Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1570 ATGCTCCCTACTCTGAATCTAACCGGCGATTACATCTTGGCCGAACGAATTTCAACTCGTTTTGGCAGAGTCGGCGTTGGAGATGTTGTTCTTGTTAGGTCGCCGGAGAACCCTCGTAAAGTAATGGCGAAACGGTTGATGGGTATGGAGGGTGATTCTGTTACCTATGTTGTGGATCCGAAGAATAGTGATTGGTGTGAAACTGTTGTGGTTCCTAAGGGGCATGTTTGGATAGAGGGGGATAATATCTATGATTCAAAGGATTCAAGACAATTTGGGGCTGTCCCATATGGTCTTCTGCAAGGGAAAGTATTCTGGAGGGTATGGCCACCTAAAAGTTTCGGACGGTTGGAGAAGAGAAAATTGGACGAGACAGTCTTGTGA 384 46.09 MLPTLNLTGDYILAERISTRFGRVGVGDVVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDWCETVVVPKGHVWIEGDNIYDSKDSRQFGAVPYGLLQGKVFWRVWPPKSFGRLEKRKLDETVL 127
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23826932 23830057 + Sed0022794.3 Sed14g1570 737288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1570 127 CDD S26_SPase_I 1 104 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Sed14g1570 127 Pfam Signal peptidase, peptidase S26 67 109 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Sed14g1570 127 Pfam Signal peptidase, peptidase S26 1 57 IPR019533 GO:0004252(InterPro)|GO:0006465(InterPro)
Sed14g1570 127 SUPERFAMILY LexA/Signal peptidase 1 117 IPR036286 -
Sed14g1570 127 Gene3D Umud Fragment, subunit A 1 122 - -
Sed14g1570 127 FunFam Inner membrane protease subunit 1 1 116 - -
Sed14g1570 127 PRINTS Bacterial leader peptidase 1 (S26A) family signature 42 54 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Sed14g1570 127 PRINTS Bacterial leader peptidase 1 (S26A) family signature 71 90 IPR000223 GO:0006508(InterPro)|GO:0008236(InterPro)|GO:0016020(InterPro)
Sed14g1570 127 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 119 IPR052064 GO:0006627(PANTHER)|GO:0042720(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g1568 Sed-Chr14:23826932 Sed14g1570 Sed-Chr14:23826932 1.50E-72 dispersed
Sed14g1570 Sed-Chr14:23826932 Sed14g1572 Sed-Chr14:23826932 8.40E-73 dispersed
Sed14g1569 Sed-Chr14:23826932 Sed14g1570 Sed-Chr14:23826932 1.50E-72 tandem
Sed14g1570 Sed-Chr14:23826932 Sed14g1571 Sed-Chr14:23826932 2.60E-42 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1570 K09647 - csv:101209167 231.876