Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1490 ATGGTATTATATTTATGCCTAAACCCTAGATTTCTGTTCCTCTTCTTGTTCATCCTCTGTTTTCCCCTGTTTTCATTTTCGCTCAACGAAGATGGTCAAATTCTTCAATCCTTCAAAAACTCCATTGAAGATCACGACAATGTTCTCTTCTCTTGGAACTCCGGTGACCGGAATCCATGTTCGTGGTACGGAATCACCTGCGATGACCGTTTTCAGGTCATTTCGATTGAGCTTCCGAGCTCTCATATTTTTGCCCCTTTTCCCAGTTTCCTCTGTAAGCTTCCTCATCTTCTGTATATGTCTATGTACAATAATTTCTTGCATTCTGTTGTTCCCGATGATATTTCGCTGTGTTCGAATCTTGAGTATCTTGATCTTAGTCAAAATCTTCTCACTGGTTCTTTGCCTTCCGCCATTGGCGATTTGCCGAATCTTCGTTACTTGGATTTGTCTGGGAATAACTTTTCCGGGGAAATACCGCAGAGTTTTTCCCAGTTGCAGAATCTTGAGGCGTTTTCTATTATTTTGAATTTTGTTGGGGGTCCGATTCCTGCGTTTCTTGGAAACCTTTCTAATCTTAGGATGTTGAATCTGTCTTATAATCCGTTTAGTCCTGGGAAAATTCCGGCGGAGTTTGGGAATTTGTCGTATCTTGAGGTTCTTTGGTTGACGAATTGTAATTTGGAGGGGGAGATTCCTGATACGTTGAGGGGGCTTAAGCACCTTGTTCTTCTGGATTTGAGTATGAATAGGCTTAGTGGGTCGTTCCCGGCGGCGTTGACGGAGTTATCCAGCGTGACACAGATTGAGTTGTTTAACAATTCGTTGTCTGGTGTGTTGCCGAAAGGGTTTTCGAAACTCAAGTCATTGCGGATGCTGGACTTGTCGATGAACAAATTAGTTGGGCCGATTCCGGGTGAGTTGTTTGAGTTGCAGCTTGAAAGCCTTAATGTGTTTGAGAATCAGTTCGAGGGCAGCTTGCCGGAATGTATGGGGGCGTCGAGGACTTTGAGAGAGATAAAGCTGTTTGGGAACAGACTATCAGGGGAGTTGCCGAGAGATTTGGGGAGATATTCGCCTTTGAAATCGTTAGACATTTCAGACAACTTCTTTACCGGCCGGCTTCCGGGGGCATTGTGTGAGAAAGGGGTATTGGTAGAGATAATGATGCTCAATAACCTGGTTTCTGGGGAACTCCCGGCGAGTCTCGGTAAATGCCACAGTCTGACCAGGATCCGGTTAGGGAACAACAATTTTTCGGGTTATGTACCAGAAAATTTATGGGGACTTCCAGGTGTTAATCTTCTTGAACTTTCAAACAACTCCTTCTCTGGTCCAATCTCAAAGAAGATAGCTAATTCCAAAAAGTTGAGTTTGCTTCTCATTTCTCATAACAATTTCTCAGGAACTATTCCGGATGAAATTGGCTCTTTGCAGAATATGGTAGATTTTTCTGCCGACCATAACAAGTTCATAGGGAATTTCCCCAAGAGCCTTACGAAATTGAGGCGGCTTGGCAAGTTAGATCTTCAAAACAATATGTTTTCCGGGTTTCTCGGCGACAGGTTTGAGGCCTGGGGGAGGTTGAATGAGCTCAATCTGGCTAATAATAACTTCTCTGGGGAAATACCTCAGGAACTTGCTAGCTTGCCGGTACTCAATTACCTTGATCTTTCAGGCAATCAATTTTCTGGGGGAATCCCAAATGGGTTACAAAATTTGAACCTCAATGTTCTGAATCTATCATACAATAATTTGACTGGGACGCTTCCTTCATACTTTGAGACAGAAGGGTACAAAAAAAGCTTTCTGGGCAATCCTAATTTGTGTAGGGAGGGAAATGGTGCATGTAAACCAATTCAACCGATACGAAAAGAAGCAGGCGACGAAGGAGAAGATTTCACTTGGATGTTGTACGCTGTTCTTATATTGTTGGGTGCACTTTTACTTGCTGGAGTGATTATATTCCACATTCAGTTCAGGAAATACCTCAGGGAAAATAGTCTCAACATCGAATCAAAATGGACGGTGATATCATTCCACAAGGTTTCTTTCAACGAGAACGAGATTGTGGATTCTCTGGATGAAGACAATGTGATAGGCAGTGGAGGCTCTGGCCAAGTTTACAAGGTTGCACTCGGAAATGGCAAAATCATTGCTGTTAAGAAATTTTGGGCTGAGGACCCCAGCGACAGCAAGAGCATTGATCTCGAGAAAAAATGGACTGGAGATGATGTTTTTGATGCAGAAGTGAAGACTTTGAGTAAAATTAGGCATAACAACATAGTAAAACTATGGTGTTGTTGTACCAATGCACACTGCAGGCTTCTGGTCTATGAATACATGCCTAATGGGAGCTTAGGAGATATGCTTCATGGCAGTAAAAGTGAGTTGTTGGATTGGCCAATAAGATACAAAATAGCCTTGGATGTTGCTGAGGGGCTTTCTTATCTTCATCATGACTGTGTGCCTCCAATTGTACACAGAGATGTCAAGTCCAATAACATCTTGTTGGATGCTGACTTTGGAGCTCGAATAGCAGATTTTGGATTAGCCACAACTGTCGATATATCCGAGGATAAATCCAACTCAGTGGTTGCTGGTTCTTGTGGTTATATTGCCCCAGAGCATGCTTATTCATTGAAAGTGAATGCAAAGAGCGACATCTTTAGCTTCGGGATGGTTATTCTCGAACTGATAACAGGCAGGCGCCCAACTGACCCCGAGTTTGACGAAAACGATTTGGTGAAATGGGTATGCACCAAGATAGAACAGAAAGACATCAACCATGTTCTAGACCCCAAATTGGACTCACGTCACCAGGAGGAAATGTTGGAAGTCCTCAACATCGGCCTTCTATGCAGCAGCCCTCTACCTATAAATCGCCCATCGATGAGACAAGTGGTTATATTCTTGGAAGAAGTTCGTACGAGTAGCCATTTGAGGATCGGCAAGAAAGTGGGAAGATTGATACCATACTATTTCGAGGATGCATCGGATAGTGGAAATGGGGTGTAA 3018 43.17 MVLYLCLNPRFLFLFLFILCFPLFSFSLNEDGQILQSFKNSIEDHDNVLFSWNSGDRNPCSWYGITCDDRFQVISIELPSSHIFAPFPSFLCKLPHLLYMSMYNNFLHSVVPDDISLCSNLEYLDLSQNLLTGSLPSAIGDLPNLRYLDLSGNNFSGEIPQSFSQLQNLEAFSIILNFVGGPIPAFLGNLSNLRMLNLSYNPFSPGKIPAEFGNLSYLEVLWLTNCNLEGEIPDTLRGLKHLVLLDLSMNRLSGSFPAALTELSSVTQIELFNNSLSGVLPKGFSKLKSLRMLDLSMNKLVGPIPGELFELQLESLNVFENQFEGSLPECMGASRTLREIKLFGNRLSGELPRDLGRYSPLKSLDISDNFFTGRLPGALCEKGVLVEIMMLNNLVSGELPASLGKCHSLTRIRLGNNNFSGYVPENLWGLPGVNLLELSNNSFSGPISKKIANSKKLSLLLISHNNFSGTIPDEIGSLQNMVDFSADHNKFIGNFPKSLTKLRRLGKLDLQNNMFSGFLGDRFEAWGRLNELNLANNNFSGEIPQELASLPVLNYLDLSGNQFSGGIPNGLQNLNLNVLNLSYNNLTGTLPSYFETEGYKKSFLGNPNLCREGNGACKPIQPIRKEAGDEGEDFTWMLYAVLILLGALLLAGVIIFHIQFRKYLRENSLNIESKWTVISFHKVSFNENEIVDSLDEDNVIGSGGSGQVYKVALGNGKIIAVKKFWAEDPSDSKSIDLEKKWTGDDVFDAEVKTLSKIRHNNIVKLWCCCTNAHCRLLVYEYMPNGSLGDMLHGSKSELLDWPIRYKIALDVAEGLSYLHHDCVPPIVHRDVKSNNILLDADFGARIADFGLATTVDISEDKSNSVVAGSCGYIAPEHAYSLKVNAKSDIFSFGMVILELITGRRPTDPEFDENDLVKWVCTKIEQKDINHVLDPKLDSRHQEEMLEVLNIGLLCSSPLPINRPSMRQVVIFLEEVRTSSHLRIGKKVGRLIPYYFEDASDSGNGV 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23242860 23246523 + Sed0002171.1 Sed14g1490 737208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1490 1005 SUPERFAMILY L domain-like 44 369 - -
Sed14g1490 1005 FunFam Receptor-like protein kinase HSL1 312 619 - -
Sed14g1490 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 28 190 - -
Sed14g1490 1005 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524(InterPro)
Sed14g1490 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1490 1005 FunFam Leucine-rich receptor-like protein kinase family protein 208 306 - -
Sed14g1490 1005 PRINTS Leucine-rich repeat signature 121 134 - -
Sed14g1490 1005 PRINTS Leucine-rich repeat signature 287 300 - -
Sed14g1490 1005 FunFam Leucine-rich repeat receptor-like protein kinase 782 987 - -
Sed14g1490 1005 SUPERFAMILY RNI-like 315 594 - -
Sed14g1490 1005 Pfam Leucine Rich Repeat 408 430 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 Pfam Leucine Rich Repeat 575 595 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 Pfam Leucine Rich Repeat 218 239 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 Pfam Leucine Rich Repeat 361 380 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 Pfam Leucine Rich Repeat 457 478 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 Pfam Leucine Rich Repeat 192 215 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 Pfam Leucine rich repeat 103 155 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 Pfam Leucine rich repeat 503 563 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 Pfam Leucine rich repeat 245 300 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 177 973 - -
Sed14g1490 1005 FunFam Receptor-like protein kinase HSL1 678 781 - -
Sed14g1490 1005 ProSiteProfiles Leucine-rich repeat profile. 144 166 IPR001611 GO:0005515(InterPro)
Sed14g1490 1005 SMART LRR_typ_2 550 573 IPR003591 -
Sed14g1490 1005 SMART LRR_typ_2 263 286 IPR003591 -
Sed14g1490 1005 SMART LRR_typ_2 287 311 IPR003591 -
Sed14g1490 1005 SMART LRR_typ_2 119 141 IPR003591 -
Sed14g1490 1005 SMART LRR_typ_2 502 525 IPR003591 -
Sed14g1490 1005 SMART LRR_typ_2 239 262 IPR003591 -
Sed14g1490 1005 SMART LRR_typ_2 94 118 IPR003591 -
Sed14g1490 1005 SMART LRR_typ_2 190 214 IPR003591 -
Sed14g1490 1005 SMART LRR_typ_2 142 166 IPR003591 -
Sed14g1490 1005 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Sed14g1490 1005 Gene3D Ribonuclease Inhibitor 182 283 IPR032675 -
Sed14g1490 1005 Pfam Protein kinase domain 697 968 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1490 1005 Gene3D Transferase(Phosphotransferase) domain 1 782 988 - -
Sed14g1490 1005 SUPERFAMILY Protein kinase-like (PK-like) 686 972 IPR011009 -
Sed14g1490 1005 SMART serkin_6 694 972 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1490 1005 Gene3D Ribonuclease Inhibitor 284 621 IPR032675 -
Sed14g1490 1005 ProSiteProfiles Protein kinase domain profile. 694 983 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1490 1005 Gene3D Ribonuclease Inhibitor 28 181 IPR032675 -
Sed14g1490 1005 Gene3D Phosphorylase Kinase; domain 1 676 781 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g3257 Sed-Chr4:43067962 Sed14g1490 Sed-Chr14:23242860 7.50E-121 dispersed
Sed07g1793 Sed-Chr7:19547336 Sed14g1490 Sed-Chr14:23242860 2.30E-85 dispersed
Sed10g1929 Sed-Chr10:35970618 Sed14g1490 Sed-Chr14:23242860 6.90E-82 dispersed
Sed14g1490 Sed-Chr14:23242860 Sed14g1705 Sed-Chr14:24919738 1.00E-72 dispersed
Sed12g1816 Sed-Chr12:29364425 Sed14g1490 Sed-Chr14:23242860 4.10E-74 transposed
Sed14g0189 Sed-Chr14:2101758 Sed14g1490 Sed-Chr14:23242860 7.40E-59 transposed
Sed01g2129 Sed-Chr1:16000128 Sed14g1490 Sed-Chr14:23242860 3.90E-141 wgd
Sed14g1490 Sed-Chr14:23242860 Sed08g2241 Sed-Chr8:36104350 1.50E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80207 PF00069 Pkinase 3.60E-43 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1490 - - - 0.0