Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1556 | ATGGAGAAAGAGCCTCTTCTTCCGTACATGAGCCCTAGAGACAAATTCCCTCCTCTTCCTCCTCATCTATGTCCTCTCCCTGAAAATAACGAAATTACCCTTCCAATGACCCCAACCGAGTTCAAAGACCGCTTGATTTTTGGCCCTTGTTCTTCCCCTAAAGACCCTTCTCCCATTTTCGACGCTTTGGCCCTTTCTCGACCCTCAGCCTCATCTTCTCTCCATGATTCATCCACCCTTTCGGACCCGAAATCGCAATCGATTTCGCAACAAAGGATTGTGGATTCCAGTTACTCATGGCACAAAAGCAACCTCCATCGCTCCAAAACCGCGCCGGCCATGGCGGTCATCAACGATGTCGGCAACCCTTCGCAGGTTCCCAAGCCTCAATTTGGTAAACAATCTATAATCCGCCAGGCTGTTGTTCTTCTTGTTGTTTACTTGTCTTTGGGTGTGTTTATCTATTGGATTAATCGTGATAAGTTTTCGGCTACCGAGACTCATCCTGTGGTTGATGCATTCTACTTTTGTATTGTAACCATGTGCACCATTGGGTATGGAGATATCACGCCGAATAGCGCGGCGACGAAGCTGTTTTCGGTTTTGTTTGTGTTGGTGGGGTTTGGGTTTATTGATATATTGCTCTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTGAGGAATGTAAAGAGGGGGGTGGTGGAGCATGAATCTGGGAATTCATATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCATTGGCTTTAGGTGTTGTGATACTTTGTATAGGAGTTGGAATGGGGTTTATGCATTTTATTGAAGACATGGGGTGGTTGGATTCGTTTTATCTTTCAGTCATGTCGGTGACAACGGTTGGATATGGTGATCAGGCATTCAAGTCGATGACTGGTCGTATTTTTGCTTCGATATGGTTGCTTGTATCGACCCTTGCTGTTGCTCGGGCATTTCTTTATTTAGCAGAGGCAAGAGTAGATAAGCGACATAGGATGATGGCGAAATGGATACTTGGCCAGGATATGACTGTCTCTGAGTTTCTTGCTGCTGATACTGACAACAATGGCTTTGTGAGTAGGTCAGAATATGTGGTATTCAAGCTGAAGGAGATGGGCAAGGTATCAGAGAAAGATGTCATGCAGATATCTAATAACTTTGATAGGCTAGACACTGGCAAATGTGGGAAGATTTCACTGGCTGATCTCTTGGCAAGTCATCACTGA | 1269 | 44.6 | MEKEPLLPYMSPRDKFPPLPPHLCPLPENNEITLPMTPTEFKDRLIFGPCSSPKDPSPIFDALALSRPSASSSLHDSSTLSDPKSQSISQQRIVDSSYSWHKSNLHRSKTAPAMAVINDVGNPSQVPKPQFGKQSIIRQAVVLLVVYLSLGVFIYWINRDKFSATETHPVVDAFYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVVEHESGNSYIIDVKKGRMRIRMKVALALGVVILCIGVGMGFMHFIEDMGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADTDNNGFVSRSEYVVFKLKEMGKVSEKDVMQISNNFDRLDTGKCGKISLADLLASHH | 422 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 23749213 | 23756522 | + | Sed0017455.1 | Sed14g1556 | 737274 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1556 | 422 | ProSitePatterns | EF-hand calcium-binding domain. | 366 | 378 | IPR018247 | - | |
Sed14g1556 | 422 | Gene3D | - | 362 | 420 | - | - | |
Sed14g1556 | 422 | PRINTS | Two pore domain K+ channel signature | 300 | 309 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Sed14g1556 | 422 | PRINTS | Two pore domain K+ channel signature | 179 | 207 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Sed14g1556 | 422 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 141 | 369 | IPR003280 | GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER) | |
Sed14g1556 | 422 | Gene3D | - | 129 | 243 | - | - | |
Sed14g1556 | 422 | Gene3D | - | 247 | 356 | - | - | |
Sed14g1556 | 422 | FunFam | Two-pore potassium channel 5 | 125 | 235 | - | - | |
Sed14g1556 | 422 | FunFam | Two-pore potassium channel 3 | 245 | 359 | - | - | |
Sed14g1556 | 422 | SUPERFAMILY | Voltage-gated potassium channels | 252 | 357 | - | - | |
Sed14g1556 | 422 | Pfam | Ion channel | 143 | 222 | IPR013099 | - | |
Sed14g1556 | 422 | Pfam | Ion channel | 269 | 338 | IPR013099 | - | |
Sed14g1556 | 422 | SUPERFAMILY | Voltage-gated potassium channels | 137 | 222 | - | - | |
Sed14g1556 | 422 | SUPERFAMILY | EF-hand | 361 | 418 | IPR011992 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g2744 | Sed-Chr7:42532299 | Sed14g1556 | Sed-Chr14:23749213 | 8.90E-48 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1556 | K05389 | - | csv:101220017 | 689.108 |