Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1563 ATGGCTGCCTCAACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCCAGGCCATCAAGCTCTCCCCCAATGCCTCTGAGGTTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACCGCCGGCAGGAAGCCAGCTCCCTCCAGCTCCGGCAGCCCGTGGTATGGCCCCGACCGCGTTAAGTACTTGGGACCATTCTCTGGTGAGGCACCATCATACCTCACCGGTGAATTCCCCGGGGACTACGGCTGGGACACTGCTGGACTTTCCGCCGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTCTTGGCTGTGTCTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCACAGATCTTCAGCGAGGGAGGATTGGACTACTTGGGAAACTCCAGCTTGGTCCATGCTCAGAGCATTTTGGCCATCTGGGCCTGCCAGGTTGTGTTGATGGGTGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCGCTCGGGGAGATCACCGACCCCATCTACCCCGGTGGAAGCTTTGACCCGTTGGGTTTGGCTGATGATCCAGAGGCCTTTGCTGAGTTGAAGGTGAAGGAGCTCAAGAATGGAAGACTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAGGCCATTGTTACCGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCAGACCCAGTGAACAACAATGCTTGGGCATTCGCCACCAACTTTGTTCCTGGAAAGTGA 807 57.37 MAASTMALSSPSLAGQAIKLSPNASEVQGNGRVSMRKTAGRKPAPSSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23801374 23802442 + Sed0026838.1 Sed14g1563 737281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1563 268 FunFam Chlorophyll a-b binding protein, chloroplastic 59 261 - -
Sed14g1563 268 MobiDBLite consensus disorder prediction 18 51 - -
Sed14g1563 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 268 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Sed14g1563 268 MobiDBLite consensus disorder prediction 18 32 - -
Sed14g1563 268 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Sed14g1563 268 SUPERFAMILY Chlorophyll a-b binding protein 51 265 - -
Sed14g1563 268 Gene3D Chlorophyll a/b binding protein domain 59 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g1562 Sed-Chr14:23798355 Sed14g1563 Sed-Chr14:23801374 1.40E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1563 K08912 - csv:101213845 517.694