Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1528 ATGATGTCGAAATCGTATACGAATCTTTTAGATTTAGCTTCTGGGAATTTTCCCATTATGGGTCGTGAGAAGAAACGACTTCCACGAGTAATGACTGTTGCTGGGGTGATATCAGAGCTTGATGATGACCAAGCTAATAGTGTGACTTCGGAGGGACCTTCATCGGTTGTGCAAGACCGTTTAATTATTGTTGCGAATCAGCTTCCGATTAAGGCGAAGCGTAGACCGGATAATAAAGGGTGGAGTTTTAGTTGGGATGAAGATTCTTTGCTGTGGCAGCTCAAGGATGGTTTGCCTGAAGATATGGAGGTTTTGTATGTAGGATCTTTGCGGGTGGATGTGGATTCGAACGAACAAGATGATGTGTCGCAGCTTTTGTTGGAGAGGTTTAAGTGTGTTCCTGCGTTTTTGCCTCATGACATTGTATCTAAATTCTATCATGGTTTTTGTAAGCAGCAATTGTGGCCACTTTTCCATTATATGCTTCCGTTCTCGGCGTCTCATGGTGGTCGGTTTGATCGGTCTCTGTGGGAGGCTTATGTAGCAGCAAATAAAATTTTTTCTCAGAGGGTGATTGAGGTTATAAACCCAGATGATGACTTTGTATGGATTCATGATTACCATTTAATGGTGCTGCCCACATTTTTGAGGAGAAGGTTTACAAGATTGAGAATGGGCTTTTTTCTTCACAGTCCATTTCCTTCCTCAGAAATATACAGGACTTTGCCTGTTAGGGAAGAGATTCTTAAGGCTCTTTTAAATTCAGACCTCATTGGTTTTCATACTTTTGACTATGCACGACATTTCCTATCGTGTTGTAGTCGGATGTTGGGTTTGGAATATCAGTCGAAGAGGGGTTATATTGGGTTGGAGTATTTTGGAAGGACTGTGGGGATAAAGATCATGCCGGTTGGAATTCACATGGGCCAGATGGAGTCAGTGTTAAGACTTGCAGATAACGACTGGAGGGTACAGGAGCTTAAGCGACAATTTGAAGGAAAAGTTGTCTTACTTGGAGTTGATGATATGGACATTTTTAAAGGGGTTAATCTGAAGTTGTTGGCAATGGAACAAATGTTAAGGCAACATCCAAAGTGGCAGGGTCGAGCTGTTTTCGTACAGATAGCTAACCCAGCTAGAGGAAGTGGAAAAGATCTTGAGGAAATACAAGATGAAATACATGAATCCTGCAGGAGAATTAATGAAAGTTTTGGACAGCCAAATTATGAACCAATTGTGTTTATTGATCGGCCTGTTTCTCTCGCCGAAAGAGCTGCGTATTATACTATTGCTGAATGTGTTGTAGTCACCGCAGTGAGGGACGGTATGAACCTAACTCCTTATGAGTATGTTGTCTGCAGGCAGGGAACTGGATCCGATCATAGCACAGAAACAAATGGACCACAAAAAAGCATGCTAGTCATATCAGAGTTCATGGGATGTTCCCCTTCTCTTAGTGGTGCATTACGGGTTAACCCATGGAACATTGAAGCTACTGCCGAAGCATTGAATGAGGCAATATCGATGGCTGATGGCGAGAAGCAATTGCGCCATGAAAAGCATTACAAATACGTGAGTACGCATGATGTGGCATACTGGTCAGGGAGTTTTTTCCAAGATATGGAAAGAGCTTGTAAGGATCACTTCAGAAGACGGTGCTGGGGAATCGGGTTGGGCTTTGGTTTCAGAGTTGTAGCACTTGATCCTAACTTTAGAAAGTTGTCTATTGATGCCATTGTAACTGCATATTCGAAGTCCAAAAGGAGGGCGATACTGATGGATTATGATGGAACGGTCATGCCACAAACTTCAATTGATAAGACCCCAAGTAATCAAGTTATTTCAATCATAGACTCACTTTGTGATGATGTTAGGAATACTGTTTTTGTTGTCAGTGGAAGAGGACGCGAAAGTTTGGGCAACTGGTTTTCTCCTTGCGACAAACTTGGTATTGCTGCAGAGCATGGCTACTTTATGAGGTGGAGTGCTGATAAGGACTGGGAAAATTGTGGTCAAGGTAGTGATTTTGGCTGGATACAGATGGCAGAGCCAGTCATGAAATTATATACAGAAGCTACTGATGGCTCTTCTATTGAAACCAAGGAAAGTGCATTGGTGTGGCACCACCAGGATGCGGACCCTGGTTTCGGTTGCAGCCAGGCCAAGGAACTGTTAGATCACCTTGAAAGCGTGCTCTCAAATGAACCAGTTGCTGTTAAACGTGGTCAGTTTATTGTAGAAGTGAAGCCACAGGGAGTCAGTAAAGGTTTGGTTGCAGAAAAGATCTTTGCGTCAATGGCAGACGCAGGGAGACGAGCCGATTTTGTGCTATGCATTGGTGATGATAGATCTGATGAAGACATGTTTGAGATAATTGGCAATGCAATAACAAGTGGTGTCCTATCTTCCAATACACTAGTTTTTGCATGCACAGTTGGACAGAAACCAAGCAAAGCCAAGTATTACTTGGATGACACAACTGAGGTCATAAATATGCTTGAAGCTCTTGCAGAAGTGTCAGACATTTCTTCTCCCCCAGAATCCCCTTGA 2550 42.9 MMSKSYTNLLDLASGNFPIMGREKKRLPRVMTVAGVISELDDDQANSVTSEGPSSVVQDRLIIVANQLPIKAKRRPDNKGWSFSWDEDSLLWQLKDGLPEDMEVLYVGSLRVDVDSNEQDDVSQLLLERFKCVPAFLPHDIVSKFYHGFCKQQLWPLFHYMLPFSASHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDFVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMGQMESVLRLADNDWRVQELKRQFEGKVVLLGVDDMDIFKGVNLKLLAMEQMLRQHPKWQGRAVFVQIANPARGSGKDLEEIQDEIHESCRRINESFGQPNYEPIVFIDRPVSLAERAAYYTIAECVVVTAVRDGMNLTPYEYVVCRQGTGSDHSTETNGPQKSMLVISEFMGCSPSLSGALRVNPWNIEATAEALNEAISMADGEKQLRHEKHYKYVSTHDVAYWSGSFFQDMERACKDHFRRRCWGIGLGFGFRVVALDPNFRKLSIDAIVTAYSKSKRRAILMDYDGTVMPQTSIDKTPSNQVISIIDSLCDDVRNTVFVVSGRGRESLGNWFSPCDKLGIAAEHGYFMRWSADKDWENCGQGSDFGWIQMAEPVMKLYTEATDGSSIETKESALVWHHQDADPGFGCSQAKELLDHLESVLSNEPVAVKRGQFIVEVKPQGVSKGLVAEKIFASMADAGRRADFVLCIGDDRSDEDMFEIIGNAITSGVLSSNTLVFACTVGQKPSKAKYYLDDTTEVINMLEALAEVSDISSPPESP 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23539662 23544123 + Sed0022858.2 Sed14g1528 737246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1528 849 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 718 848 - -
Sed14g1528 849 Pfam Trehalose-phosphatase 592 826 IPR003337 GO:0005992(InterPro)
Sed14g1528 849 CDD HAD_TPP 590 831 - -
Sed14g1528 849 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 546 - -
Sed14g1528 849 Gene3D - 718 844 IPR023214 -
Sed14g1528 849 Gene3D - 588 702 IPR023214 -
Sed14g1528 849 Gene3D Glycogen Phosphorylase B; 314 526 - -
Sed14g1528 849 Gene3D Glycogen Phosphorylase B; 54 313 - -
Sed14g1528 849 SUPERFAMILY HAD-like 589 837 IPR036412 -
Sed14g1528 849 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 588 705 - -
Sed14g1528 849 FunFam Alpha,alpha-trehalose-phosphate synthase 314 526 - -
Sed14g1528 849 Pfam Glycosyltransferase family 20 60 542 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Sed14g1528 849 CDD GT20_TPS 60 542 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Sed14g1528 849 NCBIfam HAD-IIB family hydrolase 591 797 IPR006379 -
Sed14g1528 849 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 839 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Sed14g1528 849 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Sed14g1528 849 NCBIfam trehalose-phosphatase 586 837 IPR003337 GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0215 Sed-Chr10:1234822 Sed14g1528 Sed-Chr14:23539662 0.00E+00 dispersed
Sed14g1527 Sed-Chr14:23539662 Sed14g1528 Sed-Chr14:23539662 0.00E+00 tandem
Sed14g1528 Sed-Chr14:23539662 Sed14g1529 Sed-Chr14:23539662 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1528 K16055 - csv:101213082 1653.65