAEKRKQKEAMRKEKEALRRKAAIEKATARRIARESMELIEDEQLELMELAAANKGLSSILNLDHDTLQNLESFQDYLGAFPPKSVQLKKPFSIQPWINSAENIGNLLMVWRFFITFSDVLELWPFTLDEFVQALHDYDSRLLGEIHVCLLRLIVKDIEDVARTPAAGLGMNQNGVANAGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGFGPQLKNRSLAWSETRSNDEAKCGEDVVSTLRNGSAAENAFAVMQEKGLLAPRRSRHRLTPGTVKFSAFHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYWKDPENAEEILSVARKKIQVFQNGFLTGEDADDVERDEEFECDDVDDLEVDDVATTSLVNEDVSKGDINLGVENENLCLDSTGNPQNEIGKDILFPLGGSKGTNNLIPTKQFAVVDETAISDLDQENMEIDESREGESWIQGLTEGEYNDLSVEERLDALIVLTSIANEGNSIRLVLEDRLEAANAVKKQMLAEAQIDKSRLKEEIITKSDFPIHIGSKVETEFNGYALEGGQSPLPVVYNKNNETTPSTAENLGSVPNERATLLPDLFPGPDNFLTQQCGHASKRSRLQLKSYIAHRSEEMYTYRSLPLGRDRRRNRYWQFVTSSSSNDPGSGRIFVEMYDGKWRLIDSEEGFDALSMALDTRGIRESHLRIMLQMIESSFKENVRRNLQSANAMLQSRITFKNENDESSSSPDCNASFNSPSSTVCGLNLDTVVTSSSFKIELGRNENEKMAAFRRYQDLQRWMLRECFSTSTLWAMKFGEKRCTPLLGICDSCLCLFDSQHSHCSSCHQNFGASGNDIIFLEHKRHCERERKSNYWDTHALDASLPLKCRLLKALLAFIEVHVPSEAFQLFWSEEHRRDWGVRMKLSSSIEELLQTLTLFESAIKRDFLKSDFTTTDEHLRSCSISGSVTHDAADIGSVPTLPWIPRTSAAVALRICEIDASIYYIGCEKPEPGQDKEIRGHINYPSRYAQVKNDEQTKLNELDYDDLMKKENLADPKSSRTSYKRGRGNLDYGRRRRWPKKVNGSTKSSRARPNIKYNEKMNQGPRELEQGTQVMGVRGRRTLRKRRAEKGILDEGLLGLGPSSSTQNVDESPKDYIEEWDDEKVDRFMDMEDENMLEDEENGMEDYDNEENINNVQPMDSDEDGHGVGYAQGNWEYGIDDGTSNRWNNGDVGMASDEDVDLSEDYNGTEEGGNDDMEEELDADTSEDSDCSPNRIVNNGGGESAVSDDYSD | 1756 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 23225127 | 23238909 | - | Sed0000156.1 | Sed14g1489 | 737207 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1489 | 1756 | SMART | HOX_1 | 29 | 91 | IPR001356 | GO:0003677(InterPro) | |
Sed14g1489 | 1756 | Coils | Coil | 373 | 475 | - | - | |
Sed14g1489 | 1756 | Pfam | Homeodomain | 30 | 86 | IPR001356 | GO:0003677(InterPro) | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 16 | 31 | - | - | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 375 | 435 | - | - | |
Sed14g1489 | 1756 | ProSiteProfiles | 'Homeobox' domain profile. | 27 | 87 | IPR001356 | GO:0003677(InterPro) | |
Sed14g1489 | 1756 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 935 | 977 | IPR028942 | - | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 1734 | 1756 | - | - | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 1664 | 1756 | - | - | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 1514 | 1556 | - | - | |
Sed14g1489 | 1756 | ProSiteProfiles | DDT domain profile. | 548 | 607 | IPR018501 | - | |
Sed14g1489 | 1756 | SUPERFAMILY | Homeodomain-like | 22 | 86 | IPR009057 | - | |
Sed14g1489 | 1756 | Gene3D | - | 21 | 94 | - | - | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Sed14g1489 | 1756 | Pfam | DDT domain | 549 | 604 | IPR018501 | - | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 1514 | 1542 | - | - | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 116 | 149 | - | - | |
Sed14g1489 | 1756 | Pfam | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | 1105 | 1177 | IPR028941 | - | |
Sed14g1489 | 1756 | Pfam | HB1, ASXL, restriction endonuclease HTH domain | 730 | 797 | IPR007759 | GO:0006355(InterPro) | |
Sed14g1489 | 1756 | Coils | Coil | 985 | 1005 | - | - | |
Sed14g1489 | 1756 | PANTHER | HOMEOBOX-DDT DOMAIN PROTEIN RLT2 | 4 | 1756 | IPR044977 | GO:0006357(InterPro) | |
Sed14g1489 | 1756 | SMART | testlast3 | 548 | 607 | IPR018501 | - | |
Sed14g1489 | 1756 | ProSiteProfiles | HARE-type HTH domain profile. | 730 | 799 | IPR007759 | GO:0006355(InterPro) | |
Sed14g1489 | 1756 | MobiDBLite | consensus disorder prediction | 1701 | 1731 | - | - | |
Sed14g1489 | 1756 | CDD | homeodomain | 32 | 86 | IPR001356 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed14g1023 | Sed-Chr14:19830429 | Sed14g1489 | Sed-Chr14:23225127 | 1.60E-08 | dispersed | |
Sed10g0286 | Sed-Chr10:1694668 | Sed14g1489 | Sed-Chr14:23225127 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
40655 | PF15613 | WSD | 2.70E-13 | No_clan | Sed | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1489 | - | - | - | 0.0 |