Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1536 | ATGGCTGAAATTTCAGGAACAACAAATGGACATGTTTCTTTGAACATCAAACATGAATCCACACCCAATATCACAACAACCATGCAACCAACCAAAGACTGTAGCTCTGTTTTTTTCATTCAAAAGTTGGTTGCAGAAGTTGTGGGGACATATTTCTTAATGTTTGCTGGTGGAGCAGCAGTGATTGTGAATTTGAGCAAAGATAAAGTCATTACTTTCCCTGGGACTGCAATTGTTTGGGGTTTGGCTGTAATGGTTATGGTTTATTCTGTTGGTCATATCTCTGGTGCTCATTTTAACCCTGCTATCACCATTGCCTTTGCTACTACTAAGAGATTTCCAATAAAACAGGTACCAGCATATGTGATAGCTCAAGTTGTTGGCTCAACATTGGCATGTGGGACACTTAGGCTAATATTCAATGGAGAAGAAGAACATTTTGCAGGGACACTCCCAAGTGACTCATATTTGCAGACATTTGTGATTGAATTCATTACCACATTTTACCTCATGTTTGTGGTCTCTGGCGTTTCCACTGACAATAGAGCCATCGGTGAACTTGCTGGACTTGCTGTTGGTGCCACTGTGCTTCTCAATGTCATGCTTGCAGGGCCAATTACAGGGGCATCCATGAACCCAGCCAGAAGCTTGGGACCTGCCATAGTATCAAGGCAATTCAAAGGGATATGGATATACATGGTGGCTCCCATTTTAGGGGCAATTTTAGGGGCTTTGGCCTACAACACCATTAGATTCACAGACAAACCTCTAAGAGAGATCACCAAAAATGCTTCTTTCTTCAAAGTAGGATCACAAACTCCCAATTGA | 828 | 41.91 | MAEISGTTNGHVSLNIKHESTPNITTTMQPTKDCSSVFFIQKLVAEVVGTYFLMFAGGAAVIVNLSKDKVITFPGTAIVWGLAVMVMVYSVGHISGAHFNPAITIAFATTKRFPIKQVPAYVIAQVVGSTLACGTLRLIFNGEEEHFAGTLPSDSYLQTFVIEFITTFYLMFVVSGVSTDNRAIGELAGLAVGATVLLNVMLAGPITGASMNPARSLGPAIVSRQFKGIWIYMVAPILGAILGALAYNTIRFTDKPLREITKNASFFKVGSQTPN | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 23582304 | 23586135 | + | Sed0020518.1 | Sed14g1536 | 737254 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1536 | 275 | Gene3D | Glycerol uptake facilitator protein. | 7 | 263 | IPR023271 | - | |
Sed14g1536 | 275 | PANTHER | AQUAPORIN NIP2-1 | 26 | 255 | IPR034294 | - | |
Sed14g1536 | 275 | NCBIfam | MIP family channel protein | 45 | 247 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed14g1536 | 275 | Pfam | Major intrinsic protein | 35 | 247 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed14g1536 | 275 | SUPERFAMILY | Aquaporin-like | 37 | 261 | IPR023271 | - | |
Sed14g1536 | 275 | CDD | MIP | 41 | 250 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed14g1536 | 275 | ProSitePatterns | MIP family signature. | 98 | 106 | IPR022357 | - | |
Sed14g1536 | 275 | PRINTS | Major intrinsic protein family signature | 193 | 215 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed14g1536 | 275 | PRINTS | Major intrinsic protein family signature | 80 | 104 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed14g1536 | 275 | PRINTS | Major intrinsic protein family signature | 41 | 60 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed14g1536 | 275 | PRINTS | Major intrinsic protein family signature | 117 | 136 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed14g1536 | 275 | PRINTS | Major intrinsic protein family signature | 162 | 180 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed14g1536 | 275 | PRINTS | Major intrinsic protein family signature | 230 | 250 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed06g1358 | Sed-Chr6:37728624 | Sed14g1536 | Sed-Chr14:23582304 | 1.90E-77 | dispersed | |
Sed08g1332 | Sed-Chr8:27656210 | Sed14g1536 | Sed-Chr14:23582304 | 1.20E-55 | dispersed | |
Sed14g1536 | Sed-Chr14:23582304 | Sed14g1537 | Sed-Chr14:23588391 | 3.10E-112 | tandem | |
Sed10g0202 | Sed-Chr10:1175963 | Sed14g1536 | Sed-Chr14:23582304 | 4.00E-120 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1536 | K09874 | - | csv:101219297 | 414.846 |