Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1562 | ATGGCTGCCTCAACAATGGCTCTCTCTTCCCCATCTCTGGCTGGCCAGGCCATCAAGCTCTCCCCCAATGCCTCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACCGCCGGCAGGAAGCCAGCTCCCTCCAGCTCCGGCAGCCCGTGGTACGGCCCCGACCGTGTCAAGTACTTGGGACCATTCTCTGGCGAGGCACCATCATACCTCACCGGTGAATTCCCTGGCGACTATGGCTGGGACACTGCTGGACTTTCCGCTGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTCTTGGCTGTGTCTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCACAGATCTTCAGCGAGGGAGGATTGGACTACTTGGGAAACTCCAGCTTGGTCCATGCACAGAGCATTTTGGCCATCTGGGCCTGCCAGGTTGTGTTGATGGGTGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGATCACCGACCCCATCTACCCCGGTGGAAGCTTTGACCCGTTGGGTTTGGCTGATGATCCAGAGGCCTTTGCTGAGTTGAAGGTGAAGGAGCTCAAGAATGGAAGACTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAGGCCATTGTTACCGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCAGACCCAGTGAACAACAATGCTTGGGCCTTTGCCACCAACTTTGTCCCTGGAAAGTGA | 807 | 57.25 | MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK | 268 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 23798355 | 23799675 | - | Sed0001377.1 | Sed14g1562 | 737280 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1562 | 268 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 59 | 261 | - | - | |
Sed14g1562 | 268 | MobiDBLite | consensus disorder prediction | 18 | 51 | - | - | |
Sed14g1562 | 268 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 4 | 268 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Sed14g1562 | 268 | MobiDBLite | consensus disorder prediction | 18 | 32 | - | - | |
Sed14g1562 | 268 | Pfam | Chlorophyll A-B binding protein | 68 | 235 | IPR022796 | - | |
Sed14g1562 | 268 | SUPERFAMILY | Chlorophyll a-b binding protein | 51 | 265 | - | - | |
Sed14g1562 | 268 | Gene3D | Chlorophyll a/b binding protein domain | 59 | 261 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g2387 | Sed-Chr1:17929741 | Sed14g1562 | Sed-Chr14:23798355 | 5.10E-53 | dispersed | |
Sed04g3726 | Sed-Chr4:46021408 | Sed14g1562 | Sed-Chr14:23798355 | 2.50E-119 | dispersed | |
Sed05g2091 | Sed-Chr5:34076276 | Sed14g1562 | Sed-Chr14:23798355 | 2.80E-118 | dispersed | |
Sed10g0156 | Sed-Chr10:961812 | Sed14g1562 | Sed-Chr14:23798355 | 8.00E-150 | dispersed | |
Sed10g0157 | Sed-Chr10:965751 | Sed14g1562 | Sed-Chr14:23798355 | 7.50E-148 | dispersed | |
Sed10g1659 | Sed-Chr10:33259814 | Sed14g1562 | Sed-Chr14:23798355 | 1.60E-59 | dispersed | |
Sed13g1162 | Sed-Chr13:14698087 | Sed14g1562 | Sed-Chr14:23798355 | 9.50E-95 | dispersed | |
Sed14g1562 | Sed-Chr14:23798355 | Sed14g1563 | Sed-Chr14:23801374 | 1.40E-154 | tandem | |
Sed10g0155 | Sed-Chr10:959200 | Sed14g1562 | Sed-Chr14:23798355 | 5.70E-148 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1562 | K08912 | - | csv:101213845 | 517.694 |