Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1537 ATGGCTGAAAGTTCAGGATCAAACAATGAACACCACAGTGTTTCTTTGAACATCAAAGATGATTCTGTAGCAGCAGCAGCAGATTGTGTCTCTGTACTTTTCATTCAGAAGTTGATTGCAGAGGTGATGGGGACATATTTCTTGATATTTGCAGGGGAAGCATCAGTGGTGGTGAATTTGAGCAAAGATGGAGTCATCACTTTCCCTGGGATTTCAATTGTTTGGGGTTTGGTTGTAATGGTTATGATCTATTCTCTTGGCCACATCTCTGGTGCTCATTTTAACCCTGCTGTCACCATTGCCTTTGCCATTACCAGAAGATTTCCATGGAAAGAGGTTCTTCCATATTTGGCAGCTCAAGTTATTGGATCAACATTAGCAAGTGGAACACTTCGACTACTATTTAATGGAAAAGAAGACCATTTTCCAGGAACTCTCCCAAGTGACTCATATCTGCAAACCTTTGTGATTGAATTCATAATCACATTTTACCTCATGTTTGTGGTATCTGGTGTTGCCACTGACAATAGAGCAATTGGTGAACTTGCTGGAATCGCAGTTGGCGCTACAGTGCTTCTCAACGTGATGTTTGCAGGGCCAATTACAGGAGCATCAATGAATCCAGCCAGAAGCTTGGGGCCTGCTATAATATTTAAACAATTCAAAGGATTATGGATTTACATGATAGCACCTGTTCTAGGAGCAACATCAGGTGCATTAGTGTATAATACCATCAGGTTCACAGACAAACCTCTACGAGAGATCACTAAAAGTGCCTCGTTCCTCAAGAGTCATTACGGTACCCCATGA 810 41.73 MAESSGSNNEHHSVSLNIKDDSVAAAADCVSVLFIQKLIAEVMGTYFLIFAGEASVVVNLSKDGVITFPGISIVWGLVVMVMIYSLGHISGAHFNPAVTIAFAITRRFPWKEVLPYLAAQVIGSTLASGTLRLLFNGKEDHFPGTLPSDSYLQTFVIEFIITFYLMFVVSGVATDNRAIGELAGIAVGATVLLNVMFAGPITGASMNPARSLGPAIIFKQFKGLWIYMIAPVLGATSGALVYNTIRFTDKPLREITKSASFLKSHYGTP 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23588391 23590438 + Sed0021270.1 Sed14g1537 737255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1537 269 PANTHER AQUAPORIN NIP2-1 16 250 IPR034294 -
Sed14g1537 269 CDD MIP 36 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Sed14g1537 269 Pfam Major intrinsic protein 30 242 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 SUPERFAMILY Aquaporin-like 31 256 IPR023271 -
Sed14g1537 269 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g1537 269 Gene3D Glycerol uptake facilitator protein. 4 257 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g1267 Sed-Chr2:49378203 Sed14g1537 Sed-Chr14:23588391 5.90E-36 dispersed
Sed10g0202 Sed-Chr10:1175963 Sed14g1537 Sed-Chr14:23588391 5.00E-123 dispersed
Sed10g0203 Sed-Chr10:1175963 Sed14g1537 Sed-Chr14:23588391 5.80E-89 dispersed
Sed14g1536 Sed-Chr14:23582304 Sed14g1537 Sed-Chr14:23588391 3.10E-112 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1537 K09874 - csv:101219297 435.647