Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1564 ATGGCTTCTTCGATTGTCATTTTTGTAATAGCTAGTTTTGTTCTAGTTAGAGTTGGATTTGCCCTAGATAATTCAGCCATGGATGTTGAACTGGAAGCTTTAAAGGCTTTCAAGAGTTCGATTCATTTTGATCCATTGGGAGCACTTTCAGATTGGAGGGGTTTTCACCATCATTGCAATTGGTCTGGCATTATCTGTGACTCTGATTCTAAAATGGTCATTTCGATTTCTTTGGTTGATCAGCAGCTTAAAGGCGAGATTTCGCCATTTATTGGGAATCTCTCTGCTCTCCAGGTTCTTGATTTGACTCAGAATTCATTTTCTGGGCAGATTCCAGGTGAGTTGGGTTTGTGTTCCAATCTTTCTGAGCTTACTCTTTACAGAAATTTTCTTTCAGGTCATATTCCACCCCAGTTAGGAAACCTAGGGTTAGTGCAGTATGTTGATTTGGGAGATAACTTTTTAAGAGGAAGCATTCCTGAGAGCATTTGCAATTGCACAAACTTGGTAGGATTTAGTGTGAGCTTTAATAATCTCACTGGCAAAATCCCATCAAACATAGGGAACTTGGTGAATCTTCAAATTCTTCTTGCATATAGCAACAAGAAGTTAGACGGGCCGATTCCTACCTCGATTGGCAAATTAGTTTCACTCCAAGCTCTTGATTTTAGCCAGAATAGCTTGTCTGGGAATATACCAGTGGAGATTGGGAATTTGGTGAATCTAGAGAATCTTTTATTGTTTGAAAATGCTTTGGTGGGGAAAATTCCTAAGGAAATAGGCAAATGTGAGAAGCTTCTTGGTCTGGAACTATACAACAACAAGTTCAGTGGTCCAATTCCTTCACAGCTAGGCTCTCTGGTTCGCTTACAAACCTTGCGTCTGTATAAAAATAGATTGAATTCCACGATACCACAACCTCTCTTTCAATTGAAACGTTTAACCCATTTGCTGCTATCAGAGAATGAGTTAACTGGAACTATATCTTCTGATATTGGATCTCTGAGATCACTACAGATTTTGAATCTTCACTCAAATCGATTCTCTGGAGCGATTCCTTCATCTTTGACAAACTTGTCAAACCTGACTCAATTGTCTCTGAGCTTCAATTTATTCTCTGGAGAGATTCCTTCCAGTATAGGTTTGCTTTATAATCTGAAAAGATTGACATCGAGCGGCAATCTTCTAGTGGGTTCAATTCCATCAAGTATTACCAACTGTACCCAGCTTTCTGTCATTGATCTTTCATTTAATAGACTGACAGGGAAAATACCTCTTGGATTTGGGAAATTGCAGAATCTTTCTTCCTTCTTAATTGGATCAAATAGGCTTTTTGGTGAAATCCCGGACGACCTCTTTGATTGCTCATCTCTTGAGCTTGTAGACCTGTCTTTAAACAATTTCACTGGAGTGTTGAAATCCAGTATCGGCAAGCTTTCCAATATTCAAGTTTTCATGGCAGCAGAAAATTCATTTTCTGGGGAAATTCCTAGGAACATTGGCAACTTAAGCAGGCTCATTACATTGAACCTTGCAGAAAATAAATTTTCAGGTCAAATTCCTGGGGAGTTGTCTAAGCTTTCTCTTCTTCAAGGTCTTTCTTTGCGTGACAATGAATTGGAAGGAAGGATTCCAGAAAAAATATTTAATCTGGAGCAACTGGTTCATCTTCATTTGCAAAACAACAAGTTCACAGGTCCAATTCCAGATACCATCTCAAAACTAGAGTTTCTTTTATATTTGGATCTCCATGGTAACTTTCTTAATGGTTCCATTCCTAAAAGTATGAAAAATCTTCATGGACTTGTGATGTTAGATCTGTCCCACAACCATCTATCTGGATCAATTCCTGGGGTTTTAATCTCAGGCATGAAAAATATGCAACTATACATGAACTTGTCATACAATTTTCTGGTAGGAGGCATTCCAACTGAGCTTGGGCAGTTGCAAATGATACAGTCCATTGACTTCTCAAACAACAATCTCACGGGAAATATTCCCGCAACGCTTGGAGGTTGTAGAAATTTGTTCTCTCTTGATCTTTCAGGAAATGATATTGTTGGTATGCTTCCAGGTAAAACTTTTCTTGGTATGGATGTGCTCACGAATTTGAACCTTTCACGGAACAAAATATCCGGTGAAATCCCGGAAGAGTTGGCAAATCTGGAGCACTTGTACTCTTTGGACCTTTCTCAGAATCAGTTCAACGGCAGCATCCCTCAGAACCTTGCAAAACTTTCTTCTCTGAAGTATGTTAACCTTTCCTTCAATCAACTAGAAGGTCCTGTTCCAGATACCGGAATATTTCATGAAATAAATGTGTCAAGCTTGATAGGAAATCCTTCTCTTTGTGGATCCAAGTTCTTTGCTCCTTGCAGAAAGAACGGTTCGCAACTTCCATTAAAAAAGACCGTACTCATTCTCATAATCCTTGGATCTGTTTCTGTACTTCTAGCTATAATTTTCTTATTTCTAGGCCTCGATCGATATCATAAGCTTAAGAAATCTAAAAGTATTGAGAATCCTGAACCTTCATTGGACTATGCATATACCCTTAAGCGGTTCAATAAGAAGGATATGGAGATTGCAACAGAGTGCTTCAGCGAAAACAACATTCTGGGTTCCAGTACTTTGAGCACTGTCTACAGGGGTCAACTAGAAAGTGGACAGATTGTAGCTGTAAAAAGATTGAACTTGCAATATTTCTCTACAGAATCAGATGATTACTTCAATAGAGAAGTCAAGATTCTTAGTCAAATCAGGCACATAAATTTGGTGAAAGTTCTCGGATATGCTTGGGAAAGCCAGAAACTGAAGGCTATCGTTCTTGGATACATGGAAAATGGGAACTTGGATAGAATAATACATAACCCTGGAACAGAACAACTAAGTTGGACCCTGTCAAAAAGAATTGATATTTGTGTTTCTGTTGCTAGTGGGATGCAATACCTACATCATGGATATGGTTTTCCCATCATTCACTGTGACTTGAAGCCTTCAAACATCCTTCTGGATGGAGACTGGATAGCCCATGTGAGCGATTTTGGAACTGCTAGAGTGTTGGGGGTGCAAAGCCAAGACGCAAGCAACATTTCCTATTCAGAAGCTTTTGAAGGCACTATCGGATATTTGGCTCCAGAGTTCGCGTACATGGGGAAGGTGACAACAAAAGTCGATGTGTTCAGTTTTGGCATAATACTGATGGAATTTCTAACAAAGAAAAGGCCAACTGCAACCTTTGAAGCTCATGGACTCCCAATCAGCCTGCAGCAACTGGTAGAGAGAGCTCTAGCAAATGGAAAGGAAGGGCTTAGTCAAGTTTTGGATCCTGTGTTGGTCTTCAATAATGCAGAGGAGCAAAAGAAGTTAGAAGAACTACTCAAACTAGCACTCTGCTGTACCAACCAAAATCCTGAGAATAGACCTGACATGAATGTAGTTCTGTCCACCCTTCTGAATCTGCAGAGAGATGAAAAGTAG 3480 39.51 MASSIVIFVIASFVLVRVGFALDNSAMDVELEALKAFKSSIHFDPLGALSDWRGFHHHCNWSGIICDSDSKMVISISLVDQQLKGEISPFIGNLSALQVLDLTQNSFSGQIPGELGLCSNLSELTLYRNFLSGHIPPQLGNLGLVQYVDLGDNFLRGSIPESICNCTNLVGFSVSFNNLTGKIPSNIGNLVNLQILLAYSNKKLDGPIPTSIGKLVSLQALDFSQNSLSGNIPVEIGNLVNLENLLLFENALVGKIPKEIGKCEKLLGLELYNNKFSGPIPSQLGSLVRLQTLRLYKNRLNSTIPQPLFQLKRLTHLLLSENELTGTISSDIGSLRSLQILNLHSNRFSGAIPSSLTNLSNLTQLSLSFNLFSGEIPSSIGLLYNLKRLTSSGNLLVGSIPSSITNCTQLSVIDLSFNRLTGKIPLGFGKLQNLSSFLIGSNRLFGEIPDDLFDCSSLELVDLSLNNFTGVLKSSIGKLSNIQVFMAAENSFSGEIPRNIGNLSRLITLNLAENKFSGQIPGELSKLSLLQGLSLRDNELEGRIPEKIFNLEQLVHLHLQNNKFTGPIPDTISKLEFLLYLDLHGNFLNGSIPKSMKNLHGLVMLDLSHNHLSGSIPGVLISGMKNMQLYMNLSYNFLVGGIPTELGQLQMIQSIDFSNNNLTGNIPATLGGCRNLFSLDLSGNDIVGMLPGKTFLGMDVLTNLNLSRNKISGEIPEELANLEHLYSLDLSQNQFNGSIPQNLAKLSSLKYVNLSFNQLEGPVPDTGIFHEINVSSLIGNPSLCGSKFFAPCRKNGSQLPLKKTVLILIILGSVSVLLAIIFLFLGLDRYHKLKKSKSIENPEPSLDYAYTLKRFNKKDMEIATECFSENNILGSSTLSTVYRGQLESGQIVAVKRLNLQYFSTESDDYFNREVKILSQIRHINLVKVLGYAWESQKLKAIVLGYMENGNLDRIIHNPGTEQLSWTLSKRIDICVSVASGMQYLHHGYGFPIIHCDLKPSNILLDGDWIAHVSDFGTARVLGVQSQDASNISYSEAFEGTIGYLAPEFAYMGKVTTKVDVFSFGIILMEFLTKKRPTATFEAHGLPISLQQLVERALANGKEGLSQVLDPVLVFNNAEEQKKLEELLKLALCCTNQNPENRPDMNVVLSTLLNLQRDEK 1159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23802633 23807761 - Sed0021693.1 Sed14g1564 737282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1564 1159 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Sed14g1564 1159 Pfam Leucine rich repeat 690 735 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine rich repeat 553 612 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Protein kinase domain 868 1148 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1564 1159 SUPERFAMILY Protein kinase-like (PK-like) 842 1151 IPR011009 -
Sed14g1564 1159 SMART LRR_typ_2 746 771 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 599 623 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 503 527 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 94 118 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 287 311 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 649 673 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 698 721 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 359 383 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 431 455 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 215 239 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 335 358 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 142 166 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 722 745 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 551 575 IPR003591 -
Sed14g1564 1159 SMART LRR_typ_2 674 697 IPR003591 -
Sed14g1564 1159 Pfam Leucine Rich Repeat 506 527 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 313 335 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 337 359 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 168 190 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 652 673 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 361 381 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 410 431 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 97 116 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 120 142 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 146 166 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 Pfam Leucine Rich Repeat 217 239 IPR001611 GO:0005515(InterPro)
Sed14g1564 1159 CDD STKc_IRAK 873 1154 - -
Sed14g1564 1159 SMART serkin_6 867 1152 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1564 1159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 992 1004 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1564 1159 Gene3D Ribonuclease Inhibitor 314 475 IPR032675 -
Sed14g1564 1159 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 27 184 - -
Sed14g1564 1159 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 829 945 - -
Sed14g1564 1159 SUPERFAMILY RNI-like 401 763 - -
Sed14g1564 1159 ProSiteProfiles Protein kinase domain profile. 867 1154 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1564 1159 Gene3D Transferase(Phosphotransferase) domain 1 946 1159 - -
Sed14g1564 1159 Gene3D Ribonuclease Inhibitor 476 695 IPR032675 -
Sed14g1564 1159 Gene3D Ribonuclease Inhibitor 696 799 IPR032675 -
Sed14g1564 1159 Gene3D Ribonuclease Inhibitor 143 236 IPR032675 -
Sed14g1564 1159 SUPERFAMILY RNI-like 75 397 - -
Sed14g1564 1159 FunFam Predicted protein 473 570 - -
Sed14g1564 1159 PANTHER OS04G0122200 PROTEIN 723 1151 IPR051809 -
Sed14g1564 1159 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 618 796 - -
Sed14g1564 1159 Gene3D Ribonuclease Inhibitor 29 142 IPR032675 -
Sed14g1564 1159 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 946 1159 - -
Sed14g1564 1159 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 241 472 - -
Sed14g1564 1159 Gene3D Phosphorylase Kinase; domain 1 838 945 - -
Sed14g1564 1159 Gene3D Ribonuclease Inhibitor 237 313 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0974 Sed-Chr10:8005818 Sed14g1564 Sed-Chr14:23802633 4.90E-12 dispersed
Sed14g1564 Sed-Chr14:23802633 Sed03g1443 Sed-Chr3:9248057 2.10E-45 dispersed
Sed14g1564 Sed-Chr14:23802633 Sed04g1181 Sed-Chr4:24164520 2.70E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80217 PF00069 Pkinase 1.60E-41 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1564 K13420 - csv:101215973 1801.95